Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_B11
(485 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0209 + 1544347-1544796 39 0.002
01_04_0090 - 15940935-15941438 39 0.002
07_01_0210 + 1555941-1556390 38 0.003
07_01_0208 + 1532691-1533209 38 0.004
02_05_1004 + 33444248-33444847 36 0.013
02_05_1002 + 33426561-33427079 36 0.013
07_01_0211 + 1568646-1568716,1568722-1569085 36 0.017
10_02_0159 + 6020441-6020971 36 0.023
07_01_0959 + 8055700-8055847,8056216-8056529,8057455-8057898 35 0.040
07_01_0958 - 8041483-8042013 35 0.040
07_01_0203 + 1469575-1470045 34 0.053
07_01_0199 - 1420982-1421452 34 0.053
07_01_0195 - 1387831-1388301 34 0.053
07_01_0191 - 1354678-1355148 34 0.053
07_01_0187 - 1321525-1321995 34 0.053
07_01_0204 + 1476517-1477047 33 0.092
02_03_0190 + 16188329-16188514,16188552-16188885,16190275-161907... 33 0.12
07_01_0202 + 1464905-1465423 31 0.49
01_04_0086 + 15916555-15916905,15917236-15917262 31 0.49
12_02_1226 - 27182423-27182768,27182855-27183765 30 0.86
07_01_0212 + 1571631-1572149 29 1.5
02_01_0418 - 3059575-3061279,3061915-3061973,3064270-3064353,306... 29 1.5
07_01_0200 + 1433859-1434377 29 2.0
07_01_0196 + 1400708-1401226 29 2.0
07_01_0192 + 1367558-1368076 29 2.0
07_01_0188 + 1334405-1334923 29 2.0
11_04_0438 - 17737040-17737122,17737373-17737496,17737897-177381... 29 2.6
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 28 3.5
06_03_1067 - 27326167-27326295,27326572-27326656,27326993-273270... 28 3.5
03_02_0383 + 7966929-7968951,7969085-7969104 27 6.0
02_05_1005 - 33445738-33446274 27 6.0
02_05_0263 - 27257150-27259213 27 6.0
02_03_0141 - 15649188-15649274,15649376-15649421,15650476-156506... 27 8.0
>07_01_0209 + 1544347-1544796
Length = 149
Score = 39.1 bits (87), Expect = 0.002
Identities = 32/126 (25%), Positives = 53/126 (42%)
Frame = +2
Query: 107 KDFVNGHNYRRQLLAKGQVSGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGS 286
+DFV+ HN R + G VS WD+ + Q + + +
Sbjct: 10 QDFVDPHNAARADVGVGPVS------------WDDTVAAYAESYAAQRQGDCKLEHSDSG 57
Query: 287 GRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQM 466
G++ GEN++W S +A+ +W +E + Y + S + S GHYTQ+
Sbjct: 58 GKY--GENIFWGSAGGDW---TAASAVSAWVSEKQWYDHGSNSCSAPEGSS--CGHYTQV 110
Query: 467 AWSEST 484
W +ST
Sbjct: 111 VWRDST 116
>01_04_0090 - 15940935-15941438
Length = 167
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 302 GENLYWYST-TDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSE 478
GEN++W S D T +A+ SW +E K Y YA S+ + GHYTQ+ W +
Sbjct: 81 GENIFWGSAGADWT----AADAVRSWVDEKKYYNYA----SNSCAAGKVCGHYTQVVWRD 132
Query: 479 ST 484
ST
Sbjct: 133 ST 134
>07_01_0210 + 1555941-1556390
Length = 149
Score = 38.3 bits (85), Expect = 0.003
Identities = 32/126 (25%), Positives = 51/126 (40%)
Frame = +2
Query: 107 KDFVNGHNYRRQLLAKGQVSGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGS 286
+D+V+ HN R + G VS WD+ + Q + + +
Sbjct: 10 QDYVDAHNAARSDVGVGPVS------------WDDTVAAYAESYAAQRQGDCALEHSDSG 57
Query: 287 GRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQM 466
G++ GEN++W S +A+ SW E + Y + S + GHYTQ+
Sbjct: 58 GKY--GENIFWGSAGGDW---TAASAVSSWVAEKQWYDHD--SNSCSAPAGSSCGHYTQV 110
Query: 467 AWSEST 484
WS ST
Sbjct: 111 VWSNST 116
>07_01_0208 + 1532691-1533209
Length = 172
Score = 37.9 bits (84), Expect = 0.004
Identities = 34/126 (26%), Positives = 52/126 (41%)
Frame = +2
Query: 107 KDFVNGHNYRRQLLAKGQVSGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGS 286
+DFV+ HN A+ VS AA W++ + Q + +
Sbjct: 33 QDFVSPHN-----AARANVSAAAAA-------WNDTVAAYAQSYAAQRQGDCKLVHSDSG 80
Query: 287 GRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQM 466
GR+ GENL+W S + +A+ +W +E + Y + S S GHYTQ+
Sbjct: 81 GRY--GENLFWGSAGGNW---TAASAVSAWVSEKQWYNHT--SNSCSAPSGQSCGHYTQV 133
Query: 467 AWSEST 484
W ST
Sbjct: 134 VWRSST 139
>02_05_1004 + 33444248-33444847
Length = 199
Score = 36.3 bits (80), Expect = 0.013
Identities = 23/96 (23%), Positives = 39/96 (40%)
Frame = +2
Query: 197 MVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVDNAMESW 376
+ W L Q + + G+F GEN++W + +A++ W
Sbjct: 79 LAWSPRLESYARWWAAQRRGDCALRHSFPEGQFALGENIFWGGAGGAW---RPGDAVKDW 135
Query: 377 FNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSEST 484
E DY YA ++ + + GHYTQ+ W +T
Sbjct: 136 AAEGVDYSYA----ANACAAGRECGHYTQIVWRGTT 167
>02_05_1002 + 33426561-33427079
Length = 172
Score = 36.3 bits (80), Expect = 0.013
Identities = 34/117 (29%), Positives = 46/117 (39%)
Frame = +2
Query: 122 GHNYRRQLLAKGQVSGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQT 301
G +YR Q L GQ + AA + +VWDE + + D L
Sbjct: 34 GGDYRMQFL--GQQNAARAAMGLPALVWDERVAGYARWYAESRRG----DCALVHSSGPY 87
Query: 302 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAW 472
GENL+W S T + A+ +W E Y Y S + GHYTQ+ W
Sbjct: 88 GENLFWGSGTG----WSPAQAVGAWLAEQPRYNY--WSNSCYGGM---CGHYTQIMW 135
>07_01_0211 + 1568646-1568716,1568722-1569085
Length = 144
Score = 35.9 bits (79), Expect = 0.017
Identities = 24/94 (25%), Positives = 39/94 (41%)
Frame = +2
Query: 203 WDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVDNAMESWFN 382
WD+ + Q + + + G++ GEN++W S +A+ SW
Sbjct: 25 WDDTVAAYAESYAAQRQGDCALEHSDSGGKY--GENIFWGSAGGDW---TAASAVSSWVA 79
Query: 383 EYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSEST 484
E + Y + S + GHYTQ+ WS ST
Sbjct: 80 EKQWYDHD--SNSCSAPAGSSCGHYTQVVWSNST 111
>10_02_0159 + 6020441-6020971
Length = 176
Score = 35.5 bits (78), Expect = 0.023
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 302 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSES 481
GEN++W S + + +A+ SW E K+Y Y + D K GHYTQ+ W +S
Sbjct: 82 GENIFWGSAGRAW---SAADAVASWVGEKKNYHY---DTNTCDPGKV-CGHYTQVVWRKS 134
>07_01_0959 + 8055700-8055847,8056216-8056529,8057455-8057898
Length = 301
Score = 34.7 bits (76), Expect = 0.040
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 302 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSES 481
GENL+W ++ + + +AM SW E Y + S+ GHYTQ+ WS +
Sbjct: 209 GENLWWGWSSAAGWVGKPADAMGSWVGEKPYYD----RSSNSCVGGKVCGHYTQVVWSRT 264
Query: 482 T 484
T
Sbjct: 265 T 265
>07_01_0958 - 8041483-8042013
Length = 176
Score = 34.7 bits (76), Expect = 0.040
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 302 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSES 481
GENL+W ++ + + +AM SW E Y + S+ GHYTQ+ WS +
Sbjct: 84 GENLWWGWSSTAGWVGKPADAMGSWVGEKPYYD----RSSNKCVGGKVCGHYTQVVWSRT 139
Query: 482 T 484
T
Sbjct: 140 T 140
>07_01_0203 + 1469575-1470045
Length = 156
Score = 34.3 bits (75), Expect = 0.053
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 293 FQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAW 472
+Q GENL W S ++++ W E Y YA S+ GHYTQ+ W
Sbjct: 67 YQYGENLSW---NPSVQAWTAASSVDQWVAEKGSYDYA----SNSCVGGAMCGHYTQVVW 119
Query: 473 SEST 484
++T
Sbjct: 120 RDTT 123
>07_01_0199 - 1420982-1421452
Length = 156
Score = 34.3 bits (75), Expect = 0.053
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 293 FQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAW 472
+Q GENL W S ++++ W E Y YA S+ GHYTQ+ W
Sbjct: 67 YQYGENLSW---NPSVQAWTAASSVDQWVAEKGSYDYA----SNSCVGGAMCGHYTQVVW 119
Query: 473 SEST 484
++T
Sbjct: 120 RDTT 123
>07_01_0195 - 1387831-1388301
Length = 156
Score = 34.3 bits (75), Expect = 0.053
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 293 FQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAW 472
+Q GENL W S ++++ W E Y YA S+ GHYTQ+ W
Sbjct: 67 YQYGENLSW---NPSVQAWTAASSVDQWVAEKGSYDYA----SNSCVGGAMCGHYTQVVW 119
Query: 473 SEST 484
++T
Sbjct: 120 RDTT 123
>07_01_0191 - 1354678-1355148
Length = 156
Score = 34.3 bits (75), Expect = 0.053
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 293 FQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAW 472
+Q GENL W S ++++ W E Y YA S+ GHYTQ+ W
Sbjct: 67 YQYGENLSW---NPSVQAWTAASSVDQWVAEKGSYDYA----SNSCVGGAMCGHYTQVVW 119
Query: 473 SEST 484
++T
Sbjct: 120 RDTT 123
>07_01_0187 - 1321525-1321995
Length = 156
Score = 34.3 bits (75), Expect = 0.053
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 293 FQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAW 472
+Q GENL W S ++++ W E Y YA S+ GHYTQ+ W
Sbjct: 67 YQYGENLSW---NPSVQAWTAASSVDQWVAEKGSYDYA----SNSCVGGAMCGHYTQVVW 119
Query: 473 SEST 484
++T
Sbjct: 120 RDTT 123
>07_01_0204 + 1476517-1477047
Length = 176
Score = 33.5 bits (73), Expect = 0.092
Identities = 31/126 (24%), Positives = 49/126 (38%)
Frame = +2
Query: 107 KDFVNGHNYRRQLLAKGQVSGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGS 286
+DF++ HN R +G+ +G P + E H+ + LG
Sbjct: 30 QDFLDAHNAAR----RGEGAGLPDVAWSTTLQAFAESYVAQLAAATTCSLAHSNSEDLGY 85
Query: 287 GRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQM 466
G ENLY + S+ A+ W E DY Y+ + + + GHYTQ+
Sbjct: 86 G-----ENLYGPAAAGSS-AATAAAAVSKWMEEKADYVYS--SNTCTRGALLECGHYTQV 137
Query: 467 AWSEST 484
W +T
Sbjct: 138 VWRSTT 143
>02_03_0190 +
16188329-16188514,16188552-16188885,16190275-16190745,
16191055-16191249,16191519-16191643,16192082-16192142,
16192774-16193023,16193129-16193279,16193594-16193902
Length = 693
Score = 33.1 bits (72), Expect = 0.12
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 302 GENLYWYSTTDSTYKLNV--DNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWS 475
GE+++W S + N A E F D A + +K K GHYTQM W+
Sbjct: 69 GESIFWGSAGANWTAANAVASWASEKQFYNCSDGSCAGDQGGHSEKQFYKCGHYTQMVWA 128
Query: 476 EST 484
++T
Sbjct: 129 KTT 131
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 359 NAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSEST 484
+A+ SW E K+Y + K + G YTQ+ W+ ST
Sbjct: 244 DALFSWLGEAKNYNCT----GNTCKDGQECGEYTQLMWTNST 281
>07_01_0202 + 1464905-1465423
Length = 172
Score = 31.1 bits (67), Expect = 0.49
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +2
Query: 275 TLGSGRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGH 454
T GSG GENLYW + + +A+ W E Y Y+ + + GH
Sbjct: 79 TSGSGY---GENLYWGPAGKAW---SAADAVGLWMEEKASYVYS--SNTCTKGALLDCGH 130
Query: 455 YTQMAWSEST 484
YTQ+ W +T
Sbjct: 131 YTQIVWRSTT 140
>01_04_0086 + 15916555-15916905,15917236-15917262
Length = 125
Score = 31.1 bits (67), Expect = 0.49
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 284 SGRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYA 406
S R GENL+W S +A++SW E DY YA
Sbjct: 72 SNRNNLGENLFWGSAGGDW---TAASAVQSWVGEKSDYDYA 109
>12_02_1226 - 27182423-27182768,27182855-27183765
Length = 418
Score = 30.3 bits (65), Expect = 0.86
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 302 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSES 481
GEN+ + + T+K VD W +E K Y Y +S+ K+ HYT + W +
Sbjct: 334 GENMMFGTGKQWTWKKTVDE----WSDEKKSYDY----KSNSCKAGAMCTHYTAIVWKNT 385
Query: 482 T 484
T
Sbjct: 386 T 386
>07_01_0212 + 1571631-1572149
Length = 172
Score = 29.5 bits (63), Expect = 1.5
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 302 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYK-YAPLKQSDFDKSKPKIGHYTQMAWSE 478
GENLY+ S ST +A+ SW + D Y + + GHYTQ+ W
Sbjct: 80 GENLYFNSDQSST----AADAVASWVSPTLDGDWYHHDTNTCTAPAGESCGHYTQVVWYN 135
Query: 479 ST 484
ST
Sbjct: 136 ST 137
>02_01_0418 -
3059575-3061279,3061915-3061973,3064270-3064353,
3064395-3064559
Length = 670
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 54 VLDTSIVNLY*TCHANKSKISSTDTIIGDNYWLRVRYQDTLLQ 182
+ + S ++ T HA KS + T IG+N+W V QD ++
Sbjct: 356 ITENSFSDIAKTLHAFKSSRNLTTLFIGENFWGEVIPQDETIE 398
>07_01_0200 + 1433859-1434377
Length = 172
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 302 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSES 481
GENLY ++ +A+ W E DY Y+ + + GHYTQ+ W +
Sbjct: 84 GENLYMGGAGSAS---TAADAVGLWMEEKADYVYS--SNTCTRGALLDCGHYTQVVWRST 138
Query: 482 T 484
T
Sbjct: 139 T 139
>07_01_0196 + 1400708-1401226
Length = 172
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 302 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSES 481
GENLY ++ +A+ W E DY Y+ + + GHYTQ+ W +
Sbjct: 84 GENLYMGGAGSAS---TAADAVGLWMEEKADYVYS--SNTCTRGALLDCGHYTQVVWRST 138
Query: 482 T 484
T
Sbjct: 139 T 139
>07_01_0192 + 1367558-1368076
Length = 172
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 302 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSES 481
GENLY ++ +A+ W E DY Y+ + + GHYTQ+ W +
Sbjct: 84 GENLYMGGAGSAS---TAADAVGLWMEEKADYVYS--SNTCTRGALLDCGHYTQVVWRST 138
Query: 482 T 484
T
Sbjct: 139 T 139
>07_01_0188 + 1334405-1334923
Length = 172
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 302 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSES 481
GENLY ++ +A+ W E DY Y+ + + GHYTQ+ W +
Sbjct: 84 GENLYMGGAGSAS---TAADAVGLWMEEKADYVYS--SNTCTRGALLDCGHYTQVVWRST 138
Query: 482 T 484
T
Sbjct: 139 T 139
>11_04_0438 -
17737040-17737122,17737373-17737496,17737897-17738182,
17738265-17738397,17738742-17738953,17739455-17739816,
17739907-17739937,17744738-17745111
Length = 534
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 299 TGENLYWYSTTDSTYKLNVDNAME-SWFNEYKDYKYAPLKQSDFDKSK 439
T + Y + TD K+ V+ M + N+ D + PLK +FD+SK
Sbjct: 238 TNDKSYTFGFTDQGCKIFVEMFMAVKYVNDLYDDEQIPLKALNFDESK 285
>08_02_0749 -
20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 254 NFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVDNAMESW 376
N NPDK++G + E + T DS +++ AME+W
Sbjct: 406 NASNPDKSVGGLQDAVVETKHSNGTRDSRLHWDLNVAMEAW 446
>06_03_1067 -
27326167-27326295,27326572-27326656,27326993-27327033,
27327274-27327333,27327843-27327962,27328842-27329114,
27329186-27329257,27329798-27329860,27329957-27330139,
27330544-27330660,27330734-27332683,27332770-27332907,
27333003-27333284,27334650-27335522
Length = 1461
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 4 RGNNGRTRASYFGNGRMYWT 63
RG +GR YFG G MYW+
Sbjct: 795 RGLSGRDINQYFGGGVMYWS 814
>03_02_0383 + 7966929-7968951,7969085-7969104
Length = 680
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 329 TDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSE 478
T + K A E W EY D K+ KS+ +IG M W E
Sbjct: 422 TSTERKKTKRRAREWWREEYADELTKKQKRRALAKSRSEIGPMASMQWWE 471
>02_05_1005 - 33445738-33446274
Length = 178
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 359 NAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSEST 484
+A+ +W E + Y Y ++ + + GHY QM W +ST
Sbjct: 109 DAVAAWAEEAQHYDYG----ANACAAGKECGHYKQMMWRDST 146
>02_05_0263 - 27257150-27259213
Length = 687
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 51 YVLDTSIVNLY*TCHANKSKISS 119
Y+L+T IVNLY C A +S +++
Sbjct: 168 YILETCIVNLYTRCGAYQSAVAT 190
>02_03_0141 - 15649188-15649274,15649376-15649421,15650476-15650606,
15652168-15652254,15652470-15652538,15652699-15652845,
15652923-15653003,15653122-15653223,15653392-15653429,
15653590-15653692,15653766-15653888,15654872-15654951,
15655356-15655504,15657794-15658010,15658379-15658448,
15659167-15659313,15659430-15659486,15663270-15663436,
15663479-15663569,15664044-15665081,15665580-15665695,
15666104-15667039,15667108-15667170,15667416-15667970,
15668293-15668305
Length = 1570
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 269 DKTLGSGRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAP 409
D G G + EN Y T D++ L++ + + WF+EY ++ P
Sbjct: 1241 DSPAGVG-YSYSENEDDYVTNDTSRVLDLYDFLSKWFSEYLEFLSNP 1286
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,185,102
Number of Sequences: 37544
Number of extensions: 256499
Number of successful extensions: 506
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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