Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_P06
         (547 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    27   0.16 
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    25   0.50 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   8.2  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   8.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   8.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   8.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.2  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 531 QNPVHCSQHDRQLLTLPFVRLRHLR 457
           + P HCS  DRQ + +  +R RHLR
Sbjct: 35  EKPYHCSHCDRQFVQVANLR-RHLR 58


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 171 VQAEGKFAIDSPGSPTAPEIPPE 239
           V  E  F +     PTAP IPPE
Sbjct: 90  VADENGFQVQGSHIPTAPPIPPE 112


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 27  NNKNFEMSSPRPNSPR 74
           NN+   +S PRP  PR
Sbjct: 99  NNRPVYISQPRPPHPR 114



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 27  NNKNFEMSSPRPNSPR 74
           NN+   +S PRP  PR
Sbjct: 155 NNRPVYISQPRPPHPR 170


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
          protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 24 INNKNFEMSSPRPNSP 71
          ++N N  MSS  P SP
Sbjct: 32 LDNSNMSMSSVGPQSP 47


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 454 VPEVTQSDEGQRQKLSVVLRAVNRVLYGT 540
           + E T+SD+ +    SVV  A++R+ Y T
Sbjct: 689 IREQTESDDKEGYLHSVVSGALDRLHYET 717


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
          protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 24 INNKNFEMSSPRPNSP 71
          ++N N  MSS  P SP
Sbjct: 32 LDNSNMSMSSVGPQSP 47


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 80  RCPWRVRAW*RHFE 39
           R PW V  W  HF+
Sbjct: 422 RNPWFVEFWEHHFQ 435


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 207  GSPTAPEIPPEEY 245
            G+P  P I PE+Y
Sbjct: 1177 GAPNVPTILPEQY 1189


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,579
Number of Sequences: 438
Number of extensions: 3045
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)