Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_P05
(528 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111013-1|AAI11014.1| 428|Homo sapiens immunoglobulin superfam... 32 1.1
BC022478-1|AAH22478.1| 428|Homo sapiens immunoglobulin superfam... 32 1.1
AY358871-1|AAQ89230.1| 428|Homo sapiens ISLR protein. 32 1.1
AK223267-1|BAD96987.1| 428|Homo sapiens immunoglobulin superfam... 32 1.1
AB024537-1|BAA85971.1| 428|Homo sapiens ISLR protein. 32 1.1
AB024536-1|BAA85970.1| 428|Homo sapiens ISLR protein. 32 1.1
AB003184-1|BAA22848.1| 428|Homo sapiens ISLR protein. 32 1.1
Z48199-1|CAA88235.1| 288|Homo sapiens syndecan-1 protein. 30 4.4
X60306-1|CAA42851.1| 310|Homo sapiens syndecan protein. 30 4.4
J05392-1|AAA60605.1| 310|Homo sapiens SDC protein. 30 4.4
CR542077-1|CAG46874.1| 326|Homo sapiens PEX10 protein. 30 4.4
BC018198-1|AAH18198.1| 326|Homo sapiens peroxisome biogenesis f... 30 4.4
BC008765-1|AAH08765.1| 310|Homo sapiens syndecan 1 protein. 30 4.4
BC000543-1|AAH00543.1| 346|Homo sapiens peroxisome biogenesis f... 30 4.4
AL513477-1|CAI22603.1| 346|Homo sapiens peroxisome biogenesis f... 30 4.4
AL355593-2|CAI41394.1| 649|Homo sapiens protocadherin 19 protein. 30 4.4
AL355593-1|CAI41393.1| 602|Homo sapiens protocadherin 19 protein. 30 4.4
AJ551176-1|CAD80245.1| 310|Homo sapiens Syndecan-1 protein. 30 4.4
AF060502-1|AAC18133.1| 326|Homo sapiens peroxisome assembly pro... 30 4.4
AC104792-1|AAX93151.1| 310|Homo sapiens unknown protein. 30 4.4
AB037734-1|BAA92551.1| 398|Homo sapiens KIAA1313 protein protein. 30 4.4
AB013818-1|BAA87895.1| 326|Homo sapiens peroxisome biogenesis f... 30 4.4
>BC111013-1|AAI11014.1| 428|Homo sapiens immunoglobulin superfamily
containing leucine-rich repeat protein.
Length = 428
Score = 32.3 bits (70), Expect = 1.1
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -3
Query: 319 ARRDEGVPRGAAVLAPRSGSRWVAHGALHS-AAGYRCRSKVRREIELAYVNIGTFTSKRV 143
A R G+P GA P S W+AH + + AAG + ++L++ I F +
Sbjct: 59 ANRLPGLPEGAFREVPLLQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDL 118
Query: 142 HQNGAL-TLRCAGNQSGEIPTPSNRRM 65
H AL L+ N+ IP + R +
Sbjct: 119 HNLSALQLLKMDSNELTFIPRDAFRSL 145
>BC022478-1|AAH22478.1| 428|Homo sapiens immunoglobulin superfamily
containing leucine-rich repeat protein.
Length = 428
Score = 32.3 bits (70), Expect = 1.1
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -3
Query: 319 ARRDEGVPRGAAVLAPRSGSRWVAHGALHS-AAGYRCRSKVRREIELAYVNIGTFTSKRV 143
A R G+P GA P S W+AH + + AAG + ++L++ I F +
Sbjct: 59 ANRLPGLPEGAFREVPLLQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDL 118
Query: 142 HQNGAL-TLRCAGNQSGEIPTPSNRRM 65
H AL L+ N+ IP + R +
Sbjct: 119 HNLSALQLLKMDSNELTFIPRDAFRSL 145
>AY358871-1|AAQ89230.1| 428|Homo sapiens ISLR protein.
Length = 428
Score = 32.3 bits (70), Expect = 1.1
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -3
Query: 319 ARRDEGVPRGAAVLAPRSGSRWVAHGALHS-AAGYRCRSKVRREIELAYVNIGTFTSKRV 143
A R G+P GA P S W+AH + + AAG + ++L++ I F +
Sbjct: 59 ANRLPGLPEGAFREVPLLQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDL 118
Query: 142 HQNGAL-TLRCAGNQSGEIPTPSNRRM 65
H AL L+ N+ IP + R +
Sbjct: 119 HNLSALQLLKMDSNELTFIPRDAFRSL 145
>AK223267-1|BAD96987.1| 428|Homo sapiens immunoglobulin superfamily
containing leucine-rich repeat variant protein.
Length = 428
Score = 32.3 bits (70), Expect = 1.1
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -3
Query: 319 ARRDEGVPRGAAVLAPRSGSRWVAHGALHS-AAGYRCRSKVRREIELAYVNIGTFTSKRV 143
A R G+P GA P S W+AH + + AAG + ++L++ I F +
Sbjct: 59 ANRLPGLPEGAFREVPLLQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDL 118
Query: 142 HQNGAL-TLRCAGNQSGEIPTPSNRRM 65
H AL L+ N+ IP + R +
Sbjct: 119 HNLSALQLLKMDSNELTFIPRDAFRSL 145
>AB024537-1|BAA85971.1| 428|Homo sapiens ISLR protein.
Length = 428
Score = 32.3 bits (70), Expect = 1.1
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -3
Query: 319 ARRDEGVPRGAAVLAPRSGSRWVAHGALHS-AAGYRCRSKVRREIELAYVNIGTFTSKRV 143
A R G+P GA P S W+AH + + AAG + ++L++ I F +
Sbjct: 59 ANRLPGLPEGAFREVPLLQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDL 118
Query: 142 HQNGAL-TLRCAGNQSGEIPTPSNRRM 65
H AL L+ N+ IP + R +
Sbjct: 119 HNLSALQLLKMDSNELTFIPRDAFRSL 145
>AB024536-1|BAA85970.1| 428|Homo sapiens ISLR protein.
Length = 428
Score = 32.3 bits (70), Expect = 1.1
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -3
Query: 319 ARRDEGVPRGAAVLAPRSGSRWVAHGALHS-AAGYRCRSKVRREIELAYVNIGTFTSKRV 143
A R G+P GA P S W+AH + + AAG + ++L++ I F +
Sbjct: 59 ANRLPGLPEGAFREVPLLQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDL 118
Query: 142 HQNGAL-TLRCAGNQSGEIPTPSNRRM 65
H AL L+ N+ IP + R +
Sbjct: 119 HNLSALQLLKMDSNELTFIPRDAFRSL 145
>AB003184-1|BAA22848.1| 428|Homo sapiens ISLR protein.
Length = 428
Score = 32.3 bits (70), Expect = 1.1
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -3
Query: 319 ARRDEGVPRGAAVLAPRSGSRWVAHGALHS-AAGYRCRSKVRREIELAYVNIGTFTSKRV 143
A R G+P GA P S W+AH + + AAG + ++L++ I F +
Sbjct: 59 ANRLPGLPEGAFREVPLLQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDL 118
Query: 142 HQNGAL-TLRCAGNQSGEIPTPSNRRM 65
H AL L+ N+ IP + R +
Sbjct: 119 HNLSALQLLKMDSNELTFIPRDAFRSL 145
>Z48199-1|CAA88235.1| 288|Homo sapiens syndecan-1 protein.
Length = 288
Score = 30.3 bits (65), Expect = 4.4
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 207 DLHL*PAAEWSAP*ATQRLPERGASTAAPLGTPSSRRAMTYVGRGE 344
DLH P E P AT+R E GAS+ P S + T+ GE
Sbjct: 152 DLHT-PHTEDGGPSATERAAEDGASSQLPAAEGSGEQDFTFETSGE 196
>X60306-1|CAA42851.1| 310|Homo sapiens syndecan protein.
Length = 310
Score = 30.3 bits (65), Expect = 4.4
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 207 DLHL*PAAEWSAP*ATQRLPERGASTAAPLGTPSSRRAMTYVGRGE 344
DLH P E P AT+R E GAS+ P S + T+ GE
Sbjct: 174 DLHT-PHTEDGGPSATERAAEDGASSQLPAAEGSGEQDFTFETSGE 218
>J05392-1|AAA60605.1| 310|Homo sapiens SDC protein.
Length = 310
Score = 30.3 bits (65), Expect = 4.4
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 207 DLHL*PAAEWSAP*ATQRLPERGASTAAPLGTPSSRRAMTYVGRGE 344
DLH P E P AT+R E GAS+ P S + T+ GE
Sbjct: 174 DLHT-PHTEDGGPSATERAAEDGASSQLPAAEGSGEQDFTFETSGE 218
>CR542077-1|CAG46874.1| 326|Homo sapiens PEX10 protein.
Length = 326
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3
Query: 271 RSGSRWVAHGALHSAAGYRCRSKVRREIEL 182
R G R A GALHS AG R + R+E+EL
Sbjct: 22 RGGLRSAAGGALHSLAGARKWLEWRKEVEL 51
>BC018198-1|AAH18198.1| 326|Homo sapiens peroxisome biogenesis
factor 10 protein.
Length = 326
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3
Query: 271 RSGSRWVAHGALHSAAGYRCRSKVRREIEL 182
R G R A GALHS AG R + R+E+EL
Sbjct: 22 RGGLRSAAGGALHSLAGARKWLEWRKEVEL 51
>BC008765-1|AAH08765.1| 310|Homo sapiens syndecan 1 protein.
Length = 310
Score = 30.3 bits (65), Expect = 4.4
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 207 DLHL*PAAEWSAP*ATQRLPERGASTAAPLGTPSSRRAMTYVGRGE 344
DLH P E P AT+R E GAS+ P S + T+ GE
Sbjct: 174 DLHT-PHTEDGGPSATERAAEDGASSQLPAAEGSGEQDFTFETSGE 218
>BC000543-1|AAH00543.1| 346|Homo sapiens peroxisome biogenesis
factor 10 protein.
Length = 346
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3
Query: 271 RSGSRWVAHGALHSAAGYRCRSKVRREIEL 182
R G R A GALHS AG R + R+E+EL
Sbjct: 22 RGGLRSAAGGALHSLAGARKWLEWRKEVEL 51
>AL513477-1|CAI22603.1| 346|Homo sapiens peroxisome biogenesis
factor 10 protein.
Length = 346
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3
Query: 271 RSGSRWVAHGALHSAAGYRCRSKVRREIEL 182
R G R A GALHS AG R + R+E+EL
Sbjct: 22 RGGLRSAAGGALHSLAGARKWLEWRKEVEL 51
>AL355593-2|CAI41394.1| 649|Homo sapiens protocadherin 19 protein.
Length = 649
Score = 30.3 bits (65), Expect = 4.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 187 RSRDELSIYTCSPRPSGVLREQPNGCQSEARAQPPL 294
+ + + + CSP+ + V+RE NGC++ + PL
Sbjct: 535 KGKRTVDVTICSPKVNSVIREAGNGCEAISPVTSPL 570
>AL355593-1|CAI41393.1| 602|Homo sapiens protocadherin 19 protein.
Length = 602
Score = 30.3 bits (65), Expect = 4.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 187 RSRDELSIYTCSPRPSGVLREQPNGCQSEARAQPPL 294
+ + + + CSP+ + V+RE NGC++ + PL
Sbjct: 488 KGKRTVDVTICSPKVNSVIREAGNGCEAISPVTSPL 523
>AJ551176-1|CAD80245.1| 310|Homo sapiens Syndecan-1 protein.
Length = 310
Score = 30.3 bits (65), Expect = 4.4
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 207 DLHL*PAAEWSAP*ATQRLPERGASTAAPLGTPSSRRAMTYVGRGE 344
DLH P E P AT+R E GAS+ P S + T+ GE
Sbjct: 174 DLHT-PHTEDGGPSATERAAEDGASSQLPAAEGSGEQDFTFETSGE 218
>AF060502-1|AAC18133.1| 326|Homo sapiens peroxisome assembly
protein PEX10 protein.
Length = 326
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3
Query: 271 RSGSRWVAHGALHSAAGYRCRSKVRREIEL 182
R G R A GALHS AG R + R+E+EL
Sbjct: 22 RGGLRSAAGGALHSLAGARKWLEWRKEVEL 51
>AC104792-1|AAX93151.1| 310|Homo sapiens unknown protein.
Length = 310
Score = 30.3 bits (65), Expect = 4.4
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 207 DLHL*PAAEWSAP*ATQRLPERGASTAAPLGTPSSRRAMTYVGRGE 344
DLH P E P AT+R E GAS+ P S + T+ GE
Sbjct: 174 DLHT-PHTEDGGPSATERAAEDGASSQLPAAEGSGEQDFTFETSGE 218
>AB037734-1|BAA92551.1| 398|Homo sapiens KIAA1313 protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 4.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 187 RSRDELSIYTCSPRPSGVLREQPNGCQSEARAQPPL 294
+ + + + CSP+ + V+RE NGC++ + PL
Sbjct: 284 KGKRTVDVTICSPKVNSVIREAGNGCEAISPVTSPL 319
>AB013818-1|BAA87895.1| 326|Homo sapiens peroxisome biogenesis
factor (peroxin) 10 protein.
Length = 326
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3
Query: 271 RSGSRWVAHGALHSAAGYRCRSKVRREIEL 182
R G R A GALHS AG R + R+E+EL
Sbjct: 22 RGGLRSAAGGALHSLAGARKWLEWRKEVEL 51
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,005,159
Number of Sequences: 237096
Number of extensions: 1551204
Number of successful extensions: 5128
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5125
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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