Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_B10
(583 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode poly... 35 0.048
AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical ... 35 0.048
AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode poly... 34 0.064
AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode poly... 34 0.064
Z37092-6|CAE46667.1| 334|Caenorhabditis elegans Hypothetical pr... 31 0.79
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 30 1.4
Z37092-5|CAA85456.1| 336|Caenorhabditis elegans Hypothetical pr... 29 1.8
U49947-3|AAK68211.1| 114|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z72511-2|CAA96656.1| 413|Caenorhabditis elegans Hypothetical pr... 28 4.2
AF078785-8|AAC27095.1| 658|Caenorhabditis elegans Hypothetical ... 28 4.2
Z82274-5|CAB05227.1| 333|Caenorhabditis elegans Hypothetical pr... 28 5.6
AL117204-21|CAB55157.1| 712|Caenorhabditis elegans Hypothetical... 28 5.6
Z82276-3|CAB05242.1| 106|Caenorhabditis elegans Hypothetical pr... 27 7.4
U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical pr... 27 7.4
AF047655-4|AAC04403.1| 200|Caenorhabditis elegans Hypothetical ... 27 7.4
AC006673-3|AAF39929.1| 861|Caenorhabditis elegans Hypothetical ... 27 7.4
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z93374-1|CAB07554.1| 346|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z74032-1|CAA98465.3| 342|Caenorhabditis elegans Hypothetical pr... 27 9.7
U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like pr... 27 9.7
U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like pr... 27 9.7
U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like pr... 27 9.7
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 27 9.7
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 27 9.7
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 27 9.7
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 27 9.7
AB023496-1|BAA97564.1| 793|Caenorhabditis elegans kinesin like ... 27 9.7
>AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform c
protein.
Length = 1198
Score = 34.7 bits (76), Expect = 0.048
Identities = 26/117 (22%), Positives = 49/117 (41%)
Frame = +1
Query: 232 YGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENLLKRATPYFKRIDDDFRAEWD 411
YG S +F + D L K+ + +Q E K+ ++ + + RAEWD
Sbjct: 25 YGHSSKSFRNRRDNDLHD--WLTAEQKESLKDIAQGTEEFKKKVAVFYNELPAEKRAEWD 82
Query: 412 KFYKEISVDKVFKEFSHTLNEVIHYLAKIIDEVLQGTKPIVDQIIKTFTETSNKILE 582
KFYK + K + +E + + D ++ + + ++ K E + K +E
Sbjct: 83 KFYKTHCFEWTAK--AQGADEETEFQKNLADNDVEKVRQRIGELKKDLDEKARKNVE 137
>AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical
protein Y45G5AM.7 protein.
Length = 433
Score = 34.7 bits (76), Expect = 0.048
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +1
Query: 286 VEGLNDRIKDLGEKSSQDFENLLKRATPYFKRIDDDFRAEWDKFYKEISVDKVFKEFSHT 465
VE L + ++S++ E + K A Y KRI++D R + KE VD ++FS T
Sbjct: 238 VENLKAQFLKERKESTEKIELIQKEAEDYRKRIEEDIRNRQQRHKKE--VDAHQEKFSAT 295
Query: 466 LNE---VIHYLAKIIDEVLQGTKPIVDQIIK 549
+N VI L + + + + DQ+ K
Sbjct: 296 VNHQNAVIEELTQTVKQKQSEIAELKDQLEK 326
>AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode
polyprotein allergen related,post-translationnally
cleaved, the diverse 14.5 kDa cleavageproducts bind
lipids and retinol (164.6 kD) protein.
Length = 1440
Score = 34.3 bits (75), Expect = 0.064
Identities = 19/84 (22%), Positives = 38/84 (45%)
Frame = +1
Query: 331 SQDFENLLKRATPYFKRIDDDFRAEWDKFYKEISVDKVFKEFSHTLNEVIHYLAKIIDEV 510
+Q E K+ ++ + + RAEWDKFYK + K + +E + + D
Sbjct: 50 AQGTEEFKKKVAVFYNELPAEKRAEWDKFYKTHCFEWTAK--AQGADEETEFQKNLADND 107
Query: 511 LQGTKPIVDQIIKTFTETSNKILE 582
++ + + ++ K E + K +E
Sbjct: 108 VEKVRQRIGELKKDLDEKARKNVE 131
>AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform a
protein.
Length = 1440
Score = 34.3 bits (75), Expect = 0.064
Identities = 19/84 (22%), Positives = 38/84 (45%)
Frame = +1
Query: 331 SQDFENLLKRATPYFKRIDDDFRAEWDKFYKEISVDKVFKEFSHTLNEVIHYLAKIIDEV 510
+Q E K+ ++ + + RAEWDKFYK + K + +E + + D
Sbjct: 50 AQGTEEFKKKVAVFYNELPAEKRAEWDKFYKTHCFEWTAK--AQGADEETEFQKNLADND 107
Query: 511 LQGTKPIVDQIIKTFTETSNKILE 582
++ + + ++ K E + K +E
Sbjct: 108 VEKVRQRIGELKKDLDEKARKNVE 131
>Z37092-6|CAE46667.1| 334|Caenorhabditis elegans Hypothetical
protein F44F4.5b protein.
Length = 334
Score = 30.7 bits (66), Expect = 0.79
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 89 ESGCKFTVVAHLVQKNVLTSVRISFYLAARRT*LMALYSLKIIPLNLN 232
E G +F V ++ L S RI Y+AA + + LYS ++ L L+
Sbjct: 220 EKGTRFYVTQRYQKREALISTRIISYIAASQFLGLTLYSTMVLTLRLH 267
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 403 EWDKFYKEISVDKVFKEFSHTLNEVIHYLAKIIDEVLQGTKPIVDQIIKTFTET 564
E+DKFY E + E LNE+I +I+D++L + + IKT + T
Sbjct: 765 EFDKFYIECDGNNEGVECLRLLNEIISDFDQILDQILDREEFKKIEKIKTISTT 818
>Z37092-5|CAA85456.1| 336|Caenorhabditis elegans Hypothetical
protein F44F4.5a protein.
Length = 336
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 89 ESGCK--FTVVAHLVQKNVLTSVRISFYLAARRT*LMALYSLKIIPLNLN 232
E GC+ F V ++ L S RI Y+AA + + LYS ++ L L+
Sbjct: 220 EKGCRTRFYVTQRYQKREALISTRIISYIAASQFLGLTLYSTMVLTLRLH 269
>U49947-3|AAK68211.1| 114|Caenorhabditis elegans Hypothetical
protein C30G4.7 protein.
Length = 114
Score = 29.1 bits (62), Expect = 2.4
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 187 AHGALFLKDNTIKSEYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQ-DFEN-LLKR 360
AH L + DN I+ K HLM V+++V+GL +I DL + + EN +LKR
Sbjct: 45 AHNVLNI-DNKIEQAMDLVK---THLMFAVREEVDGLRGKIFDLENHVRRLEAENSILKR 100
Query: 361 ATP 369
P
Sbjct: 101 TIP 103
>Z72511-2|CAA96656.1| 413|Caenorhabditis elegans Hypothetical
protein F55A11.2 protein.
Length = 413
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 244 KDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENL 351
+ +HL + VK D+ GLN +I L E S + N+
Sbjct: 181 RSQIDHLSSIVKSDITGLNKQIGQLQEFSKRRAGNM 216
>AF078785-8|AAC27095.1| 658|Caenorhabditis elegans Hypothetical
protein C04E12.10 protein.
Length = 658
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 127 TEKRADISADLILSGSKKNIAHGALFLKDNTIKSEYGASKDNFNH 261
TE D+ + +L+ +++IA G + K+N +K Y + D ++H
Sbjct: 459 TESNQDVVSTPLLTWREEHIALGPMS-KENHVKFTYDVTSDTYSH 502
>Z82274-5|CAB05227.1| 333|Caenorhabditis elegans Hypothetical
protein JC8.7 protein.
Length = 333
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 162 NEIRTDVSTFFCTRCATTVNLQPDSSVVNSKYWKSF 55
NEIR + F CTRC+ ++ S NSK F
Sbjct: 141 NEIRHAILDF-CTRCSKCIDCSAKSKAANSKIQSFF 175
>AL117204-21|CAB55157.1| 712|Caenorhabditis elegans Hypothetical
protein Y116A8C.33 protein.
Length = 712
Score = 27.9 bits (59), Expect = 5.6
Identities = 25/97 (25%), Positives = 41/97 (42%)
Frame = +1
Query: 286 VEGLNDRIKDLGEKSSQDFENLLKRATPYFKRIDDDFRAEWDKFYKEISVDKVFKEFSHT 465
V L DRIK + K F+NL K K +F+ DK E+ V K+ +
Sbjct: 455 VNELRDRIKAIDYKEIFIFQNLSKAIEEKLK--SQEFK---DKISSELEVHNCLKKLKNN 509
Query: 466 LNEVIHYLAKIIDEVLQGTKPIVDQIIKTFTETSNKI 576
VI + +I ++ V QI ++ S+++
Sbjct: 510 SEAVIR-MVPLIQAFMRADLQNVQQIAPLVSKFSHEL 545
>Z82276-3|CAB05242.1| 106|Caenorhabditis elegans Hypothetical
protein K03D3.5 protein.
Length = 106
Score = 27.5 bits (58), Expect = 7.4
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +1
Query: 118 TPGTEKRADISADLILSGSKKNIAHGALFLKD--NTIKSEYGASKDNFNHLMTTVKKDVE 291
TP R + A L+ +G KKN+A + L++ NT + AS N T K E
Sbjct: 20 TPAAPSRESVVAGLVANGLKKNLAEKIIELREKYNTEIIKANAS-GNQKLAQATWNKHQE 78
Query: 292 GLNDRIKDLGEKSSQDFENLLKRATPYF 375
+ + ++ +E L K+ YF
Sbjct: 79 LYHKLFAKVTKEQKAIYEKLNKQYHLYF 106
>U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical
protein C24A3.1 protein.
Length = 638
Score = 27.5 bits (58), Expect = 7.4
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +1
Query: 178 KNIAHGALFLKDNTIKSEYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENLLK 357
K G L+D I+ + A +D N+L D E LN+ + L +K + + K
Sbjct: 234 KTAGDGIQRLQD-MIRQQDLARQDIMNNLSKKGDVDKEKLNEETRRLNDKINLITSEVTK 292
Query: 358 RATPYFKRIDDDFRA 402
+ T ++ DDF +
Sbjct: 293 KMTENQQKAKDDFNS 307
>AF047655-4|AAC04403.1| 200|Caenorhabditis elegans Hypothetical
protein C17B7.9 protein.
Length = 200
Score = 27.5 bits (58), Expect = 7.4
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Frame = +1
Query: 148 SADLILSGSKKNIAHGALFLKDNTIKSEYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEK 327
S DL+L+ +N G L++KD EY KD +++++ K ++ L GEK
Sbjct: 41 SCDLVLADFLEN--SGNLYMKDKKRLKEY---KDECHNVLSCYNK-IKCLGTN----GEK 90
Query: 328 SSQDFENLLK--RATPY----FKRIDDDFRA-------EWDKFYKEISVDKVFKEFSHTL 468
+N+ K RAT Y F + D A +WD +++ +KV K+F +
Sbjct: 91 IPA-IKNIGKHCRATDYVHDDFAKCSDKLNAKKSTCFDDWDPIPNKVTTEKVPKKFDQLM 149
Query: 469 NE 474
+E
Sbjct: 150 SE 151
>AC006673-3|AAF39929.1| 861|Caenorhabditis elegans Hypothetical
protein K09D9.11 protein.
Length = 861
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/35 (28%), Positives = 23/35 (65%)
Frame = +1
Query: 265 MTTVKKDVEGLNDRIKDLGEKSSQDFENLLKRATP 369
+TT++ + E L ++++G+K+S++ +L TP
Sbjct: 255 VTTIQNNTENLEKTVRNVGQKNSKNDSLVLSLQTP 289
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 2 HEGVCLLEGNVVQIKTLMKD--FQYFEFTTEESGCKFTVVAH 121
HE V L G VQ+K + + + E+T +SG KFT+ H
Sbjct: 2670 HELVDLGGGQQVQVKVVRGEGGVEKGEYTDPKSGMKFTIQMH 2711
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 2 HEGVCLLEGNVVQIKTLMKD--FQYFEFTTEESGCKFTVVAH 121
HE V L G VQ+K + + + E+T +SG KFT+ H
Sbjct: 2682 HELVDLGGGQQVQVKVVRGEGGVEKGEYTDPKSGMKFTIQMH 2723
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 2 HEGVCLLEGNVVQIKTLMKD--FQYFEFTTEESGCKFTVVAH 121
HE V L G VQ+K + + + E+T +SG KFT+ H
Sbjct: 2568 HELVDLGGGQQVQVKVVRGEGGVEKGEYTDPKSGMKFTIQMH 2609
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 2 HEGVCLLEGNVVQIKTLMKD--FQYFEFTTEESGCKFTVVAH 121
HE V L G VQ+K + + + E+T +SG KFT+ H
Sbjct: 2569 HELVDLGGGQQVQVKVVRGEGGVEKGEYTDPKSGMKFTIQMH 2610
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 2 HEGVCLLEGNVVQIKTLMKD--FQYFEFTTEESGCKFTVVAH 121
HE V L G VQ+K + + + E+T +SG KFT+ H
Sbjct: 2651 HELVDLGGGQQVQVKVVRGEGGVEKGEYTDPKSGMKFTIQMH 2692
>Z93374-1|CAB07554.1| 346|Caenorhabditis elegans Hypothetical
protein C06C6.2 protein.
Length = 346
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +2
Query: 77 FTTEESGCKFTVVAHLVQKNVLTSVRISFYLAARRT*LMALYSLKIIPLNLNTVPLRTIS 256
F +E F + ++LV K+++TS + + + AL S +IP+ +PL I
Sbjct: 207 FGSESLMLYFALKSYLVTKSLMTSAYSANFQKLQWQLFYALVSQAVIPIFFMQIPLSAIY 266
Query: 257 I 259
I
Sbjct: 267 I 267
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 2 HEGVCLLEGNVVQIKTLMKD--FQYFEFTTEESGCKFTVVAH 121
HE V L G VQ+K + + + E+T +SG KFT+ H
Sbjct: 2670 HELVDLGGGQQVQVKVVRGEGGVEKGEYTDPKSGMKFTIQMH 2711
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 2 HEGVCLLEGNVVQIKTLMKD--FQYFEFTTEESGCKFTVVAH 121
HE V L G VQ+K + + + E+T +SG KFT+ H
Sbjct: 2682 HELVDLGGGQQVQVKVVRGEGGVEKGEYTDPKSGMKFTIQMH 2723
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 2 HEGVCLLEGNVVQIKTLMKD--FQYFEFTTEESGCKFTVVAH 121
HE V L G VQ+K + + + E+T +SG KFT+ H
Sbjct: 2568 HELVDLGGGQQVQVKVVRGEGGVEKGEYTDPKSGMKFTIQMH 2609
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 2 HEGVCLLEGNVVQIKTLMKD--FQYFEFTTEESGCKFTVVAH 121
HE V L G VQ+K + + + E+T +SG KFT+ H
Sbjct: 2569 HELVDLGGGQQVQVKVVRGEGGVEKGEYTDPKSGMKFTIQMH 2610
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 2 HEGVCLLEGNVVQIKTLMKD--FQYFEFTTEESGCKFTVVAH 121
HE V L G VQ+K + + + E+T +SG KFT+ H
Sbjct: 2651 HELVDLGGGQQVQVKVVRGEGGVEKGEYTDPKSGMKFTIQMH 2692
>Z74032-1|CAA98465.3| 342|Caenorhabditis elegans Hypothetical
protein F35B12.2 protein.
Length = 342
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 337 DFENLLKRATPYFKRIDDDFRAEWDKFYKEISVDKVFKEFSHTLNEVIHYL 489
D + +LKR + +IDD+ R E+ + +K K + IHY+
Sbjct: 229 DEQAMLKRVDHVWTQIDDETRTEYGETFKNYFAKMWNKTYISMSTTKIHYV 279
>U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform c protein.
Length = 1576
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 418 YKEISVDKVFKEFSHTLNEVIHYLAKIIDEV 510
Y+E +DK+ K++SH L +YL +D +
Sbjct: 1132 YQEEDLDKIRKQWSHALKSRQYYLQHQLDSL 1162
>U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform b protein.
Length = 1610
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 418 YKEISVDKVFKEFSHTLNEVIHYLAKIIDEV 510
Y+E +DK+ K++SH L +YL +D +
Sbjct: 1132 YQEEDLDKIRKQWSHALKSRQYYLQHQLDSL 1162
>U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform a protein.
Length = 1595
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 418 YKEISVDKVFKEFSHTLNEVIHYLAKIIDEV 510
Y+E +DK+ K++SH L +YL +D +
Sbjct: 1132 YQEEDLDKIRKQWSHALKSRQYYLQHQLDSL 1162
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 2 HEGVCLLEGNVVQIKTLMKD--FQYFEFTTEESGCKFTVVAH 121
HE V L G VQ+K + + + E+T +SG KFT+ H
Sbjct: 2682 HELVDLGGGQQVQVKVVRGEGGVEKGEYTDPKSGMKFTIQMH 2723
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 2 HEGVCLLEGNVVQIKTLMKD--FQYFEFTTEESGCKFTVVAH 121
HE V L G VQ+K + + + E+T +SG KFT+ H
Sbjct: 2682 HELVDLGGGQQVQVKVVRGEGGVEKGEYTDPKSGMKFTIQMH 2723
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 2 HEGVCLLEGNVVQIKTLMKD--FQYFEFTTEESGCKFTVVAH 121
HE V L G VQ+K + + + E+T +SG KFT+ H
Sbjct: 2682 HELVDLGGGQQVQVKVVRGEGGVEKGEYTDPKSGMKFTIQMH 2723
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +1
Query: 373 FKRIDDDFRAEWDKFYKEISVDKVFKEFSHTLNEVIHYLAKIIDEVLQGTKPIVDQIIKT 552
F I D + ++++ + E +DK+ E LN HY+ G + +Q I+
Sbjct: 319 FYHIQRDQKRQYEEKFAEEELDKIPFEVKKNLNIYFHYII--------GRRTTDNQKIED 370
Query: 553 FTETSN 570
F +TSN
Sbjct: 371 FIQTSN 376
>AB023496-1|BAA97564.1| 793|Caenorhabditis elegans kinesin like
protein KLP-4 protein.
Length = 793
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 418 YKEISVDKVFKEFSHTLNEVIHYLAKIIDEV 510
Y+E +DK+ K++SH L +YL +D +
Sbjct: 552 YQEEDLDKIRKQWSHALKSRQYYLQHQLDSL 582
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,211,240
Number of Sequences: 27780
Number of extensions: 269106
Number of successful extensions: 983
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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