Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_P14
(643 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 95 5e-20
AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore... 83 2e-16
AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical ... 55 4e-08
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 45 5e-05
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 41 7e-04
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 37 0.011
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 37 0.011
AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical ... 37 0.014
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 35 0.057
AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical ... 34 0.075
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 34 0.099
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 34 0.099
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 33 0.23
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 32 0.30
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 32 0.40
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 31 0.53
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 31 0.53
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 31 0.53
AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical ... 31 0.53
U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical pr... 31 0.70
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 31 0.70
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 31 0.93
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 31 0.93
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 31 0.93
AF101309-3|AAN60514.1| 760|Caenorhabditis elegans Hypothetical ... 31 0.93
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 31 0.93
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 31 0.93
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 29 2.1
AF216968-1|AAF60253.2| 658|Caenorhabditis elegans semaphorin-2a... 29 2.8
AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation... 29 2.8
AC025726-1|AAK73921.1| 658|Caenorhabditis elegans Male abnormal... 29 2.8
U22831-9|AAN63388.1| 412|Caenorhabditis elegans Hypothetical pr... 29 3.7
U22831-8|AAK20070.2| 545|Caenorhabditis elegans Hypothetical pr... 29 3.7
AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical... 29 3.7
AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical... 29 3.7
U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chlor... 28 4.9
U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chlor... 28 4.9
AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type chlo... 28 4.9
AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride ... 28 4.9
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 28 6.5
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 28 6.5
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 28 6.5
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 28 6.5
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 27 8.6
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 27 8.6
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 94.7 bits (225), Expect = 5e-20
Identities = 55/152 (36%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Frame = +3
Query: 180 IAWAPAEYGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLN 359
+A+AP +YGL LA S+DG I IL Y + W KI H GVNS+ W P SAD
Sbjct: 110 VAFAPHQYGLMLASASADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPG-SAD-- 166
Query: 360 LDPLSNKEAPKRIVTGGCDNLIKIWR--EQGDQWVEENRLEMHMDWVRDVAWAPSLGLQR 533
A KR+V+ G D +KIW + ++W+ E L H D+VR+ AW P +
Sbjct: 167 ------PAAKKRLVSAGNDKNVKIWAFDDATNEWILEKTLAGHTDFVREAAWCPVTNNGQ 220
Query: 534 SMIASCSQDKRVAIW-TSD-DNVSWTPTILNT 623
I SC + + ++ TS+ + W +L T
Sbjct: 221 HTIVSCGMEGNLVLFRTSNIETEEWKAKLLET 252
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/55 (63%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +2
Query: 8 ADLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKE-SGEWTKLHEYTGHESS 169
A+L GH GPVW+V+WAHPKY LLAS SYD+KVIIW E G W K +E+ HE+S
Sbjct: 52 AELVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIWNEQQGRWQKAYEWAAHEAS 106
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 393 RIVTGGCDNLIKIWREQGD-QWVEENRLEMHMDWVRDVAWA-PSLGLQRSMIASCSQDKR 566
R+ T G D L+KI+ + + Q L H V V+WA P G ++AS S DK+
Sbjct: 27 RLATCGSDRLVKIFEVRPNGQSYPMAELVGHSGPVWKVSWAHPKYG---GLLASASYDKK 83
Query: 567 VAIW 578
V IW
Sbjct: 84 VIIW 87
Score = 32.7 bits (71), Expect = 0.23
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Frame = +3
Query: 201 YGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLNLDPLSNK 380
YG LA C SD + I + ++ + ++ G H+ V +SW L L++
Sbjct: 24 YGSRLATCGSDRLVKIFEVRPNGQSYPMAELVG-HSGPVWKVSWAHPKYGGL----LASA 78
Query: 381 EAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAP-SLGLQRSMIASCSQ 557
K+++ IW EQ +W + H VA+AP GL M+AS S
Sbjct: 79 SYDKKVI---------IWNEQQGRWQKAYEWAAHEASTTCVAFAPHQYGL---MLASASA 126
Query: 558 DKRVAIWTSDDN 593
D + I D++
Sbjct: 127 DGDIGILRYDNS 138
>AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform b protein.
Length = 211
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/55 (63%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +2
Query: 8 ADLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKE-SGEWTKLHEYTGHESS 169
A+L GH GPVW+V+WAHPKY LLAS SYD+KVIIW E G W K +E+ HE+S
Sbjct: 52 AELVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIWNEQQGRWQKAYEWAAHEAS 106
Score = 66.9 bits (156), Expect = 1e-11
Identities = 37/85 (43%), Positives = 46/85 (54%)
Frame = +3
Query: 180 IAWAPAEYGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLN 359
+A+AP +YGL LA S+DG I IL Y + W KI H GVNS+ W P SAD
Sbjct: 110 VAFAPHQYGLMLASASADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPG-SAD-- 166
Query: 360 LDPLSNKEAPKRIVTGGCDNLIKIW 434
A KR+V+ G D +KIW
Sbjct: 167 ------PAAKKRLVSAGNDKNVKIW 185
Score = 36.7 bits (81), Expect = 0.014
Identities = 31/137 (22%), Positives = 49/137 (35%), Gaps = 4/137 (2%)
Frame = +3
Query: 180 IAWAPAEYGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLN 359
++WA +YG LA S D + I + + G W AH +++ P
Sbjct: 64 VSWAHPKYGGLLASASYDKKVII--WNEQQGRWQKAYEWAAHEASTTCVAFAP------- 114
Query: 360 LDPLSNKEAPKRIVTGGCDNLIKIWR--EQGDQWVEENRLEMHMDWVRDVAWAPSLG--L 527
+ + + D I I R ++W+ + H V V WAP
Sbjct: 115 ------HQYGLMLASASADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPGSADPA 168
Query: 528 QRSMIASCSQDKRVAIW 578
+ + S DK V IW
Sbjct: 169 AKKRLVSAGNDKNVKIW 185
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 393 RIVTGGCDNLIKIWREQGD-QWVEENRLEMHMDWVRDVAWA-PSLGLQRSMIASCSQDKR 566
R+ T G D L+KI+ + + Q L H V V+WA P G ++AS S DK+
Sbjct: 27 RLATCGSDRLVKIFEVRPNGQSYPMAELVGHSGPVWKVSWAHPKYG---GLLASASYDKK 83
Query: 567 VAIW 578
V IW
Sbjct: 84 VIIW 87
Score = 32.7 bits (71), Expect = 0.23
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Frame = +3
Query: 201 YGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLNLDPLSNK 380
YG LA C SD + I + ++ + ++ G H+ V +SW L L++
Sbjct: 24 YGSRLATCGSDRLVKIFEVRPNGQSYPMAELVG-HSGPVWKVSWAHPKYGGL----LASA 78
Query: 381 EAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAP-SLGLQRSMIASCSQ 557
K+++ IW EQ +W + H VA+AP GL M+AS S
Sbjct: 79 SYDKKVI---------IWNEQQGRWQKAYEWAAHEASTTCVAFAPHQYGL---MLASASA 126
Query: 558 DKRVAIWTSDDN 593
D + I D++
Sbjct: 127 DGDIGILRYDNS 138
>AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical
protein Y43F4B.4 protein.
Length = 363
Score = 55.2 bits (127), Expect = 4e-08
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +2
Query: 8 ADLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKE 121
A K H G VW+V WAHP++ ++A+CSYDR ++IW+E
Sbjct: 56 AHWKCHGGAVWRVIWAHPEFGQIVATCSYDRTIVIWEE 93
Score = 33.9 bits (74), Expect = 0.099
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 390 KRIVTGGCDNLIKIWREQGD-QWVEENRLEMHMDWVRDVAWA-PSLGLQRSMIASCSQDK 563
+R+ T D + IW + D W + H V V WA P G ++A+CS D+
Sbjct: 30 RRMATCASDMTMAIWDRKPDGNWRRSAHWKCHGGAVWRVIWAHPEFG---QIVATCSYDR 86
Query: 564 RVAIW 578
+ IW
Sbjct: 87 TIVIW 91
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 44.8 bits (101), Expect = 5e-05
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 180 IAWAPAEYGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLN 359
+AW+P E GL LA CS+DGSI + + V + AH VN ISW + N
Sbjct: 281 LAWSPTETGL-LASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISW----NRHEN 335
Query: 360 LDPLSNKEAPKRIVTGGCDNLIKIWREQGDQWVEENRL-EMHMDWVRDVAWAPSLGLQRS 536
L IV+GG D +KIW + Q+ + L + H + V W P + +
Sbjct: 336 L-----------IVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPH---ETT 381
Query: 537 MIASCSQDKRVAIW 578
+ +D + IW
Sbjct: 382 TFMASGEDDQTTIW 395
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +3
Query: 396 IVTGGCDNLIKIWR-EQGDQW-VEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRV 569
+ TG I +W+ ++G QW V N L H V D+AW+P+ + ++ASCS D +
Sbjct: 244 LATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPT---ETGLLASCSADGSI 300
Query: 570 AIW 578
+W
Sbjct: 301 KLW 303
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIW 115
L GH V +AW+ P LLASCS D + +W
Sbjct: 271 LTGHKKSVEDLAWS-PTETGLLASCSADGSIKLW 303
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 41.1 bits (92), Expect = 7e-04
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +3
Query: 327 SWCPAISADLNLDPLS----NKEAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWV 494
S P + + + P++ NK+ + I N I I+ + W + L H V
Sbjct: 3 SGVPVLHWNFGIGPITCHAWNKDRTQ-IAVSASSNDIHIFEWRNGDWQSIHTLSEHDLPV 61
Query: 495 RDVAWAPSLGLQRSMIASCSQDKRVAIWTSDDNVSWTPTIL 617
+ W G + + I SCSQDK +WT D NV W P ++
Sbjct: 62 TGLDW----GTKTNRIVSCSQDKNAFVWTFDKNV-WKPELV 97
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYT 154
LKGH V+ VAW+H L AS D+ VI+W E E T + +T
Sbjct: 56 LKGHKDLVYTVAWSHNG--ELFASGGADKLVILWNEKHEGTLRYSHT 100
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYT 154
LKGH V+ VAW+H L AS D+ VI+W E E T + +T
Sbjct: 56 LKGHKDLVYTVAWSHNG--ELFASGGADKLVILWNEKHEGTLRYSHT 100
>AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical
protein Y18D10A.9 protein.
Length = 337
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = +3
Query: 390 KRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRV 569
K +V+ D + +++++ ++ E N+LE H V+ ++ S +A+CS+DK V
Sbjct: 80 KCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFSKS----DEFLATCSRDKSV 135
Query: 570 AIWTSDDN 593
W D++
Sbjct: 136 WFWQQDED 143
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGE-WTKLHEYTG 157
L+ H V QVAW HP +LL SCSYD + ++ GE W + G
Sbjct: 152 LQPHTQDVKQVAW-HPTE-DLLVSCSYDSSIRFYRFDGEDWVTQQKIDG 198
Score = 31.5 bits (68), Expect = 0.53
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 77 LASCSYDRKVIIWK-ESGEWTKLHEYTGHESSV 172
L S S+D V++++ E GE+ ++++ GHES V
Sbjct: 82 LVSASFDASVVVYQQEDGEFAEVNKLEGHESEV 114
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 35 VWQVAWAHPKY*NLLASCSYDRKVIIWKESGE 130
VW W H +LASC D+ V +W GE
Sbjct: 20 VWMTCWHHGG--RILASCGDDKAVRVWSLVGE 49
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 34.7 bits (76), Expect = 0.057
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 351 DLNLDPLSNKEAPKRIVTGGCDNLIKIWREQGD--QWVEENRLEMHMDWVRDVAWAPSLG 524
D+N +S +A I TGG D L+K+W+ Q L H V DV +A +
Sbjct: 479 DVNCVDISESDA--LIATGGMDKLVKLWQVDTHKMQLGIAGTLSGHRRGVGDVKFAKN-- 534
Query: 525 LQRSMIASCSQDKRVAIW 578
+ASCS D + IW
Sbjct: 535 --SHKLASCSGDMTIKIW 550
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSV 172
L GH V V +A K + LASCS D + IW S E + L +GH +V
Sbjct: 519 LSGHRRGVGDVKFA--KNSHKLASCSGDMTIKIWNIS-EKSCLQTISGHSCAV 568
>AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical
protein Y73E7A.9 protein.
Length = 558
Score = 34.3 bits (75), Expect = 0.075
Identities = 25/53 (47%), Positives = 28/53 (52%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSV 172
L+GH G V + W K LLAS S DR V IWK E L TGHE +V
Sbjct: 37 LEGHSGCVNTLRWN--KTGALLASGSDDRNVKIWKSGREIHNL--VTGHEGNV 85
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 33.9 bits (74), Expect = 0.099
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 390 KRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRV 569
++IV+G D IK+W Q + H DWV V ++PS + +I S DK V
Sbjct: 124 RQIVSGSRDKSIKLWNTLA-QCKYTITDDCHTDWVSTVRFSPS--NRDPVIVSAGWDKVV 180
Query: 570 AIW 578
+W
Sbjct: 181 KVW 183
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 33.9 bits (74), Expect = 0.099
Identities = 27/82 (32%), Positives = 39/82 (47%)
Frame = +3
Query: 396 IVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAI 575
I++G D+L+KIW Q V+ L+ H V V + P L L I + S+D V +
Sbjct: 202 IISGADDHLVKIWDYQNKTCVQ--TLDGHAQNVSSVCFHPELPL----IITGSEDSTVRL 255
Query: 576 WTSDDNVSWTPTILNTFDDVVW 641
W + N T LN + VW
Sbjct: 256 WHA--NTYRLETTLNYGLERVW 275
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 17 KGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVN 175
+GH V Q+A +PK N A+ S D+ V +W + G GHE VN
Sbjct: 139 EGHTHYVMQIA-INPKDNNTFATASLDKTVKVW-QFGSNVPNFTLEGHEKGVN 189
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 375 NKEAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAW 509
NK + +++ GCD + IW + + V + DW+R+V W
Sbjct: 265 NKADDRLVISSGCDGQVVIWNHETSE-VLGGVGSLQGDWIRNVKW 308
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 375 NKEAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAW 509
NK + +++ GCD + IW + + V + DW+R+V W
Sbjct: 265 NKADDRLVISSGCDGQVVIWNHETSE-VLGGVGSLQGDWIRNVKW 308
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 8 ADLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSV 172
A L+GH GPV+QVAW+ LL S S D + ++ E + ++ GH V
Sbjct: 396 ASLRGHVGPVYQVAWSADS--RLLVSGSADSTLKVF-ELKTKSLYYDLPGHGDEV 447
Score = 29.9 bits (64), Expect = 1.6
Identities = 38/141 (26%), Positives = 57/141 (40%)
Frame = +3
Query: 174 ILIAWAPAEYGLTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISAD 353
+ IAW+P + AC +G I I + TG + K H + S++W P
Sbjct: 151 LCIAWSPDATKIASAC--KNGEICI--WNAKTGE-QIGKTLKRHKQWITSLAWQP----- 200
Query: 354 LNLDPLSNKEAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQR 533
++ DP + + + G D I IW Q L H V + W
Sbjct: 201 MHKDPTC-----RLLASCGKDGNIFIWDTV--QGTVVRCLSGHTASVTCLRWGGE----- 248
Query: 534 SMIASCSQDKRVAIWTSDDNV 596
+I S SQD+ V +W +DD V
Sbjct: 249 GLIYSGSQDRTVKMWRADDGV 269
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/63 (23%), Positives = 31/63 (49%)
Frame = +3
Query: 396 IVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAI 575
+ +G D ++IW + + + + + H WV +AW+P + IAS ++ + I
Sbjct: 120 LASGSGDQTMRIWDIELE--LPLHTCKSHKSWVLCIAWSP----DATKIASACKNGEICI 173
Query: 576 WTS 584
W +
Sbjct: 174 WNA 176
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 38 WQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSV 172
WQ P LLASC D + IW ++ + T + +GH +SV
Sbjct: 198 WQPMHKDPTC-RLLASCGKDGNIFIW-DTVQGTVVRCLSGHTASV 240
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +3
Query: 396 IVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAI 575
+V+G D +KIWR + E + H + V V + P+ L I S S+DK + +
Sbjct: 222 LVSGSDDRQVKIWRYNETKAWELDSCRGHYNNVSSVIFHPNADL----ILSNSEDKSIRV 277
Query: 576 WTSDDNVS 599
W S
Sbjct: 278 WDMQKRTS 285
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 71 NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNS 178
N+L SC+ D V +W + E T +H +GH S++ S
Sbjct: 472 NILVSCNADSHVRVW-DIHEGTCVHMLSGHRSAITS 506
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 71 NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNS 178
N+L SC+ D V +W + E T +H +GH S++ S
Sbjct: 474 NILVSCNADSHVRVW-DIHEGTCVHMLSGHRSAITS 508
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 17 KGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSV 172
+GH V + W PK +L SCS D K+ +W+ + Y GH+ V
Sbjct: 272 RGHNKGVNFLQW-FPKSAHLFLSCSMDTKIKLWEVYDRQRVVRTYAGHKLPV 322
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 71 NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNS 178
N+L SC+ D V +W + E T +H +GH S++ S
Sbjct: 474 NILVSCNADSHVRVW-DIHEGTCVHMLSGHRSAITS 508
>AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical
protein C18E3.5 protein.
Length = 331
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSV 172
L+GH G ++ ++ + LAS YD+++ +W GE GH+ ++
Sbjct: 32 LQGHGGEIYTSQFSSDG--SFLASAGYDQQIFLWNVFGECENFAVLKGHKGAI 82
>U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical
protein C54G7.4 protein.
Length = 1199
Score = 31.1 bits (67), Expect = 0.70
Identities = 29/130 (22%), Positives = 50/130 (38%)
Frame = +3
Query: 213 LACCSSDGSISILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLNLDPLSNKEAPK 392
+AC + G + ++ D D+ K P A + VN + + + E +
Sbjct: 29 IACGGALGKLKVVKIGTDAT--DLNKSPNAATLVVNQA----LEGHNATVMNATWNENNQ 82
Query: 393 RIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVA 572
++ T LI +W +QW EE + V + W L+ + IA D V
Sbjct: 83 KLTTSDTSGLIIVWGMFNEQWCEEMINNRNKSVVVSICW----NLEGTKIAIAYADGNVI 138
Query: 573 IWTSDDNVSW 602
+ T + N W
Sbjct: 139 VGTLEGNRIW 148
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 399 VTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIW 578
++ D +K+W + + E H D V DVAW+P + ++ AS D + +W
Sbjct: 505 ISSSHDWTVKLWSTKDANL--KFSFESHPDLVLDVAWSP---VHPAVFASIDADGNIFVW 559
Query: 579 TSDDNV 596
+++V
Sbjct: 560 NLNEDV 565
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 30.7 bits (66), Expect = 0.93
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWK-ESGEWTKLHEYTGHESSVN 175
L GH P+ +V + HP + ++ASCS D + +W E+G+ + GH +VN
Sbjct: 102 LTGHRLPITRVIF-HPLW-TIMASCSEDATIKVWDYETGQLER--TLKGHTDAVN 152
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 5 EADLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNS 178
E LKGH V +A L SCS D + +W + L GHE +V+S
Sbjct: 141 ERTLKGHTDAVNDIAIDAAG--KQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSS 196
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 30.7 bits (66), Expect = 0.93
Identities = 21/68 (30%), Positives = 38/68 (55%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSDSLGS 193
LK H ++QV+++ P Y +LAS D +VI+W + +K+ + S+ +SDS+
Sbjct: 304 LKHHNDEIFQVSFS-PHYETVLASSGSDDRVIVW----DISKIQD-PSSSSAASSDSVPP 357
Query: 194 R*IWLDLG 217
I++ G
Sbjct: 358 EVIFIHAG 365
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSV 172
L GH G ++ A++ LA+ YD+K+ W GE GH +V
Sbjct: 34 LLGHEGEIYTGAFSPDG--TCLATSGYDQKIFFWNVYGECENFSTIKGHSGAV 84
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +3
Query: 381 EAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQD 560
++ ++++GG DN++K+W + D+ L H D + ++ +PS I S S D
Sbjct: 175 DSSDQVISGGIDNVLKVWDMRRDEIT--YTLTGHRDTITGISLSPS----GKFIISNSMD 228
Query: 561 KRVAIW 578
V W
Sbjct: 229 CTVRQW 234
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 30.7 bits (66), Expect = 0.93
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = +2
Query: 23 HFGPVWQVAWAHPKY*NLLASCSYDRKVIIW--KESGEWTKLH----EYTGHESSVNS 178
H P +VAW+ P N++ASCS D +W + G L E TGH+ VN+
Sbjct: 78 HKAPCLEVAWS-PFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNT 134
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 498 DVAWAPSLGLQRSMIASCSQDKRVAIWTSDD 590
+VAW+P ++IASCS+D +W D
Sbjct: 84 EVAWSP---FNDNVIASCSEDTTCKVWVIPD 111
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 30.7 bits (66), Expect = 0.93
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = +2
Query: 23 HFGPVWQVAWAHPKY*NLLASCSYDRKVIIW--KESGEWTKLH----EYTGHESSVNS 178
H P +VAW+ P N++ASCS D +W + G L E TGH+ VN+
Sbjct: 78 HKAPCLEVAWS-PFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNT 134
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 498 DVAWAPSLGLQRSMIASCSQDKRVAIWTSDD 590
+VAW+P ++IASCS+D +W D
Sbjct: 84 EVAWSP---FNDNVIASCSEDTTCKVWVIPD 111
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 30.7 bits (66), Expect = 0.93
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = +2
Query: 23 HFGPVWQVAWAHPKY*NLLASCSYDRKVIIW--KESGEWTKLH----EYTGHESSVNS 178
H P +VAW+ P N++ASCS D +W + G L E TGH+ VN+
Sbjct: 78 HKAPCLEVAWS-PFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNT 134
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 498 DVAWAPSLGLQRSMIASCSQDKRVAIWTSDD 590
+VAW+P ++IASCS+D +W D
Sbjct: 84 EVAWSP---FNDNVIASCSEDTTCKVWVIPD 111
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 30.7 bits (66), Expect = 0.93
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = +2
Query: 23 HFGPVWQVAWAHPKY*NLLASCSYDRKVIIW--KESGEWTKLH----EYTGHESSVNS 178
H P +VAW+ P N++ASCS D +W + G L E TGH+ VN+
Sbjct: 78 HKAPCLEVAWS-PFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNT 134
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 498 DVAWAPSLGLQRSMIASCSQDKRVAIWTSDD 590
+VAW+P ++IASCS+D +W D
Sbjct: 84 EVAWSP---FNDNVIASCSEDTTCKVWVIPD 111
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 30.7 bits (66), Expect = 0.93
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 14 LKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWK-ESGEWTKLHEYTGHESSVN 175
L GH P+ +V + HP + ++ASCS D + +W E+G+ + GH +VN
Sbjct: 102 LTGHRLPITRVIF-HPLW-TIMASCSEDATIKVWDYETGQLER--TLKGHTDAVN 152
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 5 EADLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNS 178
E LKGH V +A L SCS D + +W + L GHE +V+S
Sbjct: 141 ERTLKGHTDAVNDIAIDAAG--KQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSS 196
>AF101309-3|AAN60514.1| 760|Caenorhabditis elegans Hypothetical
protein H24G06.1c protein.
Length = 760
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +3
Query: 243 SILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLNLDPLSNKEAPKRIVTGGCDNL 422
S++ + ++ +W ++ H VN I P+ S L + L +TGG D
Sbjct: 364 SLIEFARENKSWSFRRASLGHTGSVNCIEPFPSSSPCLPIGTL---------ITGGSDGT 414
Query: 423 IKIWREQGD 449
I+ W GD
Sbjct: 415 IRFWNFNGD 423
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +3
Query: 243 SILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLNLDPLSNKEAPKRIVTGGCDNL 422
S++ + ++ +W ++ H VN I P+ S L + L +TGG D
Sbjct: 364 SLIEFARENKSWSFRRASLGHTGSVNCIEPFPSSSPCLPIGTL---------ITGGSDGT 414
Query: 423 IKIWREQGD 449
I+ W GD
Sbjct: 415 IRFWNFNGD 423
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +3
Query: 243 SILAYVQDTGNWDVKKIPGAHAIGVNSISWCPAISADLNLDPLSNKEAPKRIVTGGCDNL 422
S++ + ++ +W ++ H VN I P+ S L + L +TGG D
Sbjct: 364 SLIEFARENKSWSFRRASLGHTGSVNCIEPFPSSSPCLPIGTL---------ITGGSDGT 414
Query: 423 IKIWREQGD 449
I+ W GD
Sbjct: 415 IRFWNFNGD 423
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 29.5 bits (63), Expect = 2.1
Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 5/133 (3%)
Frame = +3
Query: 204 GLTLACCSSDGSISILAYVQDTGNWDVKK--IPGAHAIGVNSISWCPAISADLNLDPLSN 377
G L SSD + I + + DV+ + G A G + S+ L+L
Sbjct: 299 GRVLLTASSDKTCIIWKEIDNLWRDDVRLGIVGGGQAAGF----FAAVFSSSLDLKDSGE 354
Query: 378 KEAPKRIVTGGCDNLIKIWREQGDQWVEENRLEM---HMDWVRDVAWAPSLGLQRSMIAS 548
K A +++ + W+ +Q L M H+ VRDV W S + S
Sbjct: 355 KNAENVVISSSYFGGLHCWKSTDEQKTFWTALPMTGGHVGEVRDVDWHRSDDGDSGFLMS 414
Query: 549 CSQDKRVAIWTSD 587
QD+ ++ +
Sbjct: 415 VGQDQTTRVFAKN 427
>AF216968-1|AAF60253.2| 658|Caenorhabditis elegans semaphorin-2a
protein.
Length = 658
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 12/72 (16%)
Frame = +3
Query: 423 IKIWREQGDQW----VEENRLEMHMDWVRDVAWAPS--------LGLQRSMIASCSQDKR 566
I W+E G++W +EE L++ + DVA P+ G+ + +A CS+
Sbjct: 426 ISHWKE-GNEWKSNLIEEKSLKIAASRINDVALLPAEFFFVTSGAGVSQFSVARCSEQPS 484
Query: 567 VAIWTSDDNVSW 602
A+ + D SW
Sbjct: 485 CALCSLDPYCSW 496
>AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation
defective protein 1 protein.
Length = 620
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 414 DNLIKIWRE--QGDQWVEE-NRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIWTS 584
D K W E +GDQ++ + N + H V V + P L ++ SCS D + +W
Sbjct: 198 DRAGKQWSETVRGDQYIIDLNITKGHTATVNCVEFNP---LNKNEFISCSDDGSLRLWNL 254
Query: 585 DDN 593
DD+
Sbjct: 255 DDH 257
>AC025726-1|AAK73921.1| 658|Caenorhabditis elegans Male abnormal
protein 20, isoform a protein.
Length = 658
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 12/72 (16%)
Frame = +3
Query: 423 IKIWREQGDQW----VEENRLEMHMDWVRDVAWAPS--------LGLQRSMIASCSQDKR 566
I W+E G++W +EE L++ + DVA P+ G+ + +A CS+
Sbjct: 426 ISHWKE-GNEWKSNLIEEKSLKIAASRINDVALLPAEFFFVTSGAGVSQFSVARCSEQPS 484
Query: 567 VAIWTSDDNVSW 602
A+ + D SW
Sbjct: 485 CALCSLDPYCSW 496
>U22831-9|AAN63388.1| 412|Caenorhabditis elegans Hypothetical
protein F47D12.9b protein.
Length = 412
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 378 KEAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMH 482
K P+ +VT G D++I+IW +W + +EMH
Sbjct: 295 KTRPECVVTEGFDSIIRIW---DFRWPKNPMMEMH 326
>U22831-8|AAK20070.2| 545|Caenorhabditis elegans Hypothetical
protein F47D12.9a protein.
Length = 545
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 378 KEAPKRIVTGGCDNLIKIWREQGDQWVEENRLEMH 482
K P+ +VT G D++I+IW +W + +EMH
Sbjct: 428 KTRPECVVTEGFDSIIRIW---DFRWPKNPMMEMH 459
>AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical
protein T02H6.1b protein.
Length = 528
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 2 HEADLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIW 115
H DL GH GP++ + + N L S S DR V +W
Sbjct: 240 HIKDLSGHRGPIFSLTFQLKT--NNLYSASQDRSVKMW 275
>AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical
protein T02H6.1a protein.
Length = 550
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 2 HEADLKGHFGPVWQVAWAHPKY*NLLASCSYDRKVIIW 115
H DL GH GP++ + + N L S S DR V +W
Sbjct: 240 HIKDLSGHRGPIFSLTFQLKT--NNLYSASQDRSVKMW 275
>U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform a protein.
Length = 1050
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 379 LLLSGSKFKSADIAGHQLMELTPMACAPGIFFTSQLPVSWTYASIEI 239
+ L +KF SA + ME ACA G+ T PV SIE+
Sbjct: 278 MCLLAAKFDSAYREESRRMECLAAACAVGVACTFSSPVGGVLFSIEV 324
>U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform b protein.
Length = 1085
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 379 LLLSGSKFKSADIAGHQLMELTPMACAPGIFFTSQLPVSWTYASIEI 239
+ L +KF SA + ME ACA G+ T PV SIE+
Sbjct: 278 MCLLAAKFDSAYREESRRMECLAAACAVGVACTFSSPVGGVLFSIEV 324
>AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type
chloride channel CLH-4b protein.
Length = 1084
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 379 LLLSGSKFKSADIAGHQLMELTPMACAPGIFFTSQLPVSWTYASIEI 239
+ L +KF SA + ME ACA G+ T PV SIE+
Sbjct: 278 MCLLAAKFDSAYREESRRMECLAAACAVGVACTFSSPVGGVLFSIEV 324
>AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 978
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 379 LLLSGSKFKSADIAGHQLMELTPMACAPGIFFTSQLPVSWTYASIEI 239
+ L +KF SA + ME ACA G+ T PV SIE+
Sbjct: 206 MCLLAAKFDSAYREESRRMECLAAACAVGVACTFSSPVGGVLFSIEV 252
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical
protein C10C6.1 protein.
Length = 1565
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 207 LTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIG 314
+TL S+ S++A VQDT W + +P G
Sbjct: 170 ITLRTYSARNGSSLMAPVQDTRRWSLASLPSTSGYG 205
>Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical
protein T06E6.1 protein.
Length = 431
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 381 EAPKRIVTGGCDNLIKIWR-EQGDQ-WVEEN 467
E P+ IVTGG NL+K W E G Q W +N
Sbjct: 129 EKPE-IVTGGMKNLLKTWNLETGQQTWSAKN 158
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +3
Query: 402 TGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIWT 581
+GG D +IKIW Q + L H+ VR V +P + + S +DK+V W
Sbjct: 201 SGGADRIIKIWDLASGQL--KLSLTGHISSVRAVKVSP----RHPFLFSGGEDKQVKCWD 254
Query: 582 SDDN 593
+ N
Sbjct: 255 LEYN 258
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +3
Query: 402 TGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIWT 581
+GG D +IKIW Q + L H+ VR V +P + + S +DK+V W
Sbjct: 201 SGGADRIIKIWDLASGQL--KLSLTGHISSVRAVKVSP----RHPFLFSGGEDKQVKCWD 254
Query: 582 SDDN 593
+ N
Sbjct: 255 LEYN 258
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 207 LTLACCSSDGSISILAYVQDTGNWDVKKIPGAHAIG 314
+TL S+ S++A VQDT W + +P G
Sbjct: 170 ITLRTYSARNGSSLMAPVQDTRRWSLASLPSTSGYG 205
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 480 HMDWVRDVAWAPSLGLQRSMIASCSQDKRVAIWTSD 587
H V VAW P+ +M+ SC D + +W+ D
Sbjct: 564 HRGHVNAVAWNPA---DPTMLVSCGADATIRVWSLD 596
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 77 LASCSYDRKVIIWKESGEWTKLHEYTGH 160
L S S DRK+ +W EW E+ H
Sbjct: 206 LISASDDRKIRVWDWENEWRMEQEFQEH 233
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 8 ADLKGHFGPVWQVAWAHP 61
A KGHFGP+ +AW HP
Sbjct: 281 ARFKGHFGPINTMAW-HP 297
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,430,001
Number of Sequences: 27780
Number of extensions: 364005
Number of successful extensions: 1121
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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