Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_P07
         (401 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094843-1|AAM11196.1|  547|Drosophila melanogaster RE01910p pro...    29   2.3  
AY061833-1|AAL27644.1|  998|Drosophila melanogaster SD07678p pro...    29   2.3  
AL133505-3|CAB65842.1|  649|Drosophila melanogaster EG:BACH59J11...    29   2.3  
AE014298-401|AAF45782.2|  547|Drosophila melanogaster CG32796-PA...    29   2.3  
AE014298-400|AAF45784.2|  998|Drosophila melanogaster CG32796-PB...    29   2.3  

>AY094843-1|AAM11196.1|  547|Drosophila melanogaster RE01910p
           protein.
          Length = 547

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -3

Query: 273 NNDAVSESRGDSAKACRTRASGAIPPSAGYAPCSHNLGVALHQQTLDPI 127
           N+DA SE    + +  RTR +   P S+   P   N  V  HQ +L P+
Sbjct: 234 NSDAASEF--SAIRQARTRKTHEQPASSSATPVPANKAVEQHQNSLYPL 280


>AY061833-1|AAL27644.1|  998|Drosophila melanogaster SD07678p
           protein.
          Length = 998

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -3

Query: 273 NNDAVSESRGDSAKACRTRASGAIPPSAGYAPCSHNLGVALHQQTLDPI 127
           N+DA SE    + +  RTR +   P S+   P   N  V  HQ +L P+
Sbjct: 685 NSDAASEF--SAIRQARTRKTHEQPASSSATPVPANKAVEQHQNSLYPL 731


>AL133505-3|CAB65842.1|  649|Drosophila melanogaster EG:BACH59J11.2
           protein.
          Length = 649

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -3

Query: 273 NNDAVSESRGDSAKACRTRASGAIPPSAGYAPCSHNLGVALHQQTLDPI 127
           N+DA SE    + +  RTR +   P S+   P   N  V  HQ +L P+
Sbjct: 218 NSDAASEF--SAIRQARTRKTHEQPASSSATPVPANKAVEQHQNSLYPL 264


>AE014298-401|AAF45782.2|  547|Drosophila melanogaster CG32796-PA,
           isoform A protein.
          Length = 547

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -3

Query: 273 NNDAVSESRGDSAKACRTRASGAIPPSAGYAPCSHNLGVALHQQTLDPI 127
           N+DA SE    + +  RTR +   P S+   P   N  V  HQ +L P+
Sbjct: 234 NSDAASEF--SAIRQARTRKTHEQPASSSATPVPANKAVEQHQNSLYPL 280


>AE014298-400|AAF45784.2|  998|Drosophila melanogaster CG32796-PB,
           isoform B protein.
          Length = 998

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -3

Query: 273 NNDAVSESRGDSAKACRTRASGAIPPSAGYAPCSHNLGVALHQQTLDPI 127
           N+DA SE    + +  RTR +   P S+   P   N  V  HQ +L P+
Sbjct: 685 NSDAASEF--SAIRQARTRKTHEQPASSSATPVPANKAVEQHQNSLYPL 731


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,905,077
Number of Sequences: 53049
Number of extensions: 349699
Number of successful extensions: 967
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)