Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_P04
         (557 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin ...   134   3e-32
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...   121   3e-28
AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical...    49   3e-06
U80444-3|AAB37789.1|  326|Caenorhabditis elegans Serpentine rece...    29   1.7  
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AL132948-35|CAC51060.2|  887|Caenorhabditis elegans Hypothetical...    28   5.2  
Z71266-7|CAA95845.1|  987|Caenorhabditis elegans Hypothetical pr...    27   6.9  

>U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin
           protein 2 protein.
          Length = 195

 Score =  134 bits (325), Expect = 3e-32
 Identities = 59/88 (67%), Positives = 73/88 (82%)
 Frame = +1

Query: 292 TKAMISKPAPEWEATAVLNGEFTQLSLSSFKGKYLVFFFYPLDFTFVCPTEILAFSERIE 471
           +KA I KPAP+++  AV++GEF  +SLS +KGKY+V FFYPLDFTFVCPTEI+AFS+R E
Sbjct: 2   SKAFIGKPAPQFKTQAVVDGEFVDVSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAE 61

Query: 472 EFRKINTEVVACSVDSHFTHLAWINTPR 555
           EF+ INT V+A S DS F+HLAWIN PR
Sbjct: 62  EFKAINTVVLAASTDSVFSHLAWINQPR 89


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score =  121 bits (292), Expect = 3e-28
 Identities = 50/79 (63%), Positives = 64/79 (81%)
 Frame = +1

Query: 319 PEWEATAVLNGEFTQLSLSSFKGKYLVFFFYPLDFTFVCPTEILAFSERIEEFRKINTEV 498
           P ++ TAV++G+F  +S   +KGK+LV FFYPLDFTFVCPTEI+A+ +R  EFR +  EV
Sbjct: 40  PAFKGTAVVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEIIAYGDRANEFRSLGAEV 99

Query: 499 VACSVDSHFTHLAWINTPR 555
           VACS DSHF+HLAW+NTPR
Sbjct: 100 VACSCDSHFSHLAWVNTPR 118


>AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.11 protein.
          Length = 231

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = +1

Query: 388 KYLVFFFYPLDFTFVCPTEILAFSERIEEFRKINTEVVACSVDSHFTHLAW 540
           ++L+ F +P DFT VC TE+    +   EFRK + +++A S+DS  TH  W
Sbjct: 29  QWLMLFSHPADFTPVCTTELAELVKLAPEFRKRHVQILAISIDSSETHRDW 79


>U80444-3|AAB37789.1|  326|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 14 protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +1

Query: 355 FTQLSLSSFKGKYLVFFFYPLDFTFVCPT-EILAFSERIEEFRK-INTEVVACSVDSHF 525
           F ++S +S     LVF    L FTF+C    +L   ER +E  K I+   V  S+   F
Sbjct: 193 FKKVSWASQSRFQLVFIIIALSFTFICTAITLLKLPERSKEIEKAISNATVIISIGFTF 251


>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical
           protein K04D7.4 protein.
          Length = 1159

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = -1

Query: 515 STEHATTSVFIFLNSSILSENAKISVGQTNVKSKG*KKNTKYFPLKLDSDNCVNSPFSTA 336
           +T+    S F    S I  E + I V  TN+   G +K  +Y+P + DS     +   T 
Sbjct: 716 ATQAPLPSTFSDFWSMIWQERSNIIVCITNMVEDGKRKCDQYWPSQQDSPQTFGNYQVTL 775

Query: 335 VASHSGAGF 309
           V+  + A F
Sbjct: 776 VSESTNAHF 784


>AL132948-35|CAC51060.2|  887|Caenorhabditis elegans Hypothetical
           protein Y39B6A.47 protein.
          Length = 887

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +2

Query: 368 HYPVLKENIWYSFSILWISHLSALPKF*HFRKE---LKNLER*IQKWWH 505
           ++ V K   WYS +   I HL    KF  +RK    L+  ER    W H
Sbjct: 197 NFRVKKYATWYSHATYLIEHLPMNQKFETYRKSWNLLRMFERIAMTWKH 245


>Z71266-7|CAA95845.1|  987|Caenorhabditis elegans Hypothetical
           protein R06C7.8 protein.
          Length = 987

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -1

Query: 374 DSDNCVNSPFSTAVA--SHSGAGFDIMALVNC 285
           D    ++S +STA A  S SGAG D+MA   C
Sbjct: 366 DRSTSISSNYSTASARTSKSGAGLDLMAENKC 397


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,897,115
Number of Sequences: 27780
Number of extensions: 232131
Number of successful extensions: 491
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)