Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_A04
         (289 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   4.0  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   4.0  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    20   5.3  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    20   5.3  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    20   5.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   5.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   7.0  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    19   9.2  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           19   9.2  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           19   9.2  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 141 MKRPLLHITLEIT 103
           MK P++ IT+EI+
Sbjct: 1   MKEPMIDITMEIS 13


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
 Frame = +2

Query: 71  EPSSVQRAATAVISNVICNSGRF-----IAPERATLFHFLVY 181
           EP+  +  +T+  S ++     +     I+PE+  L H LVY
Sbjct: 303 EPAEAESLSTSGSSGILTPVSPYGYVKPISPEQEELIHRLVY 344


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 209 YTSFWYIKFRKLENERASRVP 147
           Y   + + F K++NE  +RVP
Sbjct: 225 YEETFSLVFTKIDNEIFNRVP 245


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 234 GVCKLCFVIFECILL 278
           G C L  + FECI +
Sbjct: 452 GFCLLFLMFFECIAI 466


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 234 GVCKLCFVIFECILL 278
           G C L  + FECI +
Sbjct: 505 GFCLLFLMFFECIAI 519


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 54  DISRLESRRALSYIYTS 4
           DIS+L ++R  + IYTS
Sbjct: 517 DISKLVNKRNNAKIYTS 533


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 151 TRDALSFSSLRNFMYQNDV*FKLLS 225
           T+ AL   +L NF  + +V  +LLS
Sbjct: 26  TQQALELINLENFFPEENVVEELLS 50


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 101 AVISNVICNSGRFIAPER 154
           A+++ V+C +    AP+R
Sbjct: 1   ALVAVVLCTTATLAAPQR 18


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 62  MVSEPSSVQRAATAVISNVICNS 130
           MVS    V+    A++SN   NS
Sbjct: 22  MVSNSDRVRGNGNAIVSNSASNS 44


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 62  MVSEPSSVQRAATAVISNVICNS 130
           MVS    V+    A++SN   NS
Sbjct: 23  MVSNSDRVRGNGNAIVSNSASNS 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,403
Number of Sequences: 438
Number of extensions: 1240
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5744526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)