Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_B04
         (507 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   257   1e-70
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           27   0.48 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.1  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    24   2.6  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           24   3.4  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   3.4  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   5.9  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   5.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.9  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           23   7.9  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   7.9  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   7.9  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  257 bits (630), Expect = 1e-70
 Identities = 115/167 (68%), Positives = 133/167 (79%)
 Frame = +3

Query: 6   RVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDV 185
           +VGLTNYAAAYCTG             D+LY G T+VTG+EY VEPVD GP AFRCYLDV
Sbjct: 89  KVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDV 148

Query: 186 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 365
           GLARTTTG+RVFGAMKGAVDGGLN+PHS+KRFPGY AE+K FNAE+HR HIFGLHVA YM
Sbjct: 149 GLARTTTGSRVFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYM 208

Query: 366 RSLEQEDEDSFKRQFGKYIKIGVNPDDIETNYKKAHEAIRADPSHKK 506
           R+LE+EDE++FKRQF KYI +G+  DDIE  YK AH +IR  P  ++
Sbjct: 209 RTLEEEDEEAFKRQFSKYISLGIKADDIENIYKNAHASIRKIPPSRR 255


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 26.6 bits (56), Expect = 0.48
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
 Frame = -3

Query: 277 LLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK*HLN-------APGPLSTGSTLYSSP 119
           L +  G   PP+T    A  T AP      PT+   +        APG  +T +T+ S P
Sbjct: 15  LAVTSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTT-TTVASGP 73

Query: 118 VTSVAPV*RLSKPSLCNNLLASNRPV 41
           VT+       +  S   ++ A+  PV
Sbjct: 74  VTTTGSTDTTTPSSAPQDVKAALVPV 99


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 102  GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK--GAVDGGLNVP 263
            G T+ +GD+  ++  DNG G      +       TG+   G+    G++ GG   P
Sbjct: 2011 GGTDASGDDLEIDACDNGCGGGNGNENDDSGDGATGSGDNGSQHGGGSISGGGGTP 2066


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 450 ETNYKKAHEAIRADPSHK 503
           ET Y+   +AI+ DP+HK
Sbjct: 212 ETVYQMVKDAIKFDPAHK 229


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -3

Query: 277 LLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTS 179
           L +  G   PP+T    A  T AP      PT+
Sbjct: 15  LAVTSGQIDPPTTTVAPATTTVAPTTTTVAPTT 47


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 459 YKKAHEAIRADPSHK 503
           Y+K  + +R DP+HK
Sbjct: 241 YRKVRDTVRDDPAHK 255


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 325  CTSALNFLDSASYPGNLL 272
            CT+A   LD+ S+ GNLL
Sbjct: 1476 CTNANLSLDTTSHSGNLL 1493


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -3

Query: 247 PSTAPFMAPNTRAPVV-VRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 101
           P  A  +A     P+V V  +P+S    +  G +S  +  + +P  S+AP
Sbjct: 114 PRDASKIAARLIIPIVPVTVRPSSPKPNSRKGKISNANDKHVAPALSIAP 163


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 163 APGPLSTGSTLYSSPVTSVAPV-*RLSKPSLCN 68
           APGP    ST+     T+VAP+  +L   SL N
Sbjct: 558 APGPDGIPSTVLKRCQTTVAPILAKLFNASLAN 590


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -3

Query: 250 PPSTAPFMAPNTRAPVVVRAKPTSK*--HLNAPGPLSTGSTLYSSPVTS 110
           PP+T   +  +  A       PT+     L  P P +T +T+++ P T+
Sbjct: 214 PPTTTTTVWIDPTATTTTHVPPTTTTWSDLPPPPPTTTTTTVWTDPTTT 262


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -2

Query: 149 VNWFNIIFITSDFSGTCVETVQAEPLQQSSCQQQTSAVGSSIVS 18
           +N FN+        G C   V   P  Q +    ++AVGS+I S
Sbjct: 310 LNLFNMDVTKKCLIGECWVPVPDLPKVQKALSDGSAAVGSTIPS 353


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 349  CSPKMCALCTSALNFLDSASYPGNLLIECGTFKPP 245
            C+P + +  TS  NF     +P +     G  KPP
Sbjct: 1382 CAPNLLSSTTSTTNFSYQHPHPHHHHNGSGRSKPP 1416


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,564
Number of Sequences: 2352
Number of extensions: 11794
Number of successful extensions: 44
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)