Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_P14
(643 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 143 2e-35
SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|c... 47 2e-06
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 45 8e-06
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 38 0.001
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 37 0.003
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 36 0.004
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 36 0.005
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 34 0.015
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 34 0.020
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 33 0.035
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 32 0.061
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 32 0.081
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 31 0.14
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 31 0.19
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 31 0.19
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 29 0.57
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 29 0.57
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 29 0.57
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 29 0.57
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 29 0.75
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 29 0.75
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 29 0.75
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 29 0.75
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 28 1.3
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 28 1.3
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 28 1.3
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 27 1.7
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 27 1.7
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 27 2.3
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 27 3.0
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 26 4.0
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 26 4.0
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 26 5.3
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 26 5.3
SPAC4A8.08c |vas1||mitochondrial valine-tRNA ligase Vas1|Schizos... 26 5.3
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 26 5.3
SPBC17G9.06c |||N-acetyltransferase |Schizosaccharomyces pombe|c... 26 5.3
SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces ... 25 7.0
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 25 7.0
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 25 7.0
SPAC23C11.09 |||alanine-tRNA ligase |Schizosaccharomyces pombe|c... 25 7.0
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 25 9.3
SPAC23G3.01 |rpb2|SPAC521.06|DNA-directed RNA polymerase II comp... 25 9.3
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 143 bits (347), Expect = 2e-35
Identities = 71/158 (44%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
Frame = +3
Query: 180 IAWAPAEYGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLN 359
++WAP EYG LAC SSDG +S+L + +D G+ D + I AH G N++ W P S +
Sbjct: 105 VSWAPHEYGALLACASSDGKVSVLEF-KDDGSCDTR-IFTAHEPGCNAVCWSPP-SLSGS 161
Query: 360 LDPLSNKEAPKRIVTGGCDNLIKIWR-EQG-DQWVEENRLEMHMDWVRDVAWAPSLGLQR 533
+ S PK++ T GCDNL+KIW + G + W+ E+ L H+DW RDVAWAPS+GL +
Sbjct: 162 VVGQSPAAGPKKLATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSVGLTK 221
Query: 534 SMIASCSQDKRVAIWTSDDNVSW--TPTILNTFDDVVW 641
+ +AS SQDK V IWT + + W TP F D+ W
Sbjct: 222 TYLASASQDKNVFIWTKEGDGPWQKTPLTEEKFPDIAW 259
Score = 79.8 bits (188), Expect = 3e-16
Identities = 32/58 (55%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKES-GEWTKLHEYTGHESSVNSDS 184
L+GH GPVWQ+ WAHPK+ +LAS SYD VI+W+E+ G W++L ++T H++SVN+ S
Sbjct: 49 LRGHSGPVWQLGWAHPKFGTILASASYDGHVIVWRETGGVWSELMDHTAHQASVNAVS 106
Score = 37.5 bits (83), Expect = 0.002
Identities = 38/142 (26%), Positives = 55/142 (38%), Gaps = 2/142 (1%)
Frame = +3
Query: 180 IAWAPAEYGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCP-AISADL 356
+ WA ++G LA S DG + + + + G W AH VN++SW P A L
Sbjct: 59 LGWAHPKFGTILASASYDGHV--IVWRETGGVWSELMDHTAHQASVNAVSWAPHEYGALL 116
Query: 357 NLDPLSNKEAPKRIV-TGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQR 533
K + G CD I E G V + + V +P+ G ++
Sbjct: 117 ACASSDGKVSVLEFKDDGSCDTRIFTAHEPGCNAVCWSPPSLSGS---VVGQSPAAGPKK 173
Query: 534 SMIASCSQDKRVAIWTSDDNVS 599
A C D V IW D V+
Sbjct: 174 LATAGC--DNLVKIWAFDAGVN 193
Score = 37.1 bits (82), Expect = 0.002
Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 1/140 (0%)
Frame = +3
Query: 177 LIAWAPAEYGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADL 356
++ +PA LA D + I A+ NW ++ H ++W P++ L
Sbjct: 162 VVGQSPAAGPKKLATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSVG--L 219
Query: 357 NLDPLSNKEAPKRIVTGGCDNLIKIWREQGD-QWVEENRLEMHMDWVRDVAWAPSLGLQR 533
L++ K + IW ++GD W + + + D+AW S L
Sbjct: 220 TKTYLASASQDKNVF---------IWTKEGDGPW---QKTPLTEEKFPDIAWRVSWSLSG 267
Query: 534 SMIASCSQDKRVAIWTSDDN 593
+++A D +V ++ N
Sbjct: 268 NILAVSCGDNKVYLFKESQN 287
Score = 33.1 bits (72), Expect = 0.035
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +3
Query: 390 KRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWA-PSLGLQRSMIASCSQDKR 566
KR+ T D IK++ + +Q L H V + WA P G +++AS S D
Sbjct: 22 KRLATCSSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFG---TILASASYDGH 78
Query: 567 VAIWTSDDNVSWTPTILNT 623
V +W V W+ + +T
Sbjct: 79 VIVWRETGGV-WSELMDHT 96
Score = 28.3 bits (60), Expect = 1.00
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 11 DLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVII--WKESGEWTKLHEYTGHESSVNS 178
D H V V+WA +Y LLA S D KV + +K+ G +T HE N+
Sbjct: 94 DHTAHQASVNAVSWAPHEYGALLACASSDGKVSVLEFKDDGS-CDTRIFTAHEPGCNA 150
Score = 28.3 bits (60), Expect = 1.00
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +2
Query: 5 EADLKGHFGPVWQVAWAHPK--Y*NLLASCSYDRKVIIWKESGE--WTK 139
E L GH VAWA LAS S D+ V IW + G+ W K
Sbjct: 198 EDTLAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWTKEGDGPWQK 246
>SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 47.2 bits (107), Expect = 2e-06
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Frame = +3
Query: 180 IAWAPAEYGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLN 359
I++ P ++G LA S+D ++ I + GN + A+ + S + +N
Sbjct: 117 ISFCPFQHGCKLAAVSADATLRIYE-AMEPGNLTYWTLMNEIALMPSPPSRNEQPAFCVN 175
Query: 360 LDPLSNKEAPKRIVTGGCDNLIKIWREQGD-QWVEENRLEMHMDWVRDVAWAPSLGLQRS 536
P +E + + GC N I+++ +W + L H D +RD+ WAPS+G
Sbjct: 176 WCPSRWRE---QYIAVGCMNDAYIYKQNSHGKWKKVAELPGHTDLIRDICWAPSMGSSYY 232
Query: 537 MIASCSQDKRVAIW 578
+IA+ +D V I+
Sbjct: 233 LIATACKDGNVRIF 246
Score = 35.9 bits (79), Expect = 0.005
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 41 QVAWAHPKY*NLLASCSYDRKVIIWKE 121
+VAWAHP + +LA CS DR V I++E
Sbjct: 65 RVAWAHPSFGQVLAVCSLDRGVRIYEE 91
Score = 29.9 bits (64), Expect = 0.33
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +3
Query: 180 IAWAPAEYGLTLACCSSDGSISILAYVQ---DTGNW-DVKKIPGAHAIGVNSISWCP 338
+AWA +G LA CS D + I + ++ W +V K+ A + V IS+CP
Sbjct: 66 VAWAHPSFGQVLAVCSLDRGVRIYEEQKKNFESKTWVEVAKLMDARS-AVLDISFCP 121
Score = 26.6 bits (56), Expect = 3.0
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 480 HMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIWT-SDDNVSWTPT 611
H D V DV + G R M+ SCS D+RV ++ +DD +W T
Sbjct: 13 HQDLVNDVTY-DFYG--RRMV-SCSADQRVKVYDFNDDTETWAIT 53
Score = 25.8 bits (54), Expect = 5.3
Identities = 10/44 (22%), Positives = 19/44 (43%)
Frame = +3
Query: 201 YGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISW 332
YG + CS+D + + + DT W + A + ++W
Sbjct: 25 YGRRMVSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMRVAW 68
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 45.2 bits (102), Expect = 8e-06
Identities = 39/133 (29%), Positives = 57/133 (42%)
Frame = +3
Query: 180 IAWAPAEYGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLN 359
IAW+ G LA CS D S+ I +D +D + H V ++W P + DL
Sbjct: 384 IAWSCN--GNYLATCSRDKSVWIWEATEDD-EFDCLAVLQEHTQDVKVVTWHP--TEDL- 437
Query: 360 LDPLSNKEAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSM 539
+V+G DN I WR+ GD W +L+ H + V WA + +
Sbjct: 438 ------------LVSGSYDNSICFWRDDGDDWALTCQLQGHTNTV----WALAFSPNGNT 481
Query: 540 IASCSQDKRVAIW 578
+AS D V +W
Sbjct: 482 LASADNDGNVFLW 494
Score = 39.1 bits (87), Expect = 5e-04
Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 2/152 (1%)
Frame = +3
Query: 186 WAPAEYGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLNLD 365
W+ A + + +S S+ Y +T N V I G H + ++W P
Sbjct: 294 WSVAAHPMLPLFATSSQDKSVRIYNSNTYNL-VHVIDGFHTRSIRRVAWRPI-------- 344
Query: 366 PLSNKEAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIA 545
E P + D+++ I + D W LE H + V+ +AW+ + +A
Sbjct: 345 -----ERPV-LAVASFDSVVSINEKIDDDWECTAALEGHENEVKCIAWS----CNGNYLA 394
Query: 546 SCSQDKRVAIW--TSDDNVSWTPTILNTFDDV 635
+CS+DK V IW T DD + DV
Sbjct: 395 TCSRDKSVWIWEATEDDEFDCLAVLQEHTQDV 426
Score = 34.7 bits (76), Expect = 0.011
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 8 ADLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESG-EWTKLHEYTGHESSV 172
A L+ H V V W HP +LL S SYD + W++ G +W + GH ++V
Sbjct: 417 AVLQEHTQDVKVVTW-HPTE-DLLVSGSYDNSICFWRDDGDDWALTCQLQGHTNTV 470
Score = 29.9 bits (64), Expect = 0.33
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 8 ADLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWK 118
A L+GH V +AW+ N LA+CS D+ V IW+
Sbjct: 372 AALEGHENEVKCIAWSCNG--NYLATCSRDKSVWIWE 406
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 37.9 bits (84), Expect = 0.001
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +3
Query: 399 VTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIW 578
+TG D LIKIW G++ V+ + H D VR + P ASCS D + +W
Sbjct: 152 ITGSADKLIKIWN--GEKLVKS--ILAHNDCVRSLCQIPG------GFASCSNDGVIKLW 201
Query: 579 TSD 587
TSD
Sbjct: 202 TSD 204
Score = 30.7 bits (66), Expect = 0.19
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 74 LLASCSYDRKVIIWKE-SGEWTKLHEYTGHESSVN 175
L+ S S D +W++ +GEWT H Y HE VN
Sbjct: 27 LIGSASRDGTYSVWEQINGEWTP-HFYENHEGFVN 60
Score = 30.7 bits (66), Expect = 0.19
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 11 DLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWK 118
+L GH V+ + + H + L+ASC DR + IWK
Sbjct: 210 ELHGHTSFVYSLTYIHNQ--QLIASCGEDRTIRIWK 243
Score = 30.3 bits (65), Expect = 0.25
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 414 DNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIW 578
D +IK+W G+ E L H +V + + + + +IASC +D+ + IW
Sbjct: 195 DGVIKLWTSDGEFLYE---LHGHTSFVYSLTYIHN----QQLIASCGEDRTIRIW 242
Score = 28.7 bits (61), Expect = 0.75
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 80 ASCSYDRKVIIWKESGEWTKLHEYTGHESSVNS 178
ASCS D + +W GE+ L+E GH S V S
Sbjct: 190 ASCSNDGVIKLWTSDGEF--LYELHGHTSFVYS 220
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 36.7 bits (81), Expect = 0.003
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +3
Query: 399 VTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIW 578
VT N ++++ + G+ W H V V WAP + + I +CSQD+ ++
Sbjct: 27 VTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP----KSNRIVTCSQDRNAYVY 82
Query: 579 TSDDNVSWTPTIL 617
+ +W T++
Sbjct: 83 EKRPDGTWKQTLV 95
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 36.3 bits (80), Expect = 0.004
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 23 HFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSDS 184
H GP+ VA+ +P +LA+CS D+ + +W +LH GHE V S
Sbjct: 280 HSGPIHSVAF-NPHNDFILATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTKIS 332
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIW 115
L+GH V +++++ P +LAS S DR+ ++W
Sbjct: 321 LEGHEDIVTKISFS-PHEEPILASTSADRRTLVW 353
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 35.9 bits (79), Expect = 0.005
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +3
Query: 393 RIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVA 572
R+VTG D ++W D ++ H +WV VAWAP S+IA+ S D +
Sbjct: 149 RLVTGSGDFTARLW--DCDTQTPIATMKGHTNWVSCVAWAP----DASIIATGSMDNTIR 202
Query: 573 IW 578
W
Sbjct: 203 FW 204
Score = 32.7 bits (71), Expect = 0.046
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 8 ADLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSV 172
A L+GH V+Q AW+ LL S S D + +W + K + GHE V
Sbjct: 425 ATLRGHVAAVYQCAWSTDS--RLLVSSSQDTTLKVWDVRSKKMKF-DLPGHEDQV 476
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 34.3 bits (75), Expect = 0.015
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 480 HMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIWTSDDNVS-WTPT 611
H DWV V W P+ + MI S S D + +W D N W T
Sbjct: 267 HEDWVMSVDWHPT----KEMILSSSADSSMIVWEPDTNTGIWVVT 307
Score = 33.5 bits (73), Expect = 0.026
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
Frame = +3
Query: 222 CSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLNLDPLSNKEAPKRIV 401
C S + + +T +W+ +++ H++ V +I + P + I+
Sbjct: 550 CKSQTPEHAVIRLYETQSWNQQQVLKGHSLTVTTIKFSPD---------------DRYIL 594
Query: 402 TGGCDNLIKIWREQGDQWVEENR---LEMHMDWVRDVAWAPS-LGLQRSMIASCSQDKRV 569
+ G D L+ + EQ + ++ N ++ H + D +WAP +G A+ S+DK V
Sbjct: 595 SAGRDRLVCL-HEQAENLLDYNNFASIKAHSRIIWDASWAPKEMGY---FFATASRDKFV 650
Query: 570 AIWTSDDNVSWTPTILNTFDDVV 638
W +DN F D V
Sbjct: 651 KFWKINDNKKICDVAALQFSDAV 673
Score = 31.1 bits (67), Expect = 0.14
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 471 LEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIW 578
L H+DWVR +++ + G + +AS SQD+ + +W
Sbjct: 187 LRGHLDWVRTLSFKKTSG-STATLASGSQDRYIRLW 221
Score = 29.1 bits (62), Expect = 0.57
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 426 KIWREQGDQWVEENRLEMHMDWVRDVAWAP 515
++W++ QW++ + H V+ VAW P
Sbjct: 351 RLWKQDAGQWLQLPSISGHTKSVKGVAWDP 380
Score = 29.1 bits (62), Expect = 0.57
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 8 ADLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWK 118
A +K H +W +WA + A+ S D+ V WK
Sbjct: 618 ASIKAHSRIIWDASWAPKEMGYFFATASRDKFVKFWK 654
Score = 25.4 bits (53), Expect = 7.0
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +3
Query: 378 KEAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQ 557
KE T D +K W+ ++ + + D V V +AP ++A ++
Sbjct: 635 KEMGYFFATASRDKFVKFWKINDNKKICDVAALQFSDAVTAVDFAPFFHNDELLLAVGTE 694
Query: 558 DKRVAIW--TSDDNVSWTPTIL 617
++ IW ++ W PT L
Sbjct: 695 AGKIFIWRCPRENLTKWYPTRL 716
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +2
Query: 110 IWKE-SGEWTKLHEYTGHESSV 172
+WK+ +G+W +L +GH SV
Sbjct: 352 LWKQDAGQWLQLPSISGHTKSV 373
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 33.9 bits (74), Expect = 0.020
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 396 IVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAI 575
+ T D + +W + + + + LE H D V + W+P ++AS S D+RV I
Sbjct: 297 LATASADKTVALW-DLRNPYQRLHTLEGHEDEVYGLEWSPH---DEPILASSSTDRRVCI 352
Query: 576 W 578
W
Sbjct: 353 W 353
Score = 31.1 bits (67), Expect = 0.14
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 74 LLASCSYDRKVIIWKESGEWTKLHEYTGHESSV 172
LLA+ S D+ V +W + +LH GHE V
Sbjct: 296 LLATASADKTVALWDLRNPYQRLHTLEGHEDEV 328
Score = 29.1 bits (62), Expect = 0.57
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIW 115
L+GH V+ + W+ P +LAS S DR+V IW
Sbjct: 321 LEGHEDEVYGLEWS-PHDEPILASSSTDRRVCIW 353
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 33.1 bits (72), Expect = 0.035
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 17 KGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVN 175
KGH GPVW VA+ + + A+ S+D+ +W L + GH S V+
Sbjct: 418 KGHTGPVWDVAFG--PFGHYFATASHDQTAQLW-SCDHIYPLRVFAGHLSDVD 467
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 32.3 bits (70), Expect = 0.061
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +3
Query: 396 IVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAI 575
I++ G D L+K+WR + E + H + V + P + +I S S+DK + +
Sbjct: 227 ILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHP----HQELILSASEDKTIRV 282
Query: 576 W 578
W
Sbjct: 283 W 283
Score = 27.5 bits (58), Expect = 1.7
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 399 VTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIW 578
V+GG D + +W + + + L HMD+VR + + I SCS D+ + IW
Sbjct: 69 VSGGDDYKVNVWNYKSRKLLFS--LCGHMDYVRVCTFHH----EYPWILSCSDDQTIRIW 122
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 31.9 bits (69), Expect = 0.081
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +3
Query: 390 KRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRV 569
K + T D + IW + ++ E RL+ H WV D A++ + + + S D
Sbjct: 228 KHLATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFS----ADSTYLVTASSDHVA 283
Query: 570 AIW 578
+W
Sbjct: 284 RLW 286
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 31.1 bits (67), Expect = 0.14
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 17 KGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEY 151
+GH V W +P + +LAS D K++IWK ++T + Y
Sbjct: 78 RGHTAAVLDTDW-NPFHDQVLASGGDDSKIMIWKVPEDYTVMEPY 121
Score = 29.9 bits (64), Expect = 0.33
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 8 ADLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIW 115
A+LKGH V V + HP N+LAS S D + +W
Sbjct: 128 AELKGHSRKVGLVQY-HPTAANVLASSSADNTIKLW 162
Score = 25.8 bits (54), Expect = 5.3
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Frame = +3
Query: 396 IVTGGCDNLIKIWREQGDQWVEENRLEMH-----MDWVRDVAWAPSLGLQRSMIASCSQD 560
+ +GG D+ I IW+ D V E ++H R V +++AS S D
Sbjct: 97 LASGGDDSKIMIWKVPEDYTVMEPYEDVHPIAELKGHSRKVGLVQYHPTAANVLASSSAD 156
Query: 561 KRVAIWTSDDNVS 599
+ +W + V+
Sbjct: 157 NTIKLWDCEKGVA 169
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 30.7 bits (66), Expect = 0.19
Identities = 35/123 (28%), Positives = 56/123 (45%)
Frame = +3
Query: 210 TLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLNLDPLSNKEAP 389
T A DG++ + ++ N+ ++ AH GVN +++ PA + P
Sbjct: 156 TFASSCLDGTVKVWSFGSSVANFTLQ----AHDRGVNYVNYYPA------------GDKP 199
Query: 390 KRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRV 569
++T G DNLIK+W Q V LE H +V++A + +I S S+D V
Sbjct: 200 Y-LITAGDDNLIKVWDYQTKACV--RILEGH---TNNVSFA-FFHSKFPIIISGSEDGTV 252
Query: 570 AIW 578
IW
Sbjct: 253 KIW 255
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 30.7 bits (66), Expect = 0.19
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 5 EADLKGHFGPVWQVAWA-HPKY*NLLASCSYDRKVIIW--KESGEWTKLHEYTGHESSVN 175
E L GH+ + QV WA KY LAS S D+ + IW ++ L +T + SS++
Sbjct: 89 ECTLFGHYRGISQVKWATGSKY---LASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSID 145
Query: 176 SDSLGS 193
+ LG+
Sbjct: 146 FNPLGT 151
Score = 28.3 bits (60), Expect = 1.00
Identities = 23/90 (25%), Positives = 34/90 (37%)
Frame = +3
Query: 330 WCPAISADLNLDPLSNKEAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAW 509
+C + ++ +S + I T D IKIW + E L H + V W
Sbjct: 47 YCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRL--ECTLFGHYRGISQVKW 104
Query: 510 APSLGLQRSMIASCSQDKRVAIWTSDDNVS 599
A +AS S DK + IW + S
Sbjct: 105 ATG----SKYLASASDDKTIRIWDFEKRCS 130
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 29.1 bits (62), Expect = 0.57
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +3
Query: 372 SNKEAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASC 551
S+ A + T D +I+ + + ++++H ++VRDV W+ G S IAS
Sbjct: 241 SSNSAHDLLATASYDMTSRIFDPEQHSCIR--KVDLHSEFVRDVDWS-DFG-DGSWIASV 296
Query: 552 SQDKRVAIWTS 584
D+ + IW +
Sbjct: 297 GWDESLYIWNA 307
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 29.1 bits (62), Expect = 0.57
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +3
Query: 402 TGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIWT 581
TG D IKIW V + L H+ VR +A +P + + SC +DK V W
Sbjct: 180 TGAGDRTIKIWDLASG--VLKLTLTGHIATVRGLAVSP----RHPYLFSCGEDKMVKCWD 233
Query: 582 SDDN 593
+ N
Sbjct: 234 LETN 237
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 29.1 bits (62), Expect = 0.57
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 387 PKRIVTGGCDNLIKIW 434
P VTGGCD L K+W
Sbjct: 160 PNLFVTGGCDKLAKLW 175
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 29.1 bits (62), Expect = 0.57
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 393 RIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIAS--CSQDKR 566
++ +GG DN+++IW + + + H V+ VAW P Q +++A+ + DK+
Sbjct: 318 QLASGGNDNVVQIWDARSS--IPKFTKTNHNAAVKAVAWCP---WQSNLLATGGGTMDKQ 372
Query: 567 VAIWTS 584
+ W +
Sbjct: 373 IHFWNA 378
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 28.7 bits (61), Expect = 0.75
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +3
Query: 393 RIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVA 572
++V+ D L+K+W + V L+ H D V WA + S++ S D V+
Sbjct: 563 QVVSAAADGLVKVWSLSSGECVA--TLDNHEDRV----WALASRFDGSLLVSGGADAVVS 616
Query: 573 IW 578
+W
Sbjct: 617 VW 618
Score = 25.4 bits (53), Expect = 7.0
Identities = 6/28 (21%), Positives = 19/28 (67%)
Frame = +3
Query: 396 IVTGGCDNLIKIWREQGDQWVEENRLEM 479
+V+GG D ++ +W++ ++++ + E+
Sbjct: 606 LVSGGADAVVSVWKDVTEEYIAKQAEEL 633
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 28.7 bits (61), Expect = 0.75
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = +3
Query: 168 Q*ILIAWAPAEYGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAIS 347
Q + +AW+P Y LA S+D ++ I WD++K+ AH I +S ++
Sbjct: 351 QIVAMAWSPNGY--QLATSSADDTVKI---------WDLRKVSLAHTIPAHS-----SLV 394
Query: 348 ADLNLDPLSNKEAPKRIVTGGCDNLIKIW 434
+D+ + I T G D +K+W
Sbjct: 395 SDVR---YIESGVNRFIATSGYDGCVKLW 420
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 28.7 bits (61), Expect = 0.75
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKE-SGEWTKLHEYTGHESSVN 175
L GH V + W+ L SCS D+ VI+W +GE KL +Y H SV+
Sbjct: 251 LIGHIDTVAYIRWSPDD--RYLLSCSCDKSVILWDAFTGE--KLRDYK-HGFSVS 300
Score = 27.5 bits (58), Expect = 1.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 468 RLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIW 578
RL H+D V + W+P R ++ SCS DK V +W
Sbjct: 250 RLIGHIDTVAYIRWSPD---DRYLL-SCSCDKSVILW 282
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 28.7 bits (61), Expect = 0.75
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1
Query: 343 IAGHQLMELTPMACAPGIFFTSQLPVSWTYASIEIDPSELQHAKVKPYSAGA 188
+AG +L+E P + G F+ +L + WTY IE ++ V SAG+
Sbjct: 150 LAGKELLEEDPKSSNFG-FWDQRLGLEWTYKHIESFGGNKENIAVGGISAGS 200
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 27.9 bits (59), Expect = 1.3
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 5 EADLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWK-ESGEWTKLHEYTGHESSV 172
EA L+GH VW V H N L S S D+ V +W E + T H + GH S +
Sbjct: 384 EARLEGHKEGVWAVK-IHE---NTLVSGSIDKTVRVWNIEKAKCT--HIFRGHISII 434
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 27.9 bits (59), Expect = 1.3
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 12/80 (15%)
Frame = +3
Query: 393 RIVTGGCDNLIKIWREQGDQWVEENR------------LEMHMDWVRDVAWAPSLGLQRS 536
RI TGG D I+IW + EN + H V V ++P+
Sbjct: 32 RIATGGLDGTIRIWSTEAINRENENENENEDLPKQLCCMSTHTGTVTSVRFSPN----GQ 87
Query: 537 MIASCSQDKRVAIWTSDDNV 596
+AS S D+ V IW ++ +
Sbjct: 88 YLASGSDDRVVIIWHKEEAI 107
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 27.9 bits (59), Expect = 1.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 471 LEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIWTSDDNVSWTP 608
L H V V W P +S +A+C D V++W D V+ +P
Sbjct: 311 LRGHKGDVNAVKWMPG---SKSKLATCGDDCVVSLWDLDQPVNPSP 353
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 27.5 bits (58), Expect = 1.7
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNS 178
L+GH V +VA +L+ S SYD + +WK S LH GH V S
Sbjct: 573 LRGHTDSVREVACLG----DLIVSASYDGTLRVWKAS-TGVCLHVLRGHVGRVYS 622
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 27.5 bits (58), Expect = 1.7
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 23 HFGPVWQVAWAHPKY*NLLASCSYDRKVIIWK-ESGEWTKLHEY 151
H+G V +AW LASC D ++ +W ESG T L E+
Sbjct: 245 HYGTVNGLAWTSDA--RYLASCGTDDRIRVWNMESGRNT-LREF 285
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 27.1 bits (57), Expect = 2.3
Identities = 17/72 (23%), Positives = 28/72 (38%)
Frame = +3
Query: 390 KRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRV 569
++IV+GG D ++IW E +H V L I +C+ +
Sbjct: 440 EKIVSGGYDGTVRIWNFN----TGEQHCVLHNSRNSRVF---GLQFDHRRIIACTHSSEI 492
Query: 570 AIWTSDDNVSWT 605
+W DD + T
Sbjct: 493 LVWNFDDGLDCT 504
Score = 26.2 bits (55), Expect = 4.0
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSV 172
L GH G V + + + NLL S S D +IIW L Y GH +V
Sbjct: 257 LYGHSGSVLCLDFCRRR--NLLVSGSSDSTIIIWDWQNR-RPLKVYFGHTDNV 306
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 26.6 bits (56), Expect = 3.0
Identities = 23/82 (28%), Positives = 38/82 (46%)
Frame = +3
Query: 396 IVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAI 575
IVTGG D+ I I + +E H RD ++ + + SCS D+ + +
Sbjct: 223 IVTGGLDHRIVI---RDSVTLEPQHCWKHH---RDAVMGLAMRRGTNEMFSCSADRSIKV 276
Query: 576 WTSDDNVSWTPTILNTFDDVVW 641
W S D +S+ T+ DV++
Sbjct: 277 W-SLDQMSYIETLFG-HQDVIF 296
Score = 26.2 bits (55), Expect = 4.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 32 PVWQVAWAHPKY*NLLASCSYDRKVIIWK 118
P W + A Y NL AS S+D + +WK
Sbjct: 411 PRWITSLAAIPYSNLFASGSWDGNIRLWK 439
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 26.2 bits (55), Expect = 4.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 540 IASCSQDKRVAIWTSDDN 593
+ASC +DK + IW S N
Sbjct: 236 LASCGRDKTIRIWDSTSN 253
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 26.2 bits (55), Expect = 4.0
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIW 115
L GH GPV +++ +LLAS S+D+ V IW
Sbjct: 463 LAGHEGPVSSLSFNSSG--SLLASGSWDKTVRIW 494
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 25.8 bits (54), Expect = 5.3
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 20 GHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSDS 184
GH PV + + + N + +CS D V IW E +++ E S V+S S
Sbjct: 289 GHLEPVTDITYINNPPSNNIVTCSTDGLVHIW-EPDMFSRPSETICLSSQVDSSS 342
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 25.8 bits (54), Expect = 5.3
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 441 QGDQWVEENRLEMHMDWVRDVAWAPSL---GLQRSMIASCSQDKRVAIWTS 584
Q D W + L H + + P L Q+S+IAS + D V+IW +
Sbjct: 264 QRDTWTYDINLVGHQGPLECATFNPYLYEDPFQKSIIASAAHDGCVSIWNT 314
>SPAC4A8.08c |vas1||mitochondrial valine-tRNA ligase
Vas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 950
Score = 25.8 bits (54), Expect = 5.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 436 LHIFIKLSHPPVTILFGASL 377
LHIF+KL HP V + G L
Sbjct: 746 LHIFLKLIHPIVPCISGVML 765
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 25.8 bits (54), Expect = 5.3
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -1
Query: 571 ATLLS*EQLAIIERCRPRDGAHATSRTQSICISNLFSSTH*SPCSLHIFI-KLSHPPVTI 395
A L+ Q+++ + C P + R + SN+F +T S L I I +L T+
Sbjct: 439 AKSLNLSQVSLHQACEPEYNRSSLVRASDVFTSNVFDATEESANELAIRISELQAEVGTL 498
Query: 394 LFGASLLLS 368
L A+ L S
Sbjct: 499 LLEATSLAS 507
>SPBC17G9.06c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 334
Score = 25.8 bits (54), Expect = 5.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 113 WKESGEWTKLHEY 151
W ESG W + HEY
Sbjct: 186 WNESGSWDQHHEY 198
>SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 805
Score = 25.4 bits (53), Expect = 7.0
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3
Query: 542 NHRTL*AKGWCP 507
NH+ L A+GWCP
Sbjct: 319 NHKCLIAEGWCP 330
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPK 64
+KGHFGP+ +A HPK
Sbjct: 284 VKGHFGPINTIA-VHPK 299
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.4 bits (53), Expect = 7.0
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 11/96 (11%)
Frame = +3
Query: 372 SNKEAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAW---APSLGLQRS-- 536
SN+ A +V+G D +K+W V+ H D V + W APS+ L S
Sbjct: 262 SNRNAHNLLVSGSADTTLKLWDLSTCNCVKS--FTYHSDKVSCLDWYSKAPSVLLSGSYD 319
Query: 537 ---MIASCSQDKRVAIW--TSD-DNVSWTPTILNTF 626
IA ++ + + TSD +NV+W N F
Sbjct: 320 KTAKIADLRLEEAPSSFQVTSDVENVAWDQHSENNF 355
>SPAC23C11.09 |||alanine-tRNA ligase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 959
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 149 YTGHESSVNSDSLGSR*IWLDLGM 220
+ GHE S L +R +WLD+G+
Sbjct: 143 FGGHEESGLEPDLEARQLWLDIGI 166
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 516 SLGLQRSMIASCSQDKRVAIWTSD 587
S+ Q+ I SCS+D +W+ D
Sbjct: 410 SISPQKEFILSCSEDGFTRLWSKD 433
>SPAC23G3.01 |rpb2|SPAC521.06|DNA-directed RNA polymerase II complex
subunit Rpb2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1210
Score = 25.0 bits (52), Expect = 9.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 198 EYGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSI 326
E+ LTLA S+ + L Y TGNW +K + +GV+ +
Sbjct: 427 EFNLTLAV-KSNIITNGLRYSLATGNWGDQKRSMVNRVGVSQV 468
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,977,195
Number of Sequences: 5004
Number of extensions: 65144
Number of successful extensions: 307
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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