Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_B08
         (510 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   1.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.2  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   4.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   5.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   9.8  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -2

Query: 482 SISEVSASLNSFAVSCWGVRENECKTAGPLAV 387
           S S+ S  + S   SC      E KTAG LAV
Sbjct: 279 STSKKSGIVRSHQQSCINRVARETKTAGTLAV 310


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 175 EGDGAQMIQDDESSTMDEDMGGGEGVA 255
           +G+GA    DDE +  +ED G G+  A
Sbjct: 273 DGEGADDRDDDEENEEEED-GRGQSEA 298


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +1

Query: 340 GDISSSGQTETPLISS-TANGPAVLHSFSLTPQQETANEFNDADTSEIECAADTMPTV 510
           G  SS+  T +   S  +A  P+V  S  +     T+N+ +  D S ++ ++D+  T+
Sbjct: 179 GTASSTSSTASSRNSDRSAGSPSVSESDEVDVIGYTSNQSDTDDHSSVQSSSDSGVTM 236


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 197 FKMMNQVQWMRIWGVGKESP 256
           FK+++     R+WG+ K  P
Sbjct: 488 FKLVDSKAVSRLWGLHKNKP 507


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 88  PNFALSLKGPDFPCPEENYLLWLPVLYL 5
           P   L +KG    CPE + +L++   +L
Sbjct: 370 PAEGLEMKGQMVHCPESDSILFVSSPFL 397


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.298    0.118    0.311 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,061
Number of Sequences: 438
Number of extensions: 2502
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (20.7 bits)