Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_O22
(603 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein pr... 55 2e-07
BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha f... 55 2e-07
BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-indu... 55 2e-07
BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha f... 55 2e-07
BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-indu... 55 2e-07
BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-indu... 55 2e-07
BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-indu... 55 2e-07
BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-indu... 55 2e-07
BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-indu... 55 2e-07
BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-indu... 55 2e-07
BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-indu... 55 2e-07
BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein. 55 2e-07
AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane... 55 2e-07
DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing pro... 36 0.083
CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein. 36 0.083
BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for IM... 36 0.083
BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open read... 36 0.083
AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I... 36 0.083
AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open read... 32 1.4
BC101162-1|AAI01163.1| 201|Homo sapiens keratin associated prot... 30 7.2
BC101160-1|AAI01161.1| 201|Homo sapiens keratin associated prot... 30 7.2
BC101159-1|AAI01160.1| 201|Homo sapiens keratin associated prot... 30 7.2
BC004212-1|AAH04212.1| 201|Homo sapiens keratin associated prot... 30 7.2
BC004180-1|AAH04180.1| 201|Homo sapiens keratin associated prot... 30 7.2
AJ406943-1|CAC27582.1| 201|Homo sapiens keratin associated prot... 30 7.2
BC132862-1|AAI32863.1| 1316|Homo sapiens ubiquitin specific pept... 29 9.5
BC060846-1|AAH60846.2| 1202|Homo sapiens USP42 protein protein. 29 9.5
AY618868-1|AAT67238.1| 1324|Homo sapiens ubiquitin specific prot... 29 9.5
AK022759-1|BAB14232.1| 1198|Homo sapiens protein ( Homo sapiens ... 29 9.5
AK001208-1|BAA91554.1| 263|Homo sapiens protein ( Homo sapiens ... 29 9.5
AJ601395-1|CAE53097.1| 1325|Homo sapiens ubiquitin-specific prot... 29 9.5
>BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein
protein.
Length = 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCMRSCKTANHYCPQCKAFLGSY 350
NK +V+++ Y T + +LC++ C GC F P+C+ + + +HYCP C+A LG+Y
Sbjct: 100 NKMIVSQLSYNAGALTWLSCGSLCLLG-CIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCMRSCKTANHYCPQCKAFLGSY 350
NK +V+++ Y T + +LC++ C GC F P+C+ + + +HYCP C+A LG+Y
Sbjct: 100 NKMIVSQLSYNAGALTWLSCGSLCLLG-CIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCMRSCKTANHYCPQCKAFLGSY 350
NK +V+++ Y T + +LC++ C GC F P+C+ + + +HYCP C+A LG+Y
Sbjct: 100 NKMIVSQLSYNAGALTWLSCGSLCLLG-CIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCMRSCKTANHYCPQCKAFLGSY 350
NK +V+++ Y T + +LC++ C GC F P+C+ + + +HYCP C+A LG+Y
Sbjct: 100 NKMIVSQLSYNAGALTWLSCGSLCLLG-CIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCMRSCKTANHYCPQCKAFLGSY 350
NK +V+++ Y T + +LC++ C GC F P+C+ + + +HYCP C+A LG+Y
Sbjct: 100 NKMIVSQLSYNAGALTWLSCGSLCLLG-CIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCMRSCKTANHYCPQCKAFLGSY 350
NK +V+++ Y T + +LC++ C GC F P+C+ + + +HYCP C+A LG+Y
Sbjct: 100 NKMIVSQLSYNAGALTWLSCGSLCLLG-CIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCMRSCKTANHYCPQCKAFLGSY 350
NK +V+++ Y T + +LC++ C GC F P+C+ + + +HYCP C+A LG+Y
Sbjct: 100 NKMIVSQLSYNAGALTWLSCGSLCLLG-CIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCMRSCKTANHYCPQCKAFLGSY 350
NK +V+++ Y T + +LC++ C GC F P+C+ + + +HYCP C+A LG+Y
Sbjct: 100 NKMIVSQLSYNAGALTWLSCGSLCLLG-CIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCMRSCKTANHYCPQCKAFLGSY 350
NK +V+++ Y T + +LC++ C GC F P+C+ + + +HYCP C+A LG+Y
Sbjct: 100 NKMIVSQLSYNAGALTWLSCGSLCLLG-CIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCMRSCKTANHYCPQCKAFLGSY 350
NK +V+++ Y T + +LC++ C GC F P+C+ + + +HYCP C+A LG+Y
Sbjct: 100 NKMIVSQLSYNAGALTWLSCGSLCLLG-CIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCMRSCKTANHYCPQCKAFLGSY 350
NK +V+++ Y T + +LC++ C GC F P+C+ + + +HYCP C+A LG+Y
Sbjct: 100 NKMIVSQLSYNAGALTWLSCGSLCLLG-CIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein.
Length = 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCMRSCKTANHYCPQCKAFLGSY 350
NK +V+++ Y T + +LC++ C GC F P+C+ + + +HYCP C+A LG+Y
Sbjct: 100 NKMIVSQLSYNAGALTWLSCGSLCLLG-CIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane
protein of lysosome/late endosome protein.
Length = 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCMRSCKTANHYCPQCKAFLGSY 350
NK +V+++ Y T + +LC++ C GC F P+C+ + + +HYCP C+A LG+Y
Sbjct: 100 NKMIVSQLSYNAGALTWLSCGSLCLLG-CIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing
protein protein.
Length = 208
Score = 36.3 bits (80), Expect = 0.083
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 177 KTVVTRVDYVPNNRTHIISAALCVISSCCCGC-LFPYCMRSCKTANHYCPQCKAFLGSY 350
+ + T++ Y ++ C C GC L P + K H CP CKA++ +Y
Sbjct: 147 QAITTKISYEIGLMNFVLGF-FCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTY 204
>CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein.
Length = 208
Score = 36.3 bits (80), Expect = 0.083
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 177 KTVVTRVDYVPNNRTHIISAALCVISSCCCGC-LFPYCMRSCKTANHYCPQCKAFLGSY 350
+ + T++ Y ++ C C GC L P + K H CP CKA++ +Y
Sbjct: 147 QAIATKISYEIGLMNFVLGF-FCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTY 204
>BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for
IMAGE:3350242) protein.
Length = 125
Score = 36.3 bits (80), Expect = 0.083
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 177 KTVVTRVDYVPNNRTHIISAALCVISSCCCGC-LFPYCMRSCKTANHYCPQCKAFLGSY 350
+ + T++ Y ++ C C GC L P + K H CP CKA++ +Y
Sbjct: 64 QAITTKISYEIGLMNFVLGF-FCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTY 121
>BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 208
Score = 36.3 bits (80), Expect = 0.083
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 177 KTVVTRVDYVPNNRTHIISAALCVISSCCCGC-LFPYCMRSCKTANHYCPQCKAFLGSY 350
+ + T++ Y ++ C C GC L P + K H CP CKA++ +Y
Sbjct: 147 QAITTKISYEIGLMNFVLGF-FCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTY 204
>AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I1
protein.
Length = 208
Score = 36.3 bits (80), Expect = 0.083
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 177 KTVVTRVDYVPNNRTHIISAALCVISSCCCGC-LFPYCMRSCKTANHYCPQCKAFLGSY 350
+ + T++ Y ++ C C GC L P + K H CP CKA++ +Y
Sbjct: 147 QAITTKISYEIGLMNFVLGF-FCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTY 204
>AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 261
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +3
Query: 177 KTVVTRVDYVPNNRTHIISAALCVISSCCCGC-LFPYCMRSCKTANHYCPQCKA 335
+ + T++ Y ++ C C GC L P + K H CP CKA
Sbjct: 147 QAITTKISYEIGLMNFVLGF-FCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKA 199
>BC101162-1|AAI01163.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 29.9 bits (64), Expect = 7.2
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +3
Query: 243 CVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSYTPS 359
C+ SSCC C C R C C + Y P+
Sbjct: 146 CISSSCCPSCCESSCCRPCCCLRPVCGRVSCHTTCYRPT 184
>BC101160-1|AAI01161.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 29.9 bits (64), Expect = 7.2
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +3
Query: 243 CVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSYTPS 359
C+ SSCC C C R C C + Y P+
Sbjct: 146 CISSSCCPSCCESSCCRPCCCLRPVCGRVSCHTTCYRPT 184
>BC101159-1|AAI01160.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 29.9 bits (64), Expect = 7.2
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +3
Query: 243 CVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSYTPS 359
C+ SSCC C C R C C + Y P+
Sbjct: 146 CISSSCCPSCCESSCCRPCCCLRPVCGRVSCHTTCYRPT 184
>BC004212-1|AAH04212.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 29.9 bits (64), Expect = 7.2
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +3
Query: 243 CVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSYTPS 359
C+ SSCC C C R C C + Y P+
Sbjct: 146 CISSSCCPSCCESSCCRPCCCLRPVCGRVSCHTTCYRPT 184
>BC004180-1|AAH04180.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 29.9 bits (64), Expect = 7.2
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +3
Query: 243 CVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSYTPS 359
C+ SSCC C C R C C + Y P+
Sbjct: 146 CISSSCCPSCCESSCCRPCCCLRPVCGRVSCHTTCYRPT 184
>AJ406943-1|CAC27582.1| 201|Homo sapiens keratin associated protein
4.12 protein.
Length = 201
Score = 29.9 bits (64), Expect = 7.2
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +3
Query: 243 CVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSYTPS 359
C+ SSCC C C R C C + Y P+
Sbjct: 146 CISSSCCPSCCESSCCRPCCCLRPVCGRVSCHTTCYRPT 184
>BC132862-1|AAI32863.1| 1316|Homo sapiens ubiquitin specific peptidase
42 protein.
Length = 1316
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 82 RERQSSHPEQQHPGHRESYVP-DRRAL-RVKH 171
R+RQ H + HPGH + P +RR+L R H
Sbjct: 988 RDRQDRHAPEHHPGHGDRLSPGERRSLGRCSH 1019
>BC060846-1|AAH60846.2| 1202|Homo sapiens USP42 protein protein.
Length = 1202
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 82 RERQSSHPEQQHPGHRESYVP-DRRAL-RVKH 171
R+RQ H + HPGH + P +RR+L R H
Sbjct: 988 RDRQDRHAPEHHPGHGDRLSPGERRSLGRCSH 1019
>AY618868-1|AAT67238.1| 1324|Homo sapiens ubiquitin specific protease
42 protein.
Length = 1324
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 82 RERQSSHPEQQHPGHRESYVP-DRRAL-RVKH 171
R+RQ H + HPGH + P +RR+L R H
Sbjct: 988 RDRQDRHAPEHHPGHGDRLSPGERRSLGRCSH 1019
>AK022759-1|BAB14232.1| 1198|Homo sapiens protein ( Homo sapiens cDNA
FLJ12697 fis, clone NT2RP1000522, weakly similar to
UBIQUITIN CARBOXYL-TERMINAL HYDROLASE DUB-1 (EC
3.1.2.15). ).
Length = 1198
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 82 RERQSSHPEQQHPGHRESYVP-DRRAL-RVKH 171
R+RQ H + HPGH + P +RR+L R H
Sbjct: 988 RDRQDRHAPEHHPGHGDRLSPGERRSLGRCSH 1019
>AK001208-1|BAA91554.1| 263|Homo sapiens protein ( Homo sapiens
cDNA FLJ10346 fis, clone NT2RM2001004. ).
Length = 263
Score = 29.5 bits (63), Expect = 9.5
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +1
Query: 52 PVW*SLQTLHRERQSSHPEQQHPGHRESYVPDRRALRVKHATKLLSPEWITYR 210
PVW L + R+ S P+Q HP H P LR + KL + YR
Sbjct: 76 PVWLCLSPVPRQLGGSIPKQMHPAH--DGTPGTPILRTLQSFKLELAGFCLYR 126
>AJ601395-1|CAE53097.1| 1325|Homo sapiens ubiquitin-specific protease
42 protein.
Length = 1325
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 82 RERQSSHPEQQHPGHRESYVP-DRRAL-RVKH 171
R+RQ H + HPGH + P +RR+L R H
Sbjct: 988 RDRQDRHAPEHHPGHGDRLSPGERRSLGRCSH 1019
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,584,488
Number of Sequences: 237096
Number of extensions: 1679380
Number of successful extensions: 3659
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 3451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3641
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -