Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_P06
(547 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces pom... 29 0.59
SPAC18G6.01c |||conserved fungal protein|Schizosaccharomyces pom... 27 1.8
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 27 1.8
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 27 2.4
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 26 3.2
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.2
SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomy... 26 4.2
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 26 4.2
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 25 7.3
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 25 7.3
SPBC4B4.12c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 7.3
SPCC1795.01c |mad3|SPCC895.02|mitotic spindle checkpoint protein... 25 7.3
SPBC1604.07 |atp4||F0-ATPase subunit|Schizosaccharomyces pombe|c... 25 7.3
SPCC622.14 |||GTPase activating protein |Schizosaccharomyces pom... 25 7.3
SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces po... 25 9.6
SPAC1D4.05c |||Erd1 homolog|Schizosaccharomyces pombe|chr 1|||Ma... 25 9.6
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 25 9.6
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 25 9.6
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 9.6
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 25 9.6
>SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 28.7 bits (61), Expect = 0.59
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 207 GSPTAPEIPPEEYSLNENEERAIIEPRSLEDPRVKELIQVLIDWINDELAPHRIIV 374
G P A E+PP+++ + ++ +A++EP+ LI LI WI D+ + I V
Sbjct: 174 GRPVAFELPPDKF--HSDQSKALLEPKW---KTKNYLISHLIFWIIDQQSSSSIEV 224
>SPAC18G6.01c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 27.1 bits (57), Expect = 1.8
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 1/93 (1%)
Frame = -1
Query: 517 LLSTRQTASDVALRQTASPPARPAWSQVRTSRSFWSTCPSYRSSLMSLTIIL*GANSSLI 338
+ TR A + P WS V T + + T P Y S+T + L+
Sbjct: 1 MFGTRFFAYQFCKNWLSKRPGLVFWSSVATINAMYQTRPLY---CESVTKTIQQTYEGLV 57
Query: 337 QS-INTCISSFTLGSSRDLGSIIALSSFSFKLY 242
Q IN F LGS S +++ + +LY
Sbjct: 58 QKRINNEDELFLLGSGPRYVSFLSIHVYDIELY 90
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 246 SLNENEERAIIEPRSLEDPRV-KELIQVLIDWINDELAPH 362
S N NE +I P SL V ++ I L D++ D APH
Sbjct: 234 SANSNEP-GVIGPNSLSRELVSRQTITTLTDYMTDSKAPH 272
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = -3
Query: 398 IQVFTDVFDDYSVRGQLIVDPIDQYLY 318
+++ +DV DD +V GQ+IV + QY++
Sbjct: 82 VKLASDVPDDKNVTGQMIVKDMLQYIW 108
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 21 IINNKNFEMSSPRPNSPRTP 80
+ N +FE SP PN RTP
Sbjct: 606 VSRNTHFESKSPHPNYSRTP 625
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 4.2
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = -1
Query: 499 TASDVALRQTASPPARPAWSQVRTSRSFWSTCPS-YRSSLMSLTIIL*GANS-SLIQSIN 326
++S + +A+ + + S +S SF S S + +SL+S + ++S SL S +
Sbjct: 44 SSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSS 103
Query: 325 TCISSFTLGSSRDLGSIIALSSFSFKLYSSGGISGAVGLPGESIANLPSA*TSCTSF 155
++S + S S ALSS S L +S S + G+ S+++ S +S +S+
Sbjct: 104 ATLTSSSSASPTSSSSSHALSSSSSSLVAS---SSSSGMSSSSLSHSSSVPSSSSSY 157
>SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 476 SDCVTSGTSSLVSGQNLQELLEYL 405
S C+TS + LV+ Q+ QE+L++L
Sbjct: 68 SGCITSAETVLVNLQSYQEVLKHL 91
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 25.8 bits (54), Expect = 4.2
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = +3
Query: 42 EMSSPRPNSPRTPVLPKKDDKEESFWDXXXXXXXXXXXXEVQDVQAEGKFAIDSPGSPTA 221
E +P P P P +DD+ + D +DVQ E + D+P + A
Sbjct: 17 EQQAPPPQQPAHAAAPAQDDEPDDDIDALIEELFS------EDVQEEQEDNDDAPAAGEA 70
Query: 222 PEIPPE 239
+P E
Sbjct: 71 KAVPEE 76
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 526 PGSLLSTRQTASDVALRQTASPPARPAWSQVRTS 425
P + +T T + + A PP RPA+++ TS
Sbjct: 189 PRTASNTSPTPNSIKSAHPAEPPKRPAFTRSATS 222
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 264 ERAIIEPRSLEDPRVKELIQV--LIDWINDELAPHRIIVKDISED 392
E+AI E E E +++ W+N++ H+I+++ IS++
Sbjct: 419 EKAIEEAAEAERAEADERLRLENFSTWVNEKRETHKILLEKISKN 463
>SPBC4B4.12c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 110
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -3
Query: 446 LVSGQNLQELLEYLSVIQVFTDVFD 372
+VSG N Q+++EY SV++ F+D D
Sbjct: 1 MVSG-NDQQVIEYTSVLKEFSDGVD 24
>SPCC1795.01c |mad3|SPCC895.02|mitotic spindle checkpoint protein
Mad3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 310
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = -1
Query: 355 ANSSLIQSINTCISSFTLGSSRDLGSIIALSSFSFKLYSSGGISGAVGLPG 203
+N++ + + T S + + I+ F F +YS SG G PG
Sbjct: 208 SNTNSVNPLQTTFESTNIQEISQSRTKISKPKFKFSVYSDADGSGKDGQPG 258
>SPBC1604.07 |atp4||F0-ATPase subunit|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 127 ILSQKDSSLSSFLGKTGVLGELGR 56
+++ + ++SFLG GV G LGR
Sbjct: 87 VVNDESIVVASFLGLVGVFGTLGR 110
>SPCC622.14 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 195 IDSPGSPTAPEIPPEEYS 248
IDSP S A PPE+YS
Sbjct: 284 IDSPYSALAASPPPEDYS 301
>SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 24.6 bits (51), Expect = 9.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 194 CKFTLSLNILYFLYALLAT 138
C F LS +I+ LYAL++T
Sbjct: 141 CSFELSADIVGLLYALIST 159
>SPAC1D4.05c |||Erd1 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 387
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 28 ITKISKCLHHALTRQGHLF 84
I I +CLH+ L+R+ H F
Sbjct: 230 IVAILQCLHYGLSRRKHTF 248
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 24.6 bits (51), Expect = 9.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 216 TAPEIPPEEYSLNENEERAI 275
+AP I PEEY+ +E + RA+
Sbjct: 523 SAPYIAPEEYTESEFDPRAV 542
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 355 ANSSLIQSINTCISSFTLGSSRDLGSIIA 269
+ LI++I TCISS G+ L ++A
Sbjct: 155 SEKELIKAIRTCISSKQYGNEDFLSDLVA 183
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 24.6 bits (51), Expect = 9.6
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = -1
Query: 484 ALRQTASPPARPAWSQVRTSRSFWSTCPSYRSSLMSLTIIL*GANSSLIQ 335
AL Q S + + S+ R +RS S SSL S +IL ANS IQ
Sbjct: 709 ALGQPVSSSSSYSHSKGRDTRSSSYVVSSETSSLKSSRLILSHANSVRIQ 758
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 24.6 bits (51), Expect = 9.6
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -1
Query: 418 FWSTCPSYRSSLMSLTIIL*GANSSLIQSINTCISSFTLGSS 293
FWS P + + L + G NS + SS GSS
Sbjct: 201 FWSIRPGHEEQFLKLKLRKPGVNSRPAPPVQDVTSSTKYGSS 242
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,214,799
Number of Sequences: 5004
Number of extensions: 44113
Number of successful extensions: 183
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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