Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_B05
(492 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 230 9e-61
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 230 9e-61
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 230 9e-61
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 230 9e-61
AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p pro... 47 1e-05
AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA... 47 1e-05
AE014134-2321|AAF53275.1| 1413|Drosophila melanogaster CG6108-PA... 30 2.0
AE014298-2144|AAN09666.2| 1453|Drosophila melanogaster CG9176-PC... 29 4.5
AE014298-2143|AAF48450.3| 1853|Drosophila melanogaster CG9176-PB... 29 4.5
AB030577-1|BAA89278.1| 1463|Drosophila melanogaster CNG channel-... 29 4.5
BT011174-1|AAR88535.1| 669|Drosophila melanogaster RH24371p pro... 28 6.0
AE014296-3355|AAF51591.1| 669|Drosophila melanogaster CG13248-P... 28 6.0
AY060485-1|AAL25524.1| 696|Drosophila melanogaster SD09360p pro... 28 7.9
AE014298-2787|AAF48900.2| 2030|Drosophila melanogaster CG32542-P... 28 7.9
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 230 bits (562), Expect = 9e-61
Identities = 105/137 (76%), Positives = 121/137 (88%)
Frame = +3
Query: 81 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 260
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 261 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 440
MRKAI+ HLE NP LEKLLPHIKGNVGFVFT+GDL +VRDKLLE+KV+APARPGAIAPL
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120
Query: 441 VVIPGHYTGLGP*KTSF 491
V+IP TGLGP KTSF
Sbjct: 121 VIIPAQNTGLGPEKTSF 137
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 230 bits (562), Expect = 9e-61
Identities = 105/137 (76%), Positives = 121/137 (88%)
Frame = +3
Query: 81 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 260
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 261 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 440
MRKAI+ HLE NP LEKLLPHIKGNVGFVFT+GDL +VRDKLLE+KV+APARPGAIAPL
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120
Query: 441 VVIPGHYTGLGP*KTSF 491
V+IP TGLGP KTSF
Sbjct: 121 VIIPAQNTGLGPEKTSF 137
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 230 bits (562), Expect = 9e-61
Identities = 105/137 (76%), Positives = 121/137 (88%)
Frame = +3
Query: 81 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 260
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 261 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 440
MRKAI+ HLE NP LEKLLPHIKGNVGFVFT+GDL +VRDKLLE+KV+APARPGAIAPL
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120
Query: 441 VVIPGHYTGLGP*KTSF 491
V+IP TGLGP KTSF
Sbjct: 121 VIIPAQNTGLGPEKTSF 137
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 230 bits (562), Expect = 9e-61
Identities = 105/137 (76%), Positives = 121/137 (88%)
Frame = +3
Query: 81 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 260
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 261 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 440
MRKAI+ HLE NP LEKLLPHIKGNVGFVFT+GDL +VRDKLLE+KV+APARPGAIAPL
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120
Query: 441 VVIPGHYTGLGP*KTSF 491
V+IP TGLGP KTSF
Sbjct: 121 VIIPAQNTGLGPEKTSF 137
>AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p
protein.
Length = 256
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +3
Query: 105 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--K 278
WK I + +YP F+ N+ + ++ +R L+ +S + GKN +M+ +
Sbjct: 22 WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81
Query: 279 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 452
E P L KL + G VG +FT +V + AR G +A +V +P
Sbjct: 82 KSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTLP 139
>AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA
protein.
Length = 256
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +3
Query: 105 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--K 278
WK I + +YP F+ N+ + ++ +R L+ +S + GKN +M+ +
Sbjct: 22 WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81
Query: 279 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 452
E P L KL + G VG +FT +V + AR G +A +V +P
Sbjct: 82 KSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTLP 139
>AE014134-2321|AAF53275.1| 1413|Drosophila melanogaster CG6108-PA
protein.
Length = 1413
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -2
Query: 395 VLQQFITHINKISTGEDKANISLDVRKQF 309
VL Q + +INKI++G +AN+S ++K +
Sbjct: 162 VLSQRLANINKIASGNTQANLSKQLQKNY 190
>AE014298-2144|AAN09666.2| 1453|Drosophila melanogaster CG9176-PC,
isoform C protein.
Length = 1453
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 137 TVGRIPKMFHSGCGQCRLATDATDPYFIAWSQ-HCAHGQKHHDEESHQGPS*NKSSSRK 310
T+GR ++ C + A +D A++ H H Q HH + HQ S S+S+K
Sbjct: 553 TLGR-KRLMEVRCVNKKYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSDSSENSASKK 610
>AE014298-2143|AAF48450.3| 1853|Drosophila melanogaster CG9176-PB,
isoform B protein.
Length = 1853
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 137 TVGRIPKMFHSGCGQCRLATDATDPYFIAWSQ-HCAHGQKHHDEESHQGPS*NKSSSRK 310
T+GR ++ C + A +D A++ H H Q HH + HQ S S+S+K
Sbjct: 553 TLGR-KRLMEVRCVNKKYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSDSSENSASKK 610
>AB030577-1|BAA89278.1| 1463|Drosophila melanogaster CNG
channel-like protein.
Length = 1463
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 137 TVGRIPKMFHSGCGQCRLATDATDPYFIAWSQ-HCAHGQKHHDEESHQGPS*NKSSSRK 310
T+GR ++ C + A +D A++ H H Q HH + HQ S S+S+K
Sbjct: 553 TLGR-KRLMEVRCVNKKYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSDSSENSASKK 610
>BT011174-1|AAR88535.1| 669|Drosophila melanogaster RH24371p
protein.
Length = 669
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 391 RTKSKPRLVLE-PLLHCLSSFPVITLGL 471
RTKS P V+E PL CL++F + LG+
Sbjct: 22 RTKSVPTDVMETPLNRCLNTFDIALLGI 49
>AE014296-3355|AAF51591.1| 669|Drosophila melanogaster CG13248-PA
protein.
Length = 669
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 391 RTKSKPRLVLE-PLLHCLSSFPVITLGL 471
RTKS P V+E PL CL++F + LG+
Sbjct: 22 RTKSVPTDVMETPLNRCLNTFDIALLGI 49
>AY060485-1|AAL25524.1| 696|Drosophila melanogaster SD09360p
protein.
Length = 696
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 7 GPHRGL--CVFVLSLNFSEVPTSLNPRWVGRT 96
GPHR L C F L L + ++P W+ RT
Sbjct: 32 GPHRALHMCAFQLGLYALGLHNCVSPNWLSRT 63
>AE014298-2787|AAF48900.2| 2030|Drosophila melanogaster CG32542-PA
protein.
Length = 2030
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 7 GPHRGL--CVFVLSLNFSEVPTSLNPRWVGRT 96
GPHR L C F L L + ++P W+ RT
Sbjct: 1366 GPHRALHMCAFQLGLYALGLHNCVSPNWLSRT 1397
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,615,124
Number of Sequences: 53049
Number of extensions: 574446
Number of successful extensions: 2392
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2392
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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