Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_B03
         (255 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    23   0.44 
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   1.8  
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               20   5.5  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    19   7.2  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    19   7.2  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      19   7.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    19   9.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    19   9.6  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 23.4 bits (48), Expect = 0.44
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 164 FYDLILSQSYFFTPTSKASFQYLKHFDTP 78
           F  +IL  SYF TPT        +H   P
Sbjct: 11  FLSVILITSYFVTPTMSIKCNCKRHVIKP 39


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +1

Query: 118 EVGVKK*LCDSIKS*NYVIMTPNIQSYIK 204
           E G  + + D + + N  +   N+QSY++
Sbjct: 36  ETGTSQKIIDEVYNGNVNVEDENVQSYVE 64


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 164 FYDLILSQSYFFTP 123
           F  +IL  SYF TP
Sbjct: 11  FLSVILITSYFVTP 24


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 226 FQTILETILCKIVCWES 176
           FQT L +IL  ++ W S
Sbjct: 246 FQTYLPSILIVMLSWVS 262


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 108 VPILKAL*YSTVKIIDNSMTYSLNDAI 28
           +P+++     TVK + NS    +ND +
Sbjct: 53  LPVIEIWDQMTVKELANSAKRDINDVL 79


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 178 TPNIQSYIKWFPESSGT 228
           TPN  S  K FP + G+
Sbjct: 291 TPNFLSEAKIFPPTPGS 307


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +2

Query: 221 LEPTVRQH 244
           +EPTV+QH
Sbjct: 251 IEPTVQQH 258


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 72  KIIDNSMTY 46
           K+IDN MTY
Sbjct: 325 KLIDNWMTY 333


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,521
Number of Sequences: 438
Number of extensions: 1213
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4511484
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)