Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_P01
         (509 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    59   2e-09
U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    55   3e-08
AC025716-15|AAO21409.1|  521|Caenorhabditis elegans Udp-glucuron...    28   3.4  
AF125459-7|AAD12836.1|  971|Caenorhabditis elegans Hypothetical ...    28   4.5  
Z75712-1|CAB00040.1|  724|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U42848-5|AAN84855.1|  283|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U42848-4|AAA83610.2|  302|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AC087081-2|AAK66036.1|  336|Caenorhabditis elegans Hypothetical ...    27   7.9  

>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 58.8 bits (136), Expect = 2e-09
 Identities = 29/55 (52%), Positives = 38/55 (69%)
 Frame = +2

Query: 107 VLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 271
           VLGG A+P   D++ ILS+VG++AD+E  K V+S L GK VEELI  G   L S+
Sbjct: 11  VLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSAGLVSV 65


>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 54.8 bits (126), Expect = 3e-08
 Identities = 25/54 (46%), Positives = 35/54 (64%)
 Frame = +2

Query: 110 LGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 271
           LGG ASP+A DV K+L + G++ D E    V+  L GK + E+I  G+ KLSS+
Sbjct: 12  LGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSV 65


>AC025716-15|AAO21409.1|  521|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein31 protein.
          Length = 521

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 490 SCYSYNINWNKTTSAASTPTLFIMKLVKKTEAHVVV 383
           +C+ + I   +TT A  T    I K + KTE HV +
Sbjct: 107 TCFEFFIQMMQTTCAEFTSNREIFKKLSKTEFHVAI 142


>AF125459-7|AAD12836.1|  971|Caenorhabditis elegans Hypothetical
           protein Y25C1A.5 protein.
          Length = 971

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 10/34 (29%), Positives = 22/34 (64%)
 Frame = +2

Query: 140 DVEKILSSVGIEADSEKLKKVISELNGKNVEELI 241
           D+ ++LSS G+E   + L   +  ++ +NVE+++
Sbjct: 325 DILRVLSSPGLEVRKKTLSLALDLVSSRNVEDMV 358


>Z75712-1|CAB00040.1|  724|Caenorhabditis elegans Hypothetical
           protein K04G2.3 protein.
          Length = 724

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +2

Query: 143 VEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 271
           +E  +S++GI+ D ++  KV+S   G  ++ L  +  G  S +
Sbjct: 195 IESKMSAMGIDDDKKRNSKVVSTAVGYKIQILNASAEGSTSDV 237


>U42848-5|AAN84855.1|  283|Caenorhabditis elegans Hypothetical
           protein C31H1.6b protein.
          Length = 283

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 481 SYNINWNKTTSAASTPTLFIM 419
           SYNINW K     S PT  I+
Sbjct: 56  SYNINWTKLFQECSEPTYTIL 76


>U42848-4|AAA83610.2|  302|Caenorhabditis elegans Hypothetical
           protein C31H1.6a protein.
          Length = 302

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 481 SYNINWNKTTSAASTPTLFIM 419
           SYNINW K     S PT  I+
Sbjct: 75  SYNINWTKLFQECSEPTYTIL 95


>AC087081-2|AAK66036.1|  336|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.12 protein.
          Length = 336

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +2

Query: 77  VTWRVLPXXPVLGGKASPAAADVEKILSSVGIEADS---EKLKKVISELNGKNVEELIEA 247
           V W +LP    L G     +   E I+ ++GI  D+   EKL + +        + +IE 
Sbjct: 122 VKWAILPTCESLWGYGMGKSTKEENIMVTLGIGHDTMAEEKLNRTLPNTKFFGADPIIEP 181

Query: 248 GR 253
            R
Sbjct: 182 NR 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,027,022
Number of Sequences: 27780
Number of extensions: 137189
Number of successful extensions: 418
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)