Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_P17
         (410 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   3.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   3.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   3.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    20   9.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    20   9.5  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    20   9.5  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    20   9.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    20   9.5  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 11/45 (24%), Positives = 19/45 (42%)
 Frame = +2

Query: 17  LLTNKKYYQRIYNSRVSLFASTXXXXXXXXXXXFGIKVNLNEKNT 151
           L T ++  +R   SR++   ST              + N NE++T
Sbjct: 221 LATRRRLRERARQSRINAVQSTRHREADDAEESVSSETNHNERST 265


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 11/45 (24%), Positives = 19/45 (42%)
 Frame = +2

Query: 17  LLTNKKYYQRIYNSRVSLFASTXXXXXXXXXXXFGIKVNLNEKNT 151
           L T ++  +R   SR++   ST              + N NE++T
Sbjct: 221 LATRRRLRERARQSRINAVQSTRHREADDAEESVSSETNHNERST 265


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 11/45 (24%), Positives = 19/45 (42%)
 Frame = +2

Query: 17  LLTNKKYYQRIYNSRVSLFASTXXXXXXXXXXXFGIKVNLNEKNT 151
           L T ++  +R   SR++   ST              + N NE++T
Sbjct: 221 LATRRRLRERARQSRINAVQSTRHREADDAEESVSSETNHNERST 265


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +3

Query: 81  PWNYYY 98
           PW+YYY
Sbjct: 171 PWDYYY 176


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +3

Query: 81  PWNYYY 98
           PW+YYY
Sbjct: 186 PWDYYY 191


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 250 FFNILSQIGLCALFCT 297
           FF +L  IGL + FCT
Sbjct: 380 FFFMLILIGLDSQFCT 395


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 250 FFNILSQIGLCALFCT 297
           FF +L  IGL + FCT
Sbjct: 433 FFFMLILIGLDSQFCT 448


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
          precursor protein.
          Length = 156

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +3

Query: 81 PWNYYY 98
          PW+YYY
Sbjct: 74 PWDYYY 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,089
Number of Sequences: 438
Number of extensions: 1872
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)