Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_A08
         (503 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   0.78 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.4  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   5.5  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   5.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.5  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   7.3  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               21   7.3  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   7.3  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    21   7.3  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   9.6  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   9.6  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 344 MNFCDSIHFRHTSI 303
           M  CD +H RHT I
Sbjct: 214 MKMCDILHLRHTKI 227


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 442 NRTWLNLQQYYKY*HLNLYKRQ 377
           N+TWL + + YK  +L   KR+
Sbjct: 440 NKTWLPVNENYKSLNLAAQKRE 461


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 235 DYDQGVLLFKKDGTCYLQILLK 300
           D D+G L+ +   TCY+  LL+
Sbjct: 58  DVDKGNLVNEPSITCYMYCLLE 79


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 235 DYDQGVLLFKKDGTCYLQILLK 300
           D D+G L+ +   TCY+  LL+
Sbjct: 58  DVDKGNLVNEPSITCYMYCLLE 79


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 334 QKFIDVALDVTRNLLVFYTNLNVN 405
           ++F+D+    T NLL ++ ++  N
Sbjct: 819 KRFLDITTPPTPNLLRYFASIATN 842


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -1

Query: 104 FITLMVLFVYLLVRAFMFINVWRIDSKRP 18
           F+++  +FV++ +  +  +N+   DS  P
Sbjct: 310 FMSVCTVFVFMALMEYCLVNIVLGDSDTP 338


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 319 KCIESQKFIDVALDVTRNLLVFYTNLNVN 405
           KC+ +QKF    +D  +  +  Y   N N
Sbjct: 110 KCLTAQKFSRCVIDYVKFHITQYMISNAN 138


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 323 HFRHTSICFNSICK*H 276
           +F HT I + S+C  H
Sbjct: 39  YFHHTYIIYESLCGRH 54


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 323 HFRHTSICFNSICK*H 276
           +F HT I + S+C  H
Sbjct: 39  YFHHTYIIYESLCGRH 54


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 420 WRLSQVRLPCYVTTDCRV 473
           WR S++RLP  ++ D R+
Sbjct: 61  WRDSRLRLPENMSEDYRI 78


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +1

Query: 52  NINARTNKYTNNTMSVIKSILTSRPIP 132
           N N   N Y NN   +  +I+    IP
Sbjct: 339 NNNNYNNNYNNNCKKLYYNIINIEQIP 365


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,187
Number of Sequences: 438
Number of extensions: 2780
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)