Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_P11
         (644 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    24   1.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   3.3  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   7.7  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 184 FYDLILKQSYFFTPTLKNRSN 122
           F  +IL  SYF TPT+  + N
Sbjct: 11  FLSVILITSYFVTPTMSIKCN 31


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = -1

Query: 629 VMSVPP--KEQPAATVSQYSSNREAHEHQCSTK*SSKNYGWVDNAHILHQRPHTHT 468
           ++ +PP  K    +T S  S + E+   +     SSK+ GW    +I+H  P   T
Sbjct: 414 LLEIPPIRKISDCSTTSSLSGD-ESDVVELQPVKSSKSSGWRKLRNIVHWTPFFQT 468


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 208 MLGVMITKFYDLILKQSYFFTPTLKNRSN 122
           ++G  IT F+DL+     F   ++ NR+N
Sbjct: 238 LVGKKITHFFDLVRPLIAFKFHSILNRTN 266


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 200 SHDNKILRLDTETKLFLYSNSKESFQYL 117
           S +  +  +D +  L +Y N+ +SF  L
Sbjct: 197 STNTMVYMVDNKNTLIIYQNADDSFHRL 224


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,631
Number of Sequences: 438
Number of extensions: 4568
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)