Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_P10
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical pr... 281 3e-76
D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese super... 281 3e-76
D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese super... 281 3e-76
X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese super... 268 2e-72
X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese super... 268 2e-72
U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide... 268 2e-72
U97193-4|AAB52439.1| 691|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81555-3|CAB04513.1| 221|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF026555-1|AAB97516.1| 221|Caenorhabditis elegans GATA transcri... 28 5.2
U88176-4|ABB51191.1| 427|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF039046-13|AAB94213.1| 551|Caenorhabditis elegans Hypothetical... 28 6.9
U80450-2|AAK77614.1| 252|Caenorhabditis elegans Hypothetical pr... 27 9.1
U80450-1|AAK77613.1| 244|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical
protein F10D11.1 protein.
Length = 221
Score = 281 bits (689), Expect = 3e-76
Identities = 123/185 (66%), Positives = 152/185 (82%)
Frame = +1
Query: 112 IRTIGASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAK 291
I + A R KH+LP+LP++Y+ LEPVIS +IM LHH KHHATYVNNLN EEKL +A +K
Sbjct: 16 ITGVAAVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 292 GDIDTIISLAPALKFNGGGHINHSIFWKNLSPNGGKPSDVLTKAVEKDFGSWENMKNQLA 471
G++ I+L PALKFNGGGHINHSIFW NL+ +GG+PS L A++ DFGS +N++ QL+
Sbjct: 76 GNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDFGSLDNLQKQLS 135
Query: 472 TASVAVQGSGWGWLGFNKQMKKLQIATCQNQDPLQATTGLIPLFGIDVWEHAYYLQYKNV 651
++VAVQGSGWGWLG+ + K L++ATC NQDPL+ATTGL+PLFGIDVWEHAYYLQYKNV
Sbjct: 136 ASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVWEHAYYLQYKNV 195
Query: 652 RADYV 666
R DYV
Sbjct: 196 RPDYV 200
>D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 221
Score = 281 bits (689), Expect = 3e-76
Identities = 123/185 (66%), Positives = 152/185 (82%)
Frame = +1
Query: 112 IRTIGASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAK 291
I + A R KH+LP+LP++Y+ LEPVIS +IM LHH KHHATYVNNLN EEKL +A +K
Sbjct: 16 ITGVAAVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 292 GDIDTIISLAPALKFNGGGHINHSIFWKNLSPNGGKPSDVLTKAVEKDFGSWENMKNQLA 471
G++ I+L PALKFNGGGHINHSIFW NL+ +GG+PS L A++ DFGS +N++ QL+
Sbjct: 76 GNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDFGSLDNLQKQLS 135
Query: 472 TASVAVQGSGWGWLGFNKQMKKLQIATCQNQDPLQATTGLIPLFGIDVWEHAYYLQYKNV 651
++VAVQGSGWGWLG+ + K L++ATC NQDPL+ATTGL+PLFGIDVWEHAYYLQYKNV
Sbjct: 136 ASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVWEHAYYLQYKNV 195
Query: 652 RADYV 666
R DYV
Sbjct: 196 RPDYV 200
>D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese
superoxide dismutaseprecursor protein.
Length = 221
Score = 281 bits (689), Expect = 3e-76
Identities = 123/185 (66%), Positives = 152/185 (82%)
Frame = +1
Query: 112 IRTIGASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAK 291
I + A R KH+LP+LP++Y+ LEPVIS +IM LHH KHHATYVNNLN EEKL +A +K
Sbjct: 16 ITGVAAVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 292 GDIDTIISLAPALKFNGGGHINHSIFWKNLSPNGGKPSDVLTKAVEKDFGSWENMKNQLA 471
G++ I+L PALKFNGGGHINHSIFW NL+ +GG+PS L A++ DFGS +N++ QL+
Sbjct: 76 GNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDFGSLDNLQKQLS 135
Query: 472 TASVAVQGSGWGWLGFNKQMKKLQIATCQNQDPLQATTGLIPLFGIDVWEHAYYLQYKNV 651
++VAVQGSGWGWLG+ + K L++ATC NQDPL+ATTGL+PLFGIDVWEHAYYLQYKNV
Sbjct: 136 ASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVWEHAYYLQYKNV 195
Query: 652 RADYV 666
R DYV
Sbjct: 196 RPDYV 200
>X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese
superoxide dismutase protein.
Length = 218
Score = 268 bits (658), Expect = 2e-72
Identities = 119/180 (66%), Positives = 147/180 (81%)
Frame = +1
Query: 127 ASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAKGDIDT 306
A R KHTLP+LPF+Y+ LEPVIS +IM LHH KHHATYVNNLN EEKL +A +KG++
Sbjct: 21 AVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNLKE 80
Query: 307 IISLAPALKFNGGGHINHSIFWKNLSPNGGKPSDVLTKAVEKDFGSWENMKNQLATASVA 486
I+L PALKFNGGGHINHSIFW NL+ +GG+PS L +++DFGS +N++ +L+ ++A
Sbjct: 81 AIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLSDITIA 140
Query: 487 VQGSGWGWLGFNKQMKKLQIATCQNQDPLQATTGLIPLFGIDVWEHAYYLQYKNVRADYV 666
VQGSGWGWLG+ K+ K L+IATC NQDPL+ G++PLFGIDVWEHAYYLQYKNVR DYV
Sbjct: 141 VQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYKNVRPDYV 197
>X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 218
Score = 268 bits (658), Expect = 2e-72
Identities = 119/180 (66%), Positives = 147/180 (81%)
Frame = +1
Query: 127 ASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAKGDIDT 306
A R KHTLP+LPF+Y+ LEPVIS +IM LHH KHHATYVNNLN EEKL +A +KG++
Sbjct: 21 AVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNLKE 80
Query: 307 IISLAPALKFNGGGHINHSIFWKNLSPNGGKPSDVLTKAVEKDFGSWENMKNQLATASVA 486
I+L PALKFNGGGHINHSIFW NL+ +GG+PS L +++DFGS +N++ +L+ ++A
Sbjct: 81 AIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLSDITIA 140
Query: 487 VQGSGWGWLGFNKQMKKLQIATCQNQDPLQATTGLIPLFGIDVWEHAYYLQYKNVRADYV 666
VQGSGWGWLG+ K+ K L+IATC NQDPL+ G++PLFGIDVWEHAYYLQYKNVR DYV
Sbjct: 141 VQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYKNVRPDYV 197
>U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide
dismutase) protein3 protein.
Length = 218
Score = 268 bits (658), Expect = 2e-72
Identities = 119/180 (66%), Positives = 147/180 (81%)
Frame = +1
Query: 127 ASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAKGDIDT 306
A R KHTLP+LPF+Y+ LEPVIS +IM LHH KHHATYVNNLN EEKL +A +KG++
Sbjct: 21 AVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNLKE 80
Query: 307 IISLAPALKFNGGGHINHSIFWKNLSPNGGKPSDVLTKAVEKDFGSWENMKNQLATASVA 486
I+L PALKFNGGGHINHSIFW NL+ +GG+PS L +++DFGS +N++ +L+ ++A
Sbjct: 81 AIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLSDITIA 140
Query: 487 VQGSGWGWLGFNKQMKKLQIATCQNQDPLQATTGLIPLFGIDVWEHAYYLQYKNVRADYV 666
VQGSGWGWLG+ K+ K L+IATC NQDPL+ G++PLFGIDVWEHAYYLQYKNVR DYV
Sbjct: 141 VQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYKNVRPDYV 197
>U97193-4|AAB52439.1| 691|Caenorhabditis elegans Hypothetical
protein C06A5.6 protein.
Length = 691
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 77 SRCWHLAELDLLSAP*ERLVKNIRFPNYLS 166
S+C H++++D+L +IRFP+YL+
Sbjct: 69 SKCRHISDVDILELKKNTANADIRFPSYLN 98
>Z81555-3|CAB04513.1| 221|Caenorhabditis elegans Hypothetical
protein F58E10.2 protein.
Length = 221
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 556 QNQDPLQATTGLIPLFGIDVWEHAYYLQYKNVRADY 663
Q+ DP Q +T + P+FG + Y QY + DY
Sbjct: 72 QSYDPAQQSTPVHPMFGSLDMMNCYSQQYPQIGQDY 107
>AF026555-1|AAB97516.1| 221|Caenorhabditis elegans GATA
transcription factor END-1 protein.
Length = 221
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 556 QNQDPLQATTGLIPLFGIDVWEHAYYLQYKNVRADY 663
Q+ DP Q +T + P+FG + Y QY + DY
Sbjct: 72 QSYDPAQQSTPVHPMFGSLDMMNCYSQQYPQIGQDY 107
>U88176-4|ABB51191.1| 427|Caenorhabditis elegans Hypothetical
protein F18F11.3 protein.
Length = 427
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Frame = -2
Query: 466 IGSSCSPMSQNL----FQLLWSTHQKVCHRLVIN 377
+ SC+ ++ ++ F LLW H KV H VIN
Sbjct: 44 VALSCTSLNSSILFFIFLLLWVNHNKVIHTQVIN 77
>AF039046-13|AAB94213.1| 551|Caenorhabditis elegans Hypothetical
protein R09B5.4 protein.
Length = 551
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -3
Query: 294 TFSLSLCQFLLGSI*IVNISSMMLGVMQI 208
+F +SLC L+G + +V+I + GV+Q+
Sbjct: 81 SFCVSLCMDLMGGMRVVSIEQLFEGVLQM 109
>U80450-2|AAK77614.1| 252|Caenorhabditis elegans Hypothetical
protein M01E11.4b protein.
Length = 252
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = +1
Query: 115 RTIGASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAKG 294
R + SR P +PFE+ E +RD++ HH K A Y NA E A KG
Sbjct: 146 RVLSRSRFNPHQP-IPFEWVQGEQYRNRDVLGFHHHK-IAKY--EANADEVLFGDADVKG 201
>U80450-1|AAK77613.1| 244|Caenorhabditis elegans Hypothetical
protein M01E11.4a protein.
Length = 244
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = +1
Query: 115 RTIGASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAKG 294
R + SR P +PFE+ E +RD++ HH K A Y NA E A KG
Sbjct: 138 RVLSRSRFNPHQP-IPFEWVQGEQYRNRDVLGFHHHK-IAKY--EANADEVLFGDADVKG 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,303,497
Number of Sequences: 27780
Number of extensions: 367843
Number of successful extensions: 907
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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