Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_A02
(636 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 229 5e-60
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 229 5e-60
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 229 5e-60
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 229 5e-60
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 229 5e-60
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 229 5e-60
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 229 5e-60
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 229 5e-60
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 229 5e-60
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 229 5e-60
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 229 5e-60
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 229 5e-60
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 229 5e-60
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 229 5e-60
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 229 5e-60
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 229 5e-60
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 228 1e-59
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 226 4e-59
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 221 2e-57
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 80 6e-15
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 36 0.16
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 36 0.16
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 36 0.16
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 36 0.16
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 36 0.16
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 36 0.16
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEII 471
C + P L + FFQAL I TKIS+GTIEI+
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 114 bits (275), Expect = 2e-25
Identities = 55/91 (60%), Positives = 69/91 (75%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + F QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 229 bits (561), Expect = 5e-60
Identities = 106/132 (80%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 105/132 (79%), Positives = 118/132 (89%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMG+NTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 118 bits (283), Expect = 2e-26
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
NISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLDITEE 209
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 226 bits (553), Expect = 4e-59
Identities = 106/132 (80%), Positives = 116/132 (87%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG +VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLPHI GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 126 QNTGLGPEKTSF 137
Score = 115 bits (276), Expect = 2e-25
Identities = 54/87 (62%), Positives = 68/87 (78%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 540
C + P L + FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNML
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
Query: 541 NISPFSYGLVVQQVYDSGTIFAPAILD 621
NISPFS+GLV+QQV+D+G+I+ P +LD
Sbjct: 179 NISPFSFGLVIQQVFDNGSIYNPEVLD 205
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 221 bits (540), Expect = 2e-57
Identities = 104/132 (78%), Positives = 117/132 (88%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
RATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HLE NPALEKLLP ++GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 124
Query: 381 HNTGLGPEKTSF 416
NTGLGPEKTSF
Sbjct: 125 QNTGLGPEKTSF 136
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 361 CLSSFPLITLALVLRRLXFFQALSIPTKISKGTIEII 471
C + P L + FFQAL I TKIS+GTIEI+
Sbjct: 118 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 80.2 bits (189), Expect = 6e-15
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 490 KPGDKVGASEATLLNMLNISPFSYGLVVQQVYDSGTIFAPAILDIKPE 633
K GDKVGASEATLLNMLNISPFS+GLV+QQV+D+G+I+ P +LDI E
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEE 49
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 35.5 bits (78), Expect = 0.16
Identities = 12/55 (21%), Positives = 30/55 (54%)
Frame = +1
Query: 427 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVQQVYDS 591
L +PT + +G + +++D + K GD + +A +L + + + ++ ++DS
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDS 210
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 35.5 bits (78), Expect = 0.16
Identities = 12/55 (21%), Positives = 30/55 (54%)
Frame = +1
Query: 427 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVQQVYDS 591
L +PT + +G + +++D + K GD + +A +L + + + ++ ++DS
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDS 210
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 35.5 bits (78), Expect = 0.16
Identities = 12/55 (21%), Positives = 30/55 (54%)
Frame = +1
Query: 427 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVQQVYDS 591
L +PT + +G + +++D + K GD + +A +L + + + ++ ++DS
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDS 210
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 35.5 bits (78), Expect = 0.16
Identities = 12/55 (21%), Positives = 30/55 (54%)
Frame = +1
Query: 427 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVQQVYDS 591
L +PT + +G + +++D + K GD + +A +L + + + ++ ++DS
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDS 210
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 35.5 bits (78), Expect = 0.16
Identities = 12/55 (21%), Positives = 30/55 (54%)
Frame = +1
Query: 427 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVQQVYDS 591
L +PT + +G + +++D + K GD + +A +L + + + ++ ++DS
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDS 210
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 35.5 bits (78), Expect = 0.16
Identities = 12/55 (21%), Positives = 30/55 (54%)
Frame = +1
Query: 427 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVQQVYDS 591
L +PT + +G + +++D + K GD + +A +L + + + ++ ++DS
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDS 210
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,720,268
Number of Sequences: 237096
Number of extensions: 2492612
Number of successful extensions: 5883
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5882
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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