BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_O16
(488 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT030179-1|ABN49318.1| 82|Drosophila melanogaster IP17830p pro... 29 4.5
AE013599-3412|AAF46861.2| 1301|Drosophila melanogaster CG4294-PA... 29 4.5
AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p pro... 28 6.0
AY069032-1|AAL39177.1| 852|Drosophila melanogaster GH01474p pro... 28 6.0
AE014298-3115|AAN09674.1| 852|Drosophila melanogaster CG1486-PB... 28 6.0
AE014298-3114|AAF50832.1| 852|Drosophila melanogaster CG1486-PA... 28 6.0
AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-P... 28 6.0
AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-P... 28 6.0
AY095027-1|AAM11355.1| 1379|Drosophila melanogaster LD11664p pro... 28 7.9
AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-P... 28 7.9
AE014296-865|AAF47915.2| 585|Drosophila melanogaster CG32242-PA... 28 7.9
>BT030179-1|ABN49318.1| 82|Drosophila melanogaster IP17830p
protein.
Length = 82
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 225 QRSPPPSIQGPIVEPMPPRLSHDHN 299
Q++PPP Q P P PP SH HN
Sbjct: 56 QQAPPPYYQNP-PPPPPPGSSHYHN 79
>AE013599-3412|AAF46861.2| 1301|Drosophila melanogaster CG4294-PA
protein.
Length = 1301
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 371 APTMSINQNAGQFSKQKQQVGKQGPEPVNFPPRYHPPP 484
APTM+ + A + + +K QV ++ P+ V P+ PPP
Sbjct: 847 APTMNSPEAAKENTSEKPQVKEEPPKSVT-SPKTQPPP 883
>AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p
protein.
Length = 1413
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = +2
Query: 431 GKQGPEPV-NFPPRYHPPPP 487
G GP P N PP YH PPP
Sbjct: 26 GYPGPGPAGNGPPHYHLPPP 45
>AY069032-1|AAL39177.1| 852|Drosophila melanogaster GH01474p
protein.
Length = 852
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 198 ATVHGLRSRQRSPPPSIQGPIVEP-MPP 278
AT H L + + P P +Q P+V P +PP
Sbjct: 747 ATAHQLPANRSPPTPMVQTPVVAPALPP 774
>AE014298-3115|AAN09674.1| 852|Drosophila melanogaster CG1486-PB,
isoform B protein.
Length = 852
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 198 ATVHGLRSRQRSPPPSIQGPIVEP-MPP 278
AT H L + + P P +Q P+V P +PP
Sbjct: 747 ATAHQLPANRSPPTPMVQTPVVAPALPP 774
>AE014298-3114|AAF50832.1| 852|Drosophila melanogaster CG1486-PA,
isoform A protein.
Length = 852
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 198 ATVHGLRSRQRSPPPSIQGPIVEP-MPP 278
AT H L + + P P +Q P+V P +PP
Sbjct: 747 ATAHQLPANRSPPTPMVQTPVVAPALPP 774
>AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-PA,
isoform A protein.
Length = 1413
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = +2
Query: 431 GKQGPEPV-NFPPRYHPPPP 487
G GP P N PP YH PPP
Sbjct: 26 GYPGPGPAGNGPPHYHLPPP 45
>AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-PB,
isoform B protein.
Length = 1700
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = +2
Query: 431 GKQGPEPV-NFPPRYHPPPP 487
G GP P N PP YH PPP
Sbjct: 313 GYPGPGPAGNGPPHYHLPPP 332
>AY095027-1|AAM11355.1| 1379|Drosophila melanogaster LD11664p
protein.
Length = 1379
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 186 NCANATVHGLRSRQRSPPPSIQGPIVEPMPPRLSH-DH 296
N A G + Q+ PPPS+Q P + P L+H DH
Sbjct: 254 NIAGQDNQGFPNLQQ-PPPSLQRPTPQQQQPHLNHMDH 290
>AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-PC
protein.
Length = 1884
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 186 NCANATVHGLRSRQRSPPPSIQGPIVEPMPPRLSH-DH 296
N A G + Q+ PPPS+Q P + P L+H DH
Sbjct: 254 NIAGQDNQGFPNLQQ-PPPSLQRPTPQQQQPHLNHMDH 290
>AE014296-865|AAF47915.2| 585|Drosophila melanogaster CG32242-PA
protein.
Length = 585
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 189 CANATVHGLRSRQRSPPPSIQGPIVEPMPPRLSHDHN 299
C + V G R +Q P SIQ P P ++H HN
Sbjct: 135 CCSCQVDGYR-QQFPPLSSIQAKDYSPQSPVINHSHN 170
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,427,691
Number of Sequences: 53049
Number of extensions: 452481
Number of successful extensions: 1905
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1899
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -