Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_B04
(507 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 189 1e-48
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 33 0.090
AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical ... 31 0.36
AF016422-1|AAG24175.1| 335|Caenorhabditis elegans Seven tm rece... 29 1.9
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 28 4.5
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 28 4.5
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 5.9
AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in... 27 5.9
AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in ... 27 5.9
AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in ... 27 5.9
AF016451-3|AAB66001.1| 388|Caenorhabditis elegans Prion-like-(q... 27 5.9
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 27 7.8
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 27 7.8
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 189 bits (460), Expect = 1e-48
Identities = 89/165 (53%), Positives = 112/165 (67%), Gaps = 1/165 (0%)
Frame = +3
Query: 6 RVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEPV-DNGPGAFRCYLD 182
+VGLTNYAAAY TG DS Y G E+TG++YNVE D P F+ LD
Sbjct: 89 KVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVLD 146
Query: 183 VGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEY 362
+GLARTTTG+++F MKG DGG+NVPHS RF G+D ESK++NAE HR I G HVA+Y
Sbjct: 147 IGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADY 206
Query: 363 MRSLEQEDEDSFKRQFGKYIKIGVNPDDIETNYKKAHEAIRADPS 497
M L++EDED +KRQF K++ G+N D++ Y+K H AIRAD S
Sbjct: 207 MTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADAS 251
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 33.5 bits (73), Expect = 0.090
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +3
Query: 381 EDEDSFKR---QFGKYIKIGVNPDDIETNYKKAHEAIRADPS 497
ED+D+FK+ QFGK +K+G++ D TN KK + +R S
Sbjct: 400 EDKDNFKKFYEQFGKNLKLGIHED--STNRKKLSDFLRYSTS 439
>AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical
protein F41A4.1 protein.
Length = 696
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 132 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 308
N EP++ G F C+L TT+G+R G + L + ++FPG +
Sbjct: 68 NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127
Query: 309 F 311
F
Sbjct: 128 F 128
>AF016422-1|AAG24175.1| 335|Caenorhabditis elegans Seven tm
receptor protein 238 protein.
Length = 335
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = -2
Query: 476 LMRFLIICFNII-WIYTDFDIL---SKLSLERIFVFLLKATHVLCHM*SKDVCSMYFCIK 309
L ++L+I + +++ DIL S + IF+ + +A ++ +K+V SM FC+
Sbjct: 36 LYKYLMIYIAVYELLFSTLDILLAPDAYSYDTIFIMITRADKLILPPCTKEVASMMFCVL 95
Query: 308 F 306
F
Sbjct: 96 F 96
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 27.9 bits (59), Expect = 4.5
Identities = 26/119 (21%), Positives = 43/119 (36%)
Frame = +3
Query: 135 VEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFN 314
V P P D R +V A + + +NV + + + + +
Sbjct: 6 VFPNSRKPATLDANSDEQTLRPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLK 65
Query: 315 AEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGKYIKIGVNPDDIETNYKKAHEAIRAD 491
E+ H G HV E ++++++ GKYI DI T A+RAD
Sbjct: 66 EEISHLHEQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRAD 124
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 27.9 bits (59), Expect = 4.5
Identities = 26/119 (21%), Positives = 43/119 (36%)
Frame = +3
Query: 135 VEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFN 314
V P P D R +V A + + +NV + + + + +
Sbjct: 27 VFPNSRKPATLDANSDEQTLRPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLK 86
Query: 315 AEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGKYIKIGVNPDDIETNYKKAHEAIRAD 491
E+ H G HV E ++++++ GKYI DI T A+RAD
Sbjct: 87 EEISHLHEQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRAD 145
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.5 bits (58), Expect = 5.9
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = -3
Query: 247 PSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP--VTSVAPV*RLSKPS 77
PST + P + PT+ P +TG+T +SP +TS AP + PS
Sbjct: 485 PSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTASPSTITSSAPTSQSHSPS 543
>AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 8 protein.
Length = 445
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 98 VETVQAEPLQQSSCQQQTSAVGSSIVSQTHPR 3
V++ Q P Q SCQQQ A S VSQ P+
Sbjct: 76 VQSTQCAPACQQSCQQQCQA--SPSVSQCQPQ 105
>AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 7 protein.
Length = 438
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 98 VETVQAEPLQQSSCQQQTSAVGSSIVSQTHPR 3
V++ Q P Q SCQQQ A S VSQ P+
Sbjct: 76 VQSTQCAPACQQSCQQQCQA--SPSVSQCQPQ 105
>AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 6 protein.
Length = 388
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 98 VETVQAEPLQQSSCQQQTSAVGSSIVSQTHPR 3
V++ Q P Q SCQQQ A S VSQ P+
Sbjct: 76 VQSTQCAPACQQSCQQQCQA--SPSVSQCQPQ 105
>AF016451-3|AAB66001.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 5
protein.
Length = 388
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 98 VETVQAEPLQQSSCQQQTSAVGSSIVSQTHPR 3
V++ Q P Q SCQQQ A S VSQ P+
Sbjct: 76 VQSTQCAPACQQSCQQQCQA--SPSVSQCQPQ 105
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 253 KPPSTAPFMAPNTRAPVVVRAKPTSK 176
+PP AP TRAP RA P ++
Sbjct: 294 QPPPRGSTAAPGTRAPPATRAPPATR 319
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/57 (26%), Positives = 20/57 (35%)
Frame = -3
Query: 412 PNCLLKEXXXXXSRLRMYSATCSPKMCALCTSALNFLDSASYPGNLLIECGTFKPPS 242
PNC+L R + C +C C + FL+ G L KP S
Sbjct: 545 PNCMLCNTRFTIITRRHHCRACGRVLCGSCCNEKAFLEYLQEEGKKLQAVRVCKPCS 601
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,600,167
Number of Sequences: 27780
Number of extensions: 271010
Number of successful extensions: 919
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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