Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_P15
         (526 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   0.83 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   1.9  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   2.5  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   7.7  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 0.83
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 464 NIFTIILLSREETGDYVCIE*RPLGYPLNTPTLQ 363
           ++ +I  L+ E +GDY C+   P      T  LQ
Sbjct: 672 SLLSITNLAAEHSGDYTCVAANPAAEVRYTAKLQ 705


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 434  EETGDYVCIE*RPLGYPLNTP 372
            E  G  + ++ +PLG+PL+ P
Sbjct: 960  EVIGGAISLDGKPLGFPLDRP 980


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 399 SLFYTNVIPCFLP 437
           S+FYT VIP F P
Sbjct: 153 SVFYTAVIPMFSP 165


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 68  LTINYNYKINKYRIPIRSFSPR 3
           L+ NYNY  N Y+    +++ +
Sbjct: 318 LSNNYNYNNNNYKYNYNNYNKK 339


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,268
Number of Sequences: 438
Number of extensions: 2968
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)