Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_A02
(636 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 197 6e-51
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.8
Z77652-7|CAB01119.1| 341|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 29 2.8
AC090999-22|AAK26159.1| 481|Caenorhabditis elegans Hypothetical... 29 3.7
U40028-3|AAW57826.1| 378|Caenorhabditis elegans Fucosyl transfe... 28 4.9
AJ745073-1|CAG32979.1| 378|Caenorhabditis elegans alpha1,3-fuco... 28 4.9
Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical p... 28 6.4
Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical p... 28 6.4
Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical p... 28 6.4
Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical p... 28 6.4
Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical p... 28 6.4
Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical p... 28 6.4
Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical p... 28 6.4
Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical pr... 28 6.4
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 6.4
AL117206-1|CAB60446.1| 644|Caenorhabditis elegans Hypothetical ... 27 8.5
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 197 bits (480), Expect = 6e-51
Identities = 86/132 (65%), Positives = 110/132 (83%)
Frame = +3
Query: 21 RATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 200
R+TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RGH+ +LMGKNTM+RKA+
Sbjct: 6 RSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKAL 65
Query: 201 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 380
+ HL NP+LEKLLPHI NVGFVFT+ DL ++R KLLEN+ APA+ GAIAP V +P
Sbjct: 66 RGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPP 125
Query: 381 HNTGLGPEKTSF 416
NTG+GPEKTSF
Sbjct: 126 QNTGMGPEKTSF 137
Score = 119 bits (286), Expect = 2e-27
Identities = 51/77 (66%), Positives = 66/77 (85%)
Frame = +1
Query: 406 RLXFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVQQVY 585
+ FFQAL IPTKI++GTIEI+NDVH++K GDKVGASE+ LLNML ++PFSYGLVV+QVY
Sbjct: 134 KTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVY 193
Query: 586 DSGTIFAPAILDIKPED 636
D GT++ P +LD+ E+
Sbjct: 194 DDGTLYTPEVLDMTTEE 210
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 42.3 bits (95), Expect = 3e-04
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Frame = +3
Query: 33 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 212
K+N ++ +D+Y FI N+ S + IR + +S GKN ++ A+
Sbjct: 23 KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQK 82
Query: 213 ETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 377
A L K +KG G +FT +V + E + AR G +A +VV+P
Sbjct: 83 SDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLP 139
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +3
Query: 84 CFIVGAD--NVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKG 257
C G D + GS + + R + GH+ +L + + ++DH+++ ++K+ +
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHNIKKVYNCLCC 240
Query: 258 NVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 368
N F+ + L+ L+ + RPG + PL++
Sbjct: 241 NWTFL-NQVHLIS-HKTCLKQTGKPCCRPGHMEPLAI 275
>Z77652-7|CAB01119.1| 341|Caenorhabditis elegans Hypothetical
protein C06B3.10 protein.
Length = 341
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -2
Query: 320 VLQQFITHI-NKISTGEDKANISLDVRKQFFESWICFKMVLDGFPHHGVFAHEHNAVTTQ 144
++ F+ HI + IS NIS++ Q I LD P+ + NA+ TQ
Sbjct: 254 IIPVFLMHIPSTISMCAAFTNISIEFISQILSCTISLYPALDPLPNFFIIKSYRNAI-TQ 312
Query: 143 *NTDLLHLL 117
TD L LL
Sbjct: 313 YLTDFLRLL 321
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +3
Query: 84 CFIVGAD--NVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKG 257
C G D + GS + + R + GH+ +L + + ++DH+++ ++K+ +
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHNIKKVYNCLCC 240
Query: 258 NVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 368
N F+ + L+ L+ + RPG + PL++
Sbjct: 241 NWTFL-NQVHLIS-HKTCLKQTGKPCCRPGHMEPLAI 275
>AC090999-22|AAK26159.1| 481|Caenorhabditis elegans Hypothetical
protein Y82E9BR.17a protein.
Length = 481
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +1
Query: 307 NCWRTKSKPRLVLEPLLHCLSSFPLITLALVLRRLXFFQALSI 435
N W+T S+PR + E +L+ + F +IT+ +R++ + + +
Sbjct: 121 NFWKTYSEPR-IAEEVLNTIERFCVITMGRYVRKILCYMNVKL 162
>U40028-3|AAW57826.1| 378|Caenorhabditis elegans Fucosyl
transferase protein 5 protein.
Length = 378
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -2
Query: 431 ERAWKKXSLLRTKASVMSGNDDRQWSNGSRTSRGLDFV--LQQFITHINKISTGEDKANI 258
E+ WKK + +T VMS R +D L++F+ HI +++ E++
Sbjct: 258 EKFWKKAGIYKTVPIVMSRKIYRDLGIPDSMYIAVDDYPNLEEFVHHIQNVTSNEEEYMK 317
Query: 257 SLDVRKQF 234
RKQF
Sbjct: 318 YHKWRKQF 325
>AJ745073-1|CAG32979.1| 378|Caenorhabditis elegans
alpha1,3-fucosyltransferase homologueprotein.
Length = 378
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -2
Query: 431 ERAWKKXSLLRTKASVMSGNDDRQWSNGSRTSRGLDFV--LQQFITHINKISTGEDKANI 258
E+ WKK + +T VMS R +D L++F+ HI +++ E++
Sbjct: 258 EKFWKKAGIYKTVPIVMSRKIYRDLGIPDSMYIAVDDYPNLEEFVHHIQNVTSNEEEYMK 317
Query: 257 SLDVRKQF 234
RKQF
Sbjct: 318 YHKWRKQF 325
>Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 155 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 256
+H H Q HH HQ PS N SS ASS G
Sbjct: 369 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 404
>Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 155 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 256
+H H Q HH HQ PS N SS ASS G
Sbjct: 346 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 381
>Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 155 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 256
+H H Q HH HQ PS N SS ASS G
Sbjct: 531 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 566
>Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 155 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 256
+H H Q HH HQ PS N SS ASS G
Sbjct: 390 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 425
>Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical
protein C01F6.6e protein.
Length = 331
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 155 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 256
+H H Q HH HQ PS N SS ASS G
Sbjct: 254 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 289
>Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 155 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 256
+H H Q HH HQ PS N SS ASS G
Sbjct: 369 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 404
>Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 155 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 256
+H H Q HH HQ PS N SS ASS G
Sbjct: 346 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 381
>Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 155 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 256
+H H Q HH HQ PS N SS ASS G
Sbjct: 531 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 566
>Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 155 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 256
+H H Q HH HQ PS N SS ASS G
Sbjct: 390 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 425
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 370 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPT 260
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
>AL117206-1|CAB60446.1| 644|Caenorhabditis elegans Hypothetical
protein Y67A10A.1 protein.
Length = 644
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -2
Query: 323 FVLQQFITHINKISTGEDKANISLDVRKQFFESWICFKMVLDGFPH-HGVFAH--EHNAV 153
F++ +++ +I +DK ++ +E ++ +LD FP H F + H AV
Sbjct: 494 FIVARYMNNIKNPVQKDDKIVQQINETIAHYEKYVKKLYILDAFPEFHENFLNLFLHYAV 553
Query: 152 TTQ*NTDLLHL 120
T + D LHL
Sbjct: 554 TRPDDMDALHL 564
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,204,449
Number of Sequences: 27780
Number of extensions: 359149
Number of successful extensions: 1135
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -