Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_P18
(493 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58760-2|AAK31460.1| 130|Caenorhabditis elegans Ribosomal prote... 61 4e-10
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z78016-5|CAB01442.2| 479|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68010-3|CAA92011.1| 558|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z67756-4|CAA91765.1| 558|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z54327-13|CAE48494.1| 619|Caenorhabditis elegans Hypothetical p... 29 2.4
Z54307-9|CAE48498.1| 619|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF005246-1|AAB95119.1| 556|Caenorhabditis elegans voltage-depen... 29 2.4
U58760-3|AAL02443.1| 53|Caenorhabditis elegans Ribosomal prote... 27 5.6
Z78012-8|CAB01418.2| 945|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z75953-6|CAB00103.2| 945|Caenorhabditis elegans Hypothetical pr... 27 7.4
AY275181-1|AAP32289.1| 945|Caenorhabditis elegans soluble guany... 27 7.4
Z49125-1|CAA88934.1| 424|Caenorhabditis elegans Hypothetical pr... 27 9.8
U64847-8|AAQ91904.1| 558|Caenorhabditis elegans Acyltransferase... 27 9.8
U64847-7|AAB04876.1| 718|Caenorhabditis elegans Acyltransferase... 27 9.8
>U58760-2|AAK31460.1| 130|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 22, isoform a protein.
Length = 130
Score = 61.3 bits (142), Expect = 4e-10
Identities = 26/63 (41%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = +3
Query: 147 ISLKFTIDCTHPAEDSILDVGNFEKYLKERVKVEGKTNNL-GNHVVIARDKTKVAINADI 323
+ LKF ++C +P ED IL + + E +L E++KV GKT +L N+V + K+KV++ +++
Sbjct: 19 VHLKFNVECKNPVEDGILRIEDLEAFLNEKIKVNGKTGHLAANNVKVEVAKSKVSVVSEV 78
Query: 324 PFS 332
PFS
Sbjct: 79 PFS 81
Score = 30.7 bits (66), Expect = 0.60
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 388 DWLRVVASAHDSYELRYF 441
DWLRVVA ++YE+RYF
Sbjct: 100 DWLRVVAVNKNTYEVRYF 117
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 232 NVLKLKAKQITWAITLSSPGTRQKSLSTQTFPSQRGISNT*PSVTSRKTIFGDWLRVVAS 411
+V K + +AIT SSP R S ++ ++ +++ S TS KT G W + +
Sbjct: 504 SVAKKTSPPSIYAIT-SSPAKRASSTASGPTARRQNSTSSVTSTTSAKTPVGVWGACIET 562
Query: 412 AHD 420
HD
Sbjct: 563 VHD 565
>Z78016-5|CAB01442.2| 479|Caenorhabditis elegans Hypothetical
protein R186.5 protein.
Length = 479
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 191 ILSRVCAVNGKFKANLPLGTFAANFATFYS 102
++ +CA+ G LP+ +NFA FYS
Sbjct: 391 LIGSICALAGVLTIALPVPVIVSNFAMFYS 420
>Z68010-3|CAA92011.1| 558|Caenorhabditis elegans Hypothetical
protein R07A4.1 protein.
Length = 558
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 191 ILSRVCAVNGKFKANLPLGTFAANFATFYS 102
++ +CAV G LP+ +NFA FYS
Sbjct: 421 LVGSLCAVMGVLTIALPVPVIVSNFAMFYS 450
>Z67756-4|CAA91765.1| 558|Caenorhabditis elegans Hypothetical
protein R07A4.1 protein.
Length = 558
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 191 ILSRVCAVNGKFKANLPLGTFAANFATFYS 102
++ +CAV G LP+ +NFA FYS
Sbjct: 421 LVGSLCAVMGVLTIALPVPVIVSNFAMFYS 450
>Z54327-13|CAE48494.1| 619|Caenorhabditis elegans Hypothetical
protein F14F11.1h protein.
Length = 619
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 191 ILSRVCAVNGKFKANLPLGTFAANFATFYS 102
++ VCA+ G LP+ +NFA FYS
Sbjct: 489 LVGSVCALMGVLTIALPVPVIVSNFAMFYS 518
>Z54307-9|CAE48498.1| 619|Caenorhabditis elegans Hypothetical
protein F14F11.1h protein.
Length = 619
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 191 ILSRVCAVNGKFKANLPLGTFAANFATFYS 102
++ VCA+ G LP+ +NFA FYS
Sbjct: 489 LVGSVCALMGVLTIALPVPVIVSNFAMFYS 518
>AF005246-1|AAB95119.1| 556|Caenorhabditis elegans
voltage-dependent potassium channelalpha subunit
protein.
Length = 556
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 191 ILSRVCAVNGKFKANLPLGTFAANFATFYS 102
++ +CAV G LP+ +NFA FYS
Sbjct: 419 LVGSLCAVMGVLTIALPVPVIVSNFAMFYS 448
>U58760-3|AAL02443.1| 53|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 22, isoform b protein.
Length = 53
Score = 27.5 bits (58), Expect = 5.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 147 ISLKFTIDCTHPAEDSILDV 206
+ LKF ++C +P ED IL +
Sbjct: 19 VHLKFNVECKNPVEDGILRI 38
>Z78012-8|CAB01418.2| 945|Caenorhabditis elegans Hypothetical
protein F57F5.2 protein.
Length = 945
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 323 SLLKEVSQIPDQALPQEKQSSGTGSE 400
S LKEV++I ++AL QEK+ T E
Sbjct: 765 SELKEVNRIREEALAQEKEEERTTKE 790
>Z75953-6|CAB00103.2| 945|Caenorhabditis elegans Hypothetical
protein F57F5.2 protein.
Length = 945
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 323 SLLKEVSQIPDQALPQEKQSSGTGSE 400
S LKEV++I ++AL QEK+ T E
Sbjct: 765 SELKEVNRIREEALAQEKEEERTTKE 790
>AY275181-1|AAP32289.1| 945|Caenorhabditis elegans soluble guanylyl
cyclase GCY-33 protein.
Length = 945
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 323 SLLKEVSQIPDQALPQEKQSSGTGSE 400
S LKEV++I ++AL QEK+ T E
Sbjct: 765 SELKEVNRIREEALAQEKEEERTTKE 790
>Z49125-1|CAA88934.1| 424|Caenorhabditis elegans Hypothetical
protein C47G2.1 protein.
Length = 424
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 425 YESCAEATTRSQSPKIVFLEVTL 357
++SC A TRS +PK VF+ T+
Sbjct: 79 FDSCNTARTRSLNPKGVFVSTTV 101
>U64847-8|AAQ91904.1| 558|Caenorhabditis elegans
Acyltransferase-like protein 6,isoform b protein.
Length = 558
Score = 26.6 bits (56), Expect = 9.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 100 FLPVFWCNWHF 68
+L + WCNWHF
Sbjct: 13 YLLITWCNWHF 23
>U64847-7|AAB04876.1| 718|Caenorhabditis elegans
Acyltransferase-like protein 6,isoform a protein.
Length = 718
Score = 26.6 bits (56), Expect = 9.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 100 FLPVFWCNWHF 68
+L + WCNWHF
Sbjct: 173 YLLITWCNWHF 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,569,255
Number of Sequences: 27780
Number of extensions: 205591
Number of successful extensions: 547
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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