SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_O22
         (603 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3442|ABC66040.1|  168|Drosophila melanogaster CG13516-P...    89   6e-18
AE013599-3441|AAF46883.2|  144|Drosophila melanogaster CG30269-P...    73   4e-13
AE013599-3440|AAM71112.1|  128|Drosophila melanogaster CG30273-P...    72   7e-13
AE013599-3436|AAF46879.2|  129|Drosophila melanogaster CG13510-P...    68   1e-11
AY113600-1|AAM29605.1|  121|Drosophila melanogaster RH52355p pro...    64   1e-10
AY071678-1|AAL49300.1|  121|Drosophila melanogaster RH06571p pro...    64   1e-10
AE013599-3439|AAF46882.1|  121|Drosophila melanogaster CG4250-PA...    64   1e-10
AE013599-3437|AAF46880.1|  122|Drosophila melanogaster CG13511-P...    48   7e-06
BT022713-1|AAY55129.1|  135|Drosophila melanogaster RE62510p pro...    47   2e-05
AE013599-3438|AAF46881.2|  135|Drosophila melanogaster CG13512-P...    47   2e-05
AY060947-1|AAL28495.1|   67|Drosophila melanogaster GM08588p pro...    44   2e-04
AE014296-579|AAN11537.1|  130|Drosophila melanogaster CG32280-PC...    44   2e-04
AE014296-578|AAN11536.1|  130|Drosophila melanogaster CG32280-PB...    44   2e-04
AE014296-577|AAN11535.1|  130|Drosophila melanogaster CG32280-PA...    44   2e-04
AE013599-3615|AAF47016.1|  114|Drosophila melanogaster CG13559-P...    33   0.30 
AE013599-3433|AAF46878.2|  147|Drosophila melanogaster CG30196-P...    32   0.69 
BT022289-1|AAY54705.1|  134|Drosophila melanogaster IP04672p pro...    31   1.2  
AY089394-1|AAL90132.1|  250|Drosophila melanogaster AT21920p pro...    31   1.6  
AE013599-2228|AAF58034.2|  250|Drosophila melanogaster CG15708-P...    31   1.6  
X87141-1|CAA60619.1|  722|Drosophila melanogaster VND (ventral n...    29   4.9  
AL031883-2|CAA21410.1|  723|Drosophila melanogaster EG:118B3.1,F...    29   4.9  
AE014298-61|AAF45521.1|  723|Drosophila melanogaster CG6172-PA, ...    29   4.9  
AE014298-60|ABI30961.1|  577|Drosophila melanogaster CG6172-PB, ...    29   4.9  
AE014296-3097|AAF49199.1|  530|Drosophila melanogaster CG18136-P...    29   4.9  
BT021316-1|AAX33464.1|  916|Drosophila melanogaster RE12330p pro...    28   8.5  
AY113356-1|AAM29361.1|  347|Drosophila melanogaster GM13546p pro...    28   8.5  
AF227213-2|AAF43020.1|  912|Drosophila melanogaster Tara 1B isof...    28   8.5  
AF227213-1|AAF43019.1|  916|Drosophila melanogaster Tara 1A isof...    28   8.5  
AF227212-1|AAF43018.1|  912|Drosophila melanogaster Tara 1B isof...    28   8.5  
AF227211-1|AAF43017.1|  916|Drosophila melanogaster Tara 1A isof...    28   8.5  
AE014297-2169|AAN13701.1|  912|Drosophila melanogaster CG6889-PB...    28   8.5  
AE014297-2168|AAF55288.2|  916|Drosophila melanogaster CG6889-PA...    28   8.5  
AE013599-3824|AAF47170.1|  347|Drosophila melanogaster CG3260-PA...    28   8.5  

>AE013599-3442|ABC66040.1|  168|Drosophila melanogaster CG13516-PA
           protein.
          Length = 168

 Score = 88.6 bits (210), Expect = 6e-18
 Identities = 32/61 (52%), Positives = 43/61 (70%)
 Frame = +3

Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSYT 353
           NKT  TR+ +  N+RTH+++  LC++  CCC C  PYCM SC+T NHYC +C  FLG+Y 
Sbjct: 105 NKT--TRMTHTANSRTHMVAGLLCLVGFCCCACFVPYCMNSCRTGNHYCRKCNTFLGAYN 162

Query: 354 P 356
           P
Sbjct: 163 P 163


>AE013599-3441|AAF46883.2|  144|Drosophila melanogaster CG30269-PA
           protein.
          Length = 144

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 28/54 (51%), Positives = 36/54 (66%)
 Frame = +3

Query: 189 TRVDYVPNNRTHIISAALCVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSY 350
           TRV + PN+RTH+I+  LC+    CC CL PYC+ SC   NHYC  C  +LG+Y
Sbjct: 89  TRVSFKPNSRTHLIALILCLFQLYCCVCL-PYCISSCMNTNHYCGMCDRYLGTY 141


>AE013599-3440|AAM71112.1|  128|Drosophila melanogaster CG30273-PA
           protein.
          Length = 128

 Score = 71.7 bits (168), Expect = 7e-13
 Identities = 27/55 (49%), Positives = 37/55 (67%)
 Frame = +3

Query: 186 VTRVDYVPNNRTHIISAALCVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSY 350
           +TRV+Y P+ +TH ++A LC++   CC CL PYC  SC  ANH+C  C  F+G Y
Sbjct: 72  LTRVEYSPSVKTHCMAAILCIVGLWCCACL-PYCATSCMNANHFCGNCNKFVGVY 125


>AE013599-3436|AAF46879.2|  129|Drosophila melanogaster CG13510-PA
           protein.
          Length = 129

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 28/56 (50%), Positives = 36/56 (64%)
 Frame = +3

Query: 183 VVTRVDYVPNNRTHIISAALCVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSY 350
           V+T V   P+ RTH  +  LC+     C CL PYCM SC+ ANHYCP C A++G+Y
Sbjct: 73  VLTTVKSTPSGRTHCWALILCLFICWPCVCL-PYCMDSCQNANHYCPNCSAYIGTY 127


>AY113600-1|AAM29605.1|  121|Drosophila melanogaster RH52355p
           protein.
          Length = 121

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 21/54 (38%), Positives = 38/54 (70%)
 Frame = +3

Query: 189 TRVDYVPNNRTHIISAALCVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSY 350
           T+V++ P+ +TH+++  +C++   CC C+ PYC  SC++A H C  C A++G+Y
Sbjct: 67  TKVEFEPSTKTHLLALLICMLGGICCCCI-PYCTDSCQSAKHTCTSCGAYVGTY 119


>AY071678-1|AAL49300.1|  121|Drosophila melanogaster RH06571p
           protein.
          Length = 121

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 21/54 (38%), Positives = 38/54 (70%)
 Frame = +3

Query: 189 TRVDYVPNNRTHIISAALCVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSY 350
           T+V++ P+ +TH+++  +C++   CC C+ PYC  SC++A H C  C A++G+Y
Sbjct: 67  TKVEFEPSTKTHLLALLICMLGGICCCCI-PYCTDSCQSAKHTCTSCGAYVGTY 119


>AE013599-3439|AAF46882.1|  121|Drosophila melanogaster CG4250-PA
           protein.
          Length = 121

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 21/54 (38%), Positives = 38/54 (70%)
 Frame = +3

Query: 189 TRVDYVPNNRTHIISAALCVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSY 350
           T+V++ P+ +TH+++  +C++   CC C+ PYC  SC++A H C  C A++G+Y
Sbjct: 67  TKVEFEPSTKTHLLALLICMLGGICCCCI-PYCTDSCQSAKHTCTSCGAYVGTY 119


>AE013599-3437|AAF46880.1|  122|Drosophila melanogaster CG13511-PA
           protein.
          Length = 122

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +3

Query: 183 VVTRVDYVPNNRTHIISAALCVISSCCCG---CLFPYCMRSCKTANHYCPQCKAFLGSYT 353
           V T +   P  +TH+ +  L +   CCC    CL PY +  CK+  HYCP C   +GSY+
Sbjct: 66  VTTSLATSPTRKTHMCALTLYI---CCCWPFICL-PYFINYCKSVQHYCPNCGCHIGSYS 121


>BT022713-1|AAY55129.1|  135|Drosophila melanogaster RE62510p
           protein.
          Length = 135

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +3

Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSY 350
           N  +  RV++ P   T+ ++A LC+     C C  P C   C   + YCP C + LGS+
Sbjct: 78  NARIRLRVEHHPTGSTYCMAALLCLFLCWPCVCA-PCCCNCCYKTSQYCPNCNSCLGSF 135


>AE013599-3438|AAF46881.2|  135|Drosophila melanogaster CG13512-PA
           protein.
          Length = 135

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +3

Query: 174 NKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSY 350
           N  +  RV++ P   T+ ++A LC+     C C  P C   C   + YCP C + LGS+
Sbjct: 78  NARIRLRVEHHPTGSTYCMAALLCLFLCWPCVCA-PCCCNCCYKTSQYCPNCNSCLGSF 135


>AY060947-1|AAL28495.1|   67|Drosophila melanogaster GM08588p
           protein.
          Length = 67

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 228 ISAALCVISSCCCGC-LFPYCMRSCKTANHYCPQCKAFLGSY 350
           +S  L  +  C  GC L P C+  C   +H CP C+A+LG Y
Sbjct: 24  LSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRY 65


>AE014296-579|AAN11537.1|  130|Drosophila melanogaster CG32280-PC,
           isoform C protein.
          Length = 130

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 228 ISAALCVISSCCCGC-LFPYCMRSCKTANHYCPQCKAFLGSY 350
           +S  L  +  C  GC L P C+  C   +H CP C+A+LG Y
Sbjct: 87  LSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRY 128


>AE014296-578|AAN11536.1|  130|Drosophila melanogaster CG32280-PB,
           isoform B protein.
          Length = 130

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 228 ISAALCVISSCCCGC-LFPYCMRSCKTANHYCPQCKAFLGSY 350
           +S  L  +  C  GC L P C+  C   +H CP C+A+LG Y
Sbjct: 87  LSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRY 128


>AE014296-577|AAN11535.1|  130|Drosophila melanogaster CG32280-PA,
           isoform A protein.
          Length = 130

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 228 ISAALCVISSCCCGC-LFPYCMRSCKTANHYCPQCKAFLGSY 350
           +S  L  +  C  GC L P C+  C   +H CP C+A+LG Y
Sbjct: 87  LSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRY 128


>AE013599-3615|AAF47016.1|  114|Drosophila melanogaster CG13559-PA
           protein.
          Length = 114

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 228 ISAALCVISSCCCGCLFPYCMRSC-KTANHYCPQCKAFLG 344
           +++ + + ++C  GC    C+  C    +H CP CKA LG
Sbjct: 64  VASGIVLFTTCGIGCWLIPCILDCFNEIHHSCPVCKATLG 103


>AE013599-3433|AAF46878.2|  147|Drosophila melanogaster CG30196-PA
           protein.
          Length = 147

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
 Frame = +3

Query: 219 THIISAALCVISSCCCG-----CLFPYCMRSCKTANHYCPQCKAFLG 344
           TH+ S A+ V+    C      C  P   +     NHYC  C  F+G
Sbjct: 43  THVKSEAVTVLQKIACSLNVLLCCNPIRWKGRHDVNHYCSSCGCFIG 89


>BT022289-1|AAY54705.1|  134|Drosophila melanogaster IP04672p
           protein.
          Length = 134

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 243 CVISSCCCGCLFPYCMRSCKT-ANHYCPQCKAFLG 344
           C+  + CC C F Y +   +T  +HYC  C  + G
Sbjct: 84  CLFVTFCCCCCFNYYVPCKQTDRSHYCGNCGCYFG 118


>AY089394-1|AAL90132.1|  250|Drosophila melanogaster AT21920p
           protein.
          Length = 250

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
 Frame = +3

Query: 219 THIISAALCV--ISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSY 350
           T I +   C   + SC   C  P  M +      YC  C+AFLG Y
Sbjct: 174 TEISNNGCCAAWVVSCWPLCFLPCLMSADNNEYLYCANCRAFLGIY 219


>AE013599-2228|AAF58034.2|  250|Drosophila melanogaster CG15708-PA
           protein.
          Length = 250

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
 Frame = +3

Query: 219 THIISAALCV--ISSCCCGCLFPYCMRSCKTANHYCPQCKAFLGSY 350
           T I +   C   + SC   C  P  M +      YC  C+AFLG Y
Sbjct: 174 TEISNNGCCAAWVVSCWPLCFLPCLMSADNNEYLYCANCRAFLGIY 219


>X87141-1|CAA60619.1|  722|Drosophila melanogaster VND (ventral
           nervous system defective)protein.
          Length = 722

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 73  TLHRERQSSHPEQQHPGHRESYVPDRRALRVKHATKLLSP 192
           T       SHP+QQHP H++ + P    L  +H  + ++P
Sbjct: 283 TTEHHAPPSHPQQQHPHHQQHHHP-HLLLPQQHHQQAVAP 321


>AL031883-2|CAA21410.1|  723|Drosophila melanogaster
           EG:118B3.1,FBgn0003986;vnd protein.
          Length = 723

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 73  TLHRERQSSHPEQQHPGHRESYVPDRRALRVKHATKLLSP 192
           T       SHP+QQHP H++ + P    L  +H  + ++P
Sbjct: 284 TTEHHAPPSHPQQQHPHHQQHHHP-HLLLPQQHHQQAVAP 322


>AE014298-61|AAF45521.1|  723|Drosophila melanogaster CG6172-PA,
           isoform A protein.
          Length = 723

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 73  TLHRERQSSHPEQQHPGHRESYVPDRRALRVKHATKLLSP 192
           T       SHP+QQHP H++ + P    L  +H  + ++P
Sbjct: 284 TTEHHAPPSHPQQQHPHHQQHHHP-HLLLPQQHHQQAVAP 322


>AE014298-60|ABI30961.1|  577|Drosophila melanogaster CG6172-PB,
           isoform B protein.
          Length = 577

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 73  TLHRERQSSHPEQQHPGHRESYVPDRRALRVKHATKLLSP 192
           T       SHP+QQHP H++ + P    L  +H  + ++P
Sbjct: 138 TTEHHAPPSHPQQQHPHHQQHHHP-HLLLPQQHHQQAVAP 176


>AE014296-3097|AAF49199.1|  530|Drosophila melanogaster CG18136-PA
           protein.
          Length = 530

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 261 CCGCLFPYCMRSCKTANHYCPQCKAFLGS 347
           C  C +P C + C+ + H+  +C+   GS
Sbjct: 111 CSSCSWPLCGKECEDSVHHKAECQLMSGS 139


>BT021316-1|AAX33464.1|  916|Drosophila melanogaster RE12330p
           protein.
          Length = 916

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 40  HHRRPVW*SLQTLH-RERQSSHPEQQHPGHRESYVP 144
           H ++P   S Q  H +++Q +  +QQHP  + SY P
Sbjct: 251 HQQQPQQLSQQQPHPQQQQLAQQQQQHPQQQRSYAP 286


>AY113356-1|AAM29361.1|  347|Drosophila melanogaster GM13546p
           protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +3

Query: 207 PNNRTHIISAALCVISSCC-CGCLFPYCMRSCKTANHYC 320
           P++    + A  C+   C  CGC  P+    CK A HYC
Sbjct: 111 PSDVGQPLPAVPCLKKLCAACGCHAPHACSKCK-AIHYC 148


>AF227213-2|AAF43020.1|  912|Drosophila melanogaster Tara 1B isoform
           protein.
          Length = 912

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 40  HHRRPVW*SLQTLH-RERQSSHPEQQHPGHRESYVP 144
           H ++P   S Q  H +++Q +  +QQHP  + SY P
Sbjct: 247 HQQQPQQLSQQQPHPQQQQLAQQQQQHPQQQRSYAP 282


>AF227213-1|AAF43019.1|  916|Drosophila melanogaster Tara 1A isoform
           protein.
          Length = 916

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 40  HHRRPVW*SLQTLH-RERQSSHPEQQHPGHRESYVP 144
           H ++P   S Q  H +++Q +  +QQHP  + SY P
Sbjct: 251 HQQQPQQLSQQQPHPQQQQLAQQQQQHPQQQRSYAP 286


>AF227212-1|AAF43018.1|  912|Drosophila melanogaster Tara 1B isoform
           protein.
          Length = 912

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 40  HHRRPVW*SLQTLH-RERQSSHPEQQHPGHRESYVP 144
           H ++P   S Q  H +++Q +  +QQHP  + SY P
Sbjct: 247 HQQQPQQLSQQQPHPQQQQLAQQQQQHPQQQRSYAP 282


>AF227211-1|AAF43017.1|  916|Drosophila melanogaster Tara 1A isoform
           protein.
          Length = 916

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 40  HHRRPVW*SLQTLH-RERQSSHPEQQHPGHRESYVP 144
           H ++P   S Q  H +++Q +  +QQHP  + SY P
Sbjct: 251 HQQQPQQLSQQQPHPQQQQLAQQQQQHPQQQRSYAP 286


>AE014297-2169|AAN13701.1|  912|Drosophila melanogaster CG6889-PB,
           isoform B protein.
          Length = 912

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 40  HHRRPVW*SLQTLH-RERQSSHPEQQHPGHRESYVP 144
           H ++P   S Q  H +++Q +  +QQHP  + SY P
Sbjct: 247 HQQQPQQLSQQQPHPQQQQLAQQQQQHPQQQRSYAP 282


>AE014297-2168|AAF55288.2|  916|Drosophila melanogaster CG6889-PA,
           isoform A protein.
          Length = 916

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 40  HHRRPVW*SLQTLH-RERQSSHPEQQHPGHRESYVP 144
           H ++P   S Q  H +++Q +  +QQHP  + SY P
Sbjct: 251 HQQQPQQLSQQQPHPQQQQLAQQQQQHPQQQRSYAP 286


>AE013599-3824|AAF47170.1|  347|Drosophila melanogaster CG3260-PA
           protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +3

Query: 207 PNNRTHIISAALCVISSCC-CGCLFPYCMRSCKTANHYC 320
           P++    + A  C+   C  CGC  P+    CK A HYC
Sbjct: 111 PSDVGQPLPAVPCLKKLCAACGCHAPHACSKCK-AIHYC 148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,682,626
Number of Sequences: 53049
Number of extensions: 551336
Number of successful extensions: 2136
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2110
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -