Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_P07
         (401 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065543-1|BAC05788.1|  324|Homo sapiens seven transmembrane hel...    31   1.4  
AB065452-1|BAC05714.1|  324|Homo sapiens seven transmembrane hel...    31   1.4  
BC131742-1|AAI31743.1|  314|Homo sapiens taste receptor, type 2,...    29   5.8  
AY724953-1|AAU21149.1|  314|Homo sapiens taste receptor T2R55 pr...    29   5.8  
AB199242-1|BAD98114.1|  297|Homo sapiens bitter taste receptor T...    29   5.8  
AB199241-1|BAD98113.1|  257|Homo sapiens bitter taste receptor T...    29   5.8  
AB199240-1|BAD98112.1|  284|Homo sapiens bitter taste receptor T...    29   5.8  

>AB065543-1|BAC05788.1|  324|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 324

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
 Frame = +1

Query: 271 ISCT--QLLRLVQFSLCYYVVTHTHIYILFITYILICILWTYI 393
           +SCT  Q+ +L+ F+LC ++ T T + ++FI+Y   CIL T +
Sbjct: 187 LSCTDTQINQLLLFALCSFIQTSTFV-VIFISY--FCILITVL 226


>AB065452-1|BAC05714.1|  324|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 324

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
 Frame = +1

Query: 271 ISCT--QLLRLVQFSLCYYVVTHTHIYILFITYILICILWTYI 393
           +SCT  Q+ +L+ F+LC ++ T T + ++FI+Y   CIL T +
Sbjct: 187 LSCTDTQINQLLLFALCSFIQTSTFV-VIFISY--FCILITVL 226


>BC131742-1|AAI31743.1|  314|Homo sapiens taste receptor, type 2,
           member 42 protein.
          Length = 314

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 132 DQVFVGVARHLGCENRVRIPLMVVWHQTRGYGTPLPNLLSI 254
           D   VG+A HL    R+   ++++WH T    T L   LSI
Sbjct: 65  DSFLVGLASHLYTTYRLGKTVIMLWHMTNHLTTWLATCLSI 105


>AY724953-1|AAU21149.1|  314|Homo sapiens taste receptor T2R55
           protein.
          Length = 314

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 132 DQVFVGVARHLGCENRVRIPLMVVWHQTRGYGTPLPNLLSI 254
           D   VG+A HL    R+   ++++WH T    T L   LSI
Sbjct: 65  DSFLVGLASHLYTTYRLGKTVIMLWHMTNHLTTWLATCLSI 105


>AB199242-1|BAD98114.1|  297|Homo sapiens bitter taste receptor
           T2R55 protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 132 DQVFVGVARHLGCENRVRIPLMVVWHQTRGYGTPLPNLLSI 254
           D   VG+A HL    R+   ++++WH T    T L   LSI
Sbjct: 60  DSFLVGLASHLYTTYRLGKTVIMLWHMTNHLTTWLATCLSI 100


>AB199241-1|BAD98113.1|  257|Homo sapiens bitter taste receptor
           T2R55 protein.
          Length = 257

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 132 DQVFVGVARHLGCENRVRIPLMVVWHQTRGYGTPLPNLLSI 254
           D   VG+A HL    R+   ++++WH T    T L   LSI
Sbjct: 38  DSFLVGLASHLYTTYRLGKTVIMLWHMTNHLTTWLATCLSI 78


>AB199240-1|BAD98112.1|  284|Homo sapiens bitter taste receptor
           T2R55 protein.
          Length = 284

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 132 DQVFVGVARHLGCENRVRIPLMVVWHQTRGYGTPLPNLLSI 254
           D   VG+A HL    R+   ++++WH T    T L   LSI
Sbjct: 54  DSFLVGLASHLYTTYRLGKTVIMLWHMTNHLTTWLATCLSI 94


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,993,335
Number of Sequences: 237096
Number of extensions: 1081446
Number of successful extensions: 2099
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2087
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)