Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_P19
(523 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82080-8|CAD92382.3| 404|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AL032625-7|CAN86642.1| 404|Caenorhabditis elegans Hypothetical ... 56 1e-08
AL023854-1|CAH60790.2| 404|Caenorhabditis elegans Hypothetical ... 56 1e-08
AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical... 48 5e-06
U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule los... 42 4e-04
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 41 6e-04
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 41 6e-04
Z54327-1|CAA91119.1| 569|Caenorhabditis elegans Hypothetical pr... 38 0.004
AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical... 33 0.16
Z83115-1|CAB05555.1| 178|Caenorhabditis elegans Hypothetical pr... 31 0.38
AF039042-5|AAC48246.1| 307|Caenorhabditis elegans Hypothetical ... 30 0.87
U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin ... 29 1.5
S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein. 29 1.5
M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protei... 29 1.5
AC006608-2|AAF39756.1| 1147|Caenorhabditis elegans Transformer :... 29 1.5
AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer :... 29 1.5
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 28 3.5
AL031634-2|CAA21035.1| 351|Caenorhabditis elegans Hypothetical ... 28 3.5
U97593-3|AAB52876.1| 250|Caenorhabditis elegans Hypothetical pr... 27 6.2
AC087078-3|AAG37944.1| 86|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z82080-8|CAD92382.3| 404|Caenorhabditis elegans Hypothetical
protein W09G3.7a protein.
Length = 404
Score = 56.4 bits (130), Expect = 1e-08
Identities = 32/96 (33%), Positives = 56/96 (58%)
Frame = +1
Query: 235 VTHIACGYGFTVASIKTEEQHKVFGTGINTDSQIGYHAPRVGHPLEMLLSPAPIYIPYKS 414
+ I+ G+GF++ + K ++++G GIN QIG + + +S I IP
Sbjct: 68 IKFISSGFGFSLFASK----NRLYGAGINNRFQIGGQLTNINKYQDYYISAKKINIP--- 120
Query: 415 LETKVVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
+++ +++GRAH++I T N GVF +G+N +GQCG
Sbjct: 121 -GDEILEISSGRAHSLIRT-NLGVFAIGDNNFGQCG 154
>AL032625-7|CAN86642.1| 404|Caenorhabditis elegans Hypothetical
protein W09G3.7a protein.
Length = 404
Score = 56.4 bits (130), Expect = 1e-08
Identities = 32/96 (33%), Positives = 56/96 (58%)
Frame = +1
Query: 235 VTHIACGYGFTVASIKTEEQHKVFGTGINTDSQIGYHAPRVGHPLEMLLSPAPIYIPYKS 414
+ I+ G+GF++ + K ++++G GIN QIG + + +S I IP
Sbjct: 68 IKFISSGFGFSLFASK----NRLYGAGINNRFQIGGQLTNINKYQDYYISAKKINIP--- 120
Query: 415 LETKVVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
+++ +++GRAH++I T N GVF +G+N +GQCG
Sbjct: 121 -GDEILEISSGRAHSLIRT-NLGVFAIGDNNFGQCG 154
>AL023854-1|CAH60790.2| 404|Caenorhabditis elegans Hypothetical
protein W09G3.7a protein.
Length = 404
Score = 56.4 bits (130), Expect = 1e-08
Identities = 32/96 (33%), Positives = 56/96 (58%)
Frame = +1
Query: 235 VTHIACGYGFTVASIKTEEQHKVFGTGINTDSQIGYHAPRVGHPLEMLLSPAPIYIPYKS 414
+ I+ G+GF++ + K ++++G GIN QIG + + +S I IP
Sbjct: 68 IKFISSGFGFSLFASK----NRLYGAGINNRFQIGGQLTNINKYQDYYISAKKINIP--- 120
Query: 415 LETKVVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
+++ +++GRAH++I T N GVF +G+N +GQCG
Sbjct: 121 -GDEILEISSGRAHSLIRT-NLGVFAIGDNNFGQCG 154
>AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical
protein Y48G8AL.1 protein.
Length = 1019
Score = 47.6 bits (108), Expect = 5e-06
Identities = 34/96 (35%), Positives = 49/96 (51%)
Frame = +1
Query: 235 VTHIACGYGFTVASIKTEEQHKVFGTGINTDSQIGYHAPRVGHPLEMLLSPAPIYIPYKS 414
VT + CG TV K K++ G N D Q+G G E S P+ + S
Sbjct: 43 VTSVTCGEQHTVFLTK---DGKMWSVGSNMDGQLGR-----GSRTEGSFSIYPV--SWTS 92
Query: 415 LETKVVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
K++ ++AGR+HTV +TD+ VF G+N +GQ G
Sbjct: 93 -SAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLG 127
Score = 34.3 bits (75), Expect = 0.054
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 427 VVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
VV A G HTV+LT F+ G++A GQCG
Sbjct: 244 VVEAACGDNHTVLLTHCGRTFSFGSDALGQCG 275
Score = 30.3 bits (65), Expect = 0.87
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 421 TKVVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
T V + G HTV LT + ++++G+N GQ G
Sbjct: 41 TAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLG 74
>U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule loss
protein 4 protein.
Length = 1392
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 424 KVVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
KV +A GRAHTV+LTD V G+ +YGQ G
Sbjct: 881 KVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMG 913
Score = 40.7 bits (91), Expect = 6e-04
Identities = 30/96 (31%), Positives = 48/96 (50%)
Frame = +1
Query: 235 VTHIACGYGFTVASIKTEEQHKVFGTGINTDSQIGYHAPRVGHPLEMLLSPAPIYIPYKS 414
+ +ACG + A I +E +G G+ D Q+G+ G+ E + P ++ P +
Sbjct: 1024 IVSVACGLSHS-ALITSEGTLYTWGKGL--DYQLGH-----GNKNERM-EPHQVFEPNGA 1074
Query: 415 LETKVVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
K V ++ G HT+ TD+ VF G N +GQCG
Sbjct: 1075 ---KWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 436 LAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
+A G H ++L+ + + G N +GQCG
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCG 809
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 364 PLEMLLSPAPIYIPYKSLETKVVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
P L P+ + + + KV ++ G HTV+L + VFT G+N +GQ G
Sbjct: 748 PQRSTLHPSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLG 800
Score = 35.9 bits (79), Expect = 0.018
Identities = 29/95 (30%), Positives = 45/95 (47%)
Frame = +1
Query: 232 QVTHIACGYGFTVASIKTEEQHKVFGTGINTDSQIGYHAPRVGHPLEMLLSPAPIYIPYK 411
+V+ ++CG TV +VF G N Q+G VG L +P + +P
Sbjct: 768 KVSSVSCGNFHTVL---LASDRRVFTFGSNCHGQLG-----VGDTLSKN-TPQQVILPS- 817
Query: 412 SLETKVVGLAAGRAHTVILTDNEGVFTLGNNAYGQ 516
+T +V +AAG HT++ ++ VFT G GQ
Sbjct: 818 --DTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQ 850
Score = 31.5 bits (68), Expect = 0.38
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 427 VVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
+ LA G++H V +T N +FT G N QCG
Sbjct: 615 ISSLALGKSHGVAVTRNGHLFTWGLNNMNQCG 646
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 364 PLEMLLSPAPIYIPYKSLETKVVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
P L P+ + + + KV ++ G HTV+L + VFT G+N +GQ G
Sbjct: 748 PQRSTLHPSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLG 800
Score = 35.9 bits (79), Expect = 0.018
Identities = 29/95 (30%), Positives = 45/95 (47%)
Frame = +1
Query: 232 QVTHIACGYGFTVASIKTEEQHKVFGTGINTDSQIGYHAPRVGHPLEMLLSPAPIYIPYK 411
+V+ ++CG TV +VF G N Q+G VG L +P + +P
Sbjct: 768 KVSSVSCGNFHTVL---LASDRRVFTFGSNCHGQLG-----VGDTLSKN-TPQQVILPS- 817
Query: 412 SLETKVVGLAAGRAHTVILTDNEGVFTLGNNAYGQ 516
+T +V +AAG HT++ ++ VFT G GQ
Sbjct: 818 --DTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQ 850
Score = 31.5 bits (68), Expect = 0.38
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 427 VVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
+ LA G++H V +T N +FT G N QCG
Sbjct: 615 ISSLALGKSHGVAVTRNGHLFTWGLNNMNQCG 646
>Z54327-1|CAA91119.1| 569|Caenorhabditis elegans Hypothetical
protein C26D10.1 protein.
Length = 569
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +1
Query: 361 HPLEMLLSPAPIYIPYKSLETKVVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
HPL + AP+ I +++ + K+V +AAG H V+L + + T G+ GQ G
Sbjct: 281 HPLLHKMQEAPVVIVHQA-KRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLG 333
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 418 ETKVVGLAAGRAHTVILTDNEGVFTLGN 501
E K+V LAAG + T LTD V GN
Sbjct: 243 EGKIVMLAAGASFTAALTDQGSVIAWGN 270
>AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical
protein Y39G10AR.3 protein.
Length = 998
Score = 32.7 bits (71), Expect = 0.16
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Frame = +1
Query: 223 IRFQVTHIACGYGFTVASIKTEEQHKVFGTGINTDSQIG------YHAP-RVGHPLEMLL 381
+R + I CG+ VA +++ E G G N Q+G + AP +V E
Sbjct: 568 LRENIKDIYCGHDHVVAVLESGE---CLGWGSNQYGQLGLPTLEHFFAPTKVFFLNEATA 624
Query: 382 SPAPIYIPYKSLETKVVGLAAGRAHTVILTDNEGVFTLGNNAYGQ 516
P IP S K+V AG+ T++L+D+ + +G+N + +
Sbjct: 625 LYGPFQIPMPS-NKKIVYGKAGKDATMLLSDDGSLIAMGSNKHNK 668
Score = 30.7 bits (66), Expect = 0.66
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 400 IPYKSLETKVVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
IP + +A + HT++LT++ +F G+N+ GQ G
Sbjct: 460 IPDLPSRISIKQVALSKTHTMVLTNDNELFGFGDNSCGQLG 500
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 238 THIACGYGFTVASIKTEEQHKVFGTGINTDSQI 336
TH+ CG GFT+ S TE++ +G TD +
Sbjct: 757 THVLCGDGFTLVS-TTEQELYFWGRKDLTDEDV 788
>Z83115-1|CAB05555.1| 178|Caenorhabditis elegans Hypothetical
protein K11D2.1 protein.
Length = 178
Score = 31.5 bits (68), Expect = 0.38
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 391 PIYIPYKSLETKVVGLAAGRAHTVILTDNEGVFTLGNNAYGQCG 522
P++I + + ++ +A G HTV LT+ +T G N YGQ G
Sbjct: 124 PVHIE-QLVGIRIKKVACGGWHTVALTEGGDAYTWGWNRYGQLG 166
>AF039042-5|AAC48246.1| 307|Caenorhabditis elegans Hypothetical
protein ZK697.3 protein.
Length = 307
Score = 30.3 bits (65), Expect = 0.87
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +3
Query: 39 EPEKFSR--CIGSETYFEPVNNTRFMYSMVVQSV----LSTIQSRFILSIMTIMTC*HLS 200
EPE S+ C+G + Y V T+F+ ++++ + S I S IL +T + +
Sbjct: 104 EPEAKSKQICVGGQNYKSKVTITQFLPLIILEKIKKQMFSCIFSSVILFYLTKVLIFVTA 163
Query: 201 FVIFIYRHTLSGYTYSLWVWFHSC 272
F+ F YR S + + H C
Sbjct: 164 FMSFFYRLRNSTGSKHFIITIHLC 187
>U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin
protein 5 protein.
Length = 419
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 336 NLGVCVYSSTKYFVLLLCFDGGNCETIPTSYMCNLKA 226
++G CVY ST+ + +G NCE+ P +++C L A
Sbjct: 118 DIGKCVYYSTQGSLAGKWLNG-NCESDPRAFVCELPA 153
>S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein.
Length = 1475
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 30 SSFEPEKFSRCIGSETYFEPVNNTRFMYSMVVQSVLSTIQSRFILSIMT 176
SSF E+ SRCI E F P+ N+ F + V ++ + Q ++ LS +T
Sbjct: 522 SSFCTERLSRCIQREKRF-PI-NSNFASLITVDTMTDSRQIQYFLSTVT 568
>M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protein
protein.
Length = 1475
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 30 SSFEPEKFSRCIGSETYFEPVNNTRFMYSMVVQSVLSTIQSRFILSIMT 176
SSF E+ SRCI E F P+ N+ F + V ++ + Q ++ LS +T
Sbjct: 522 SSFCTERLSRCIQREKRF-PI-NSNFASLITVDTMTDSRQIQYFLSTVT 568
>AC006608-2|AAF39756.1| 1147|Caenorhabditis elegans Transformer : xx
animals transformedinto males protein 2, isoform b
protein.
Length = 1147
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 30 SSFEPEKFSRCIGSETYFEPVNNTRFMYSMVVQSVLSTIQSRFILSIMT 176
SSF E+ SRCI E F P+ N+ F + V ++ + Q ++ LS +T
Sbjct: 522 SSFCTERLSRCIQREKRF-PI-NSNFASLITVDTMTDSRQIQYFLSTVT 568
>AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer : xx
animals transformedinto males protein 2, isoform a
protein.
Length = 1475
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 30 SSFEPEKFSRCIGSETYFEPVNNTRFMYSMVVQSVLSTIQSRFILSIMT 176
SSF E+ SRCI E F P+ N+ F + V ++ + Q ++ LS +T
Sbjct: 522 SSFCTERLSRCIQREKRF-PI-NSNFASLITVDTMTDSRQIQYFLSTVT 568
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 28.3 bits (60), Expect = 3.5
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 285 CFDGGNCETIPTSYMC 238
C++GG CE + T+Y C
Sbjct: 1716 CYNGGKCEQVGTTYKC 1731
>AL031634-2|CAA21035.1| 351|Caenorhabditis elegans Hypothetical
protein Y32B12C.2 protein.
Length = 351
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 352 RVGHPLEMLLSPAPIYIPYKSLETKVVGLAAGRAHTVIL 468
R + L+ ++ P +Y+ Y + VVG+ A H ++L
Sbjct: 21 RFWYDLQNIIRPIDVYLDYFNFSISVVGVIANIFHLIVL 59
>U97593-3|AAB52876.1| 250|Caenorhabditis elegans Hypothetical
protein C46G7.2 protein.
Length = 250
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 364 PLEMLLSPAPIYIPYKSLETK 426
PL+ +SPA ++PY S +TK
Sbjct: 136 PLDTYISPASSHVPYYSFQTK 156
>AC087078-3|AAG37944.1| 86|Caenorhabditis elegans Hypothetical
protein Y34F4.1 protein.
Length = 86
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 122 GTKCPVYNTIKIHSQYYDNNDLLTF 196
G P + T ++S+YYD DLL++
Sbjct: 23 GVFSPCFFTYYLYSRYYDQTDLLSY 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,300,420
Number of Sequences: 27780
Number of extensions: 293160
Number of successful extensions: 735
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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