Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_O03
(532 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 52 3e-07
L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical p... 38 0.006
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 37 0.010
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 37 0.010
L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical pr... 35 0.032
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 34 0.073
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 33 0.097
Z74033-5|CAF31473.1| 333|Caenorhabditis elegans Hypothetical pr... 31 0.39
U64836-2|AAG24060.2| 137|Caenorhabditis elegans Serpentine rece... 31 0.68
U64836-1|AAX22289.1| 321|Caenorhabditis elegans Serpentine rece... 31 0.68
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 29 2.1
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 27 6.3
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 27 6.3
AF016430-11|AAB65375.1| 387|Caenorhabditis elegans Hypothetical... 27 6.3
U56963-4|AAB38117.2| 316|Caenorhabditis elegans Serpentine rece... 27 8.4
U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer ... 27 8.4
U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer ... 27 8.4
U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer ... 27 8.4
AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein. 27 8.4
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 52.0 bits (119), Expect = 3e-07
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Frame = -2
Query: 528 RAQDKLLVESFSAVQSA---WYTASFNAQALQPTMVETYHKGLETLQKELENRGTKYLHG 358
+A K+LVE S + +A +Y +S N QA + + H L + L R T Y G
Sbjct: 184 KAHQKILVERLSPIMNALFEFYGSSNNPQAQRQNDMNV-HSALRNSENLL--RDTFY-GG 239
Query: 357 DQPGWVDYTLWPFLERFEALPLLGKTEFAIEKD-KYEILLNYIEAMKTVPAVKSY 196
QPG+ DY +WPFLER + L + ++F Y + YI M+ P V +
Sbjct: 240 RQPGYADYLMWPFLERLQLLTMSPNSQFRYFPGLHYPKIGAYIARMQNQPEVLGF 294
>L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical
protein C29E4.7 protein.
Length = 250
Score = 37.5 bits (83), Expect = 0.006
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
Frame = -2
Query: 528 RAQDKLLVESFSAVQSAWYTASFNAQALQPTMVETYHKGLETLQKELENRGTKYLHGDQP 349
+ Q KLL + +AV A F + E K E L++ + G QP
Sbjct: 110 KVQQKLLADRLTAVAHA-VPLLFAVMRDRTLKDEKQRKVFEVLKQAENLLANDFYAGSQP 168
Query: 348 GWVDYTLWPFLER-FEALPLLGKTEF-AIE---KDKYEILLNYIEAMKTVPAVKSYYLSA 184
G+ DY +PF E+ + + L G + IE +++Y L + + M + V+S S
Sbjct: 169 GYPDYLSFPFFEKIWWSASLDGVVDLPTIEFPGEEEYPKLTKWFQKMISSDVVQSVTQSL 228
Query: 183 ETHAKFIESRA-KGDANYNM 127
E A F+ + A + NY++
Sbjct: 229 EHGAAFMNAYATHQELNYDL 248
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 36.7 bits (81), Expect = 0.010
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Frame = -2
Query: 528 RAQDKLLVESFSA-VQSAWY---TASFNAQALQPTMVETYHKGLETLQKELENRGTKYLH 361
+ Q KLL++ S + SA+Y A+ + L+ +VE K +T ++ L G Y
Sbjct: 114 KVQQKLLLDRISGQLSSAFYGVVQAAKISDLLKEKLVELA-KAYDTAEELLT--GDFYSG 170
Query: 360 GDQPGWVDYTLWPFLER-FEALPLLGKTEFAIEK---DKYEILLNYIEAMKTVPAVKSYY 193
+PG+VDY ++P ++R F ++ +E Y L + + + ++P V +
Sbjct: 171 TSKPGFVDYLIYPNIQRAFWTSHIIKDFPLKVESFPGPNYPKLSKWYKRLDSIPEVIATS 230
Query: 192 LSAETHAKFIESRAKGDANYN 130
ET +F +S G N++
Sbjct: 231 QPTETAVEFFKSWIIGAPNFD 251
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 36.7 bits (81), Expect = 0.010
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Frame = -2
Query: 528 RAQDKLLVESFSA-VQSAWY---TASFNAQALQPTMVETYHKGLETLQKELENRGTKYLH 361
+ Q KLL++ S + SA+Y A+ + L+ +VE K +T ++ L G Y
Sbjct: 397 KVQQKLLLDRISGQLSSAFYGVVQAAKISDLLKEKLVELA-KAYDTAEELLT--GDFYSG 453
Query: 360 GDQPGWVDYTLWPFLER-FEALPLLGKTEFAIEK---DKYEILLNYIEAMKTVPAVKSYY 193
+PG+VDY ++P ++R F ++ +E Y L + + + ++P V +
Sbjct: 454 TSKPGFVDYLIYPNIQRAFWTSHIIKDFPLKVESFPGPNYPKLSKWYKRLDSIPEVIATS 513
Query: 192 LSAETHAKFIESRAKGDANYN 130
ET +F +S G N++
Sbjct: 514 QPTETAVEFFKSWIIGAPNFD 534
Score = 35.1 bits (77), Expect = 0.032
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 10/143 (6%)
Frame = -2
Query: 528 RAQDKLLVESFSA-VQSAWYTASFNAQALQ-PTMVETYHKGLETLQKELEN--RGTKYLH 361
+ Q KLL++ S V A+Y QA++ P + E ++ E G Y
Sbjct: 106 KVQQKLLLDRISGQVSPAFYGV---VQAVKNPDLREEKFADIKKAYDNAEQLLTGDFYSG 162
Query: 360 GDQPGWVDYTLWPFLER-FEALPLLGKTEFAIEKD-----KYEILLNYIEAMKTVPAVKS 199
+PG+VDY L+P ++R + A ++ +F +E + Y L + +A++++P V +
Sbjct: 163 TSKPGFVDYLLYPNIQRAYWAAHIV--PDFPLEAESFPGPNYPRLSKWYKALESIPEVAA 220
Query: 198 YYLSAETHAKFIESRAKGDANYN 130
E F + G NY+
Sbjct: 221 ASQPTENGVGFFKDYLGGSPNYD 243
>L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical
protein C02D5.3b protein.
Length = 246
Score = 35.1 bits (77), Expect = 0.032
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 10/143 (6%)
Frame = -2
Query: 528 RAQDKLLVESFSA-VQSAWYTASFNAQALQ-PTMVETYHKGLETLQKELEN--RGTKYLH 361
+ Q KLL++ S V A+Y QA++ P + E ++ E G Y
Sbjct: 106 KVQQKLLLDRISGQVSPAFYGV---VQAVKNPDLREEKFADIKKAYDNAEQLLTGDFYSG 162
Query: 360 GDQPGWVDYTLWPFLER-FEALPLLGKTEFAIEKD-----KYEILLNYIEAMKTVPAVKS 199
+PG+VDY L+P ++R + A ++ +F +E + Y L + +A++++P V +
Sbjct: 163 TSKPGFVDYLLYPNIQRAYWAAHIV--PDFPLEAESFPGPNYPRLSKWYKALESIPEVAA 220
Query: 198 YYLSAETHAKFIESRAKGDANYN 130
E F + G NY+
Sbjct: 221 ASQPTENGVGFFKDYLGGSPNYD 243
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 33.9 bits (74), Expect = 0.073
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 6/134 (4%)
Frame = -2
Query: 528 RAQDKLLVESFSAVQSAWYTASFNAQALQPTMVETYHKGLETLQK-ELENRGTKYLHGDQ 352
+ Q KLL+E S + + F A + E + L+ ++ E G Y
Sbjct: 114 KVQQKLLLERLSDQLTPAFGRVFRAIKNPEELKEKFESILKAFEEAESLLEGAFYSGTSS 173
Query: 351 PGWVDYTLWPFLERFEALPLLGKTEFAIEKDK-----YEILLNYIEAMKTVPAVKSYYLS 187
PG+VDY ++P +R L L + F + D Y L + +A+ +P V + S
Sbjct: 174 PGFVDYLIYPSFQRVYWLTFLLEI-FPLPSDNFPGPGYPKLSQWFKAITAIPEVAAASQS 232
Query: 186 AETHAKFIESRAKG 145
E + KG
Sbjct: 233 TENGVGSCKEYMKG 246
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 33.5 bits (73), Expect = 0.097
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -2
Query: 375 TKYLHGDQPGWVDYTLWPFLERFEALPLLGKTEFAIEKDKYEILLNYIEAMKT 217
T+ LH D P W++ W L+ + + G T FAI K+ L +++A KT
Sbjct: 2075 TEDLHADMPSWIEEHFWRCLKWVRSHKISGITSFAILKNG----LTHLKASKT 2123
>Z74033-5|CAF31473.1| 333|Caenorhabditis elegans Hypothetical
protein F38B7.7 protein.
Length = 333
Score = 31.5 bits (68), Expect = 0.39
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +1
Query: 211 WNCLHCFNVV*QNFIFVLFNGKLSFTKQW*CFKAFQKWPQSIIYPTRLITV 363
W CLH + FI ++FN +LSF ++ K FQ P S +P + TV
Sbjct: 285 WQCLHSID----GFIMIMFNERLSFLRR----KLFQT-PSSTQHPNQKFTV 326
>U64836-2|AAG24060.2| 137|Caenorhabditis elegans Serpentine
receptor, class x protein92, isoform a protein.
Length = 137
Score = 30.7 bits (66), Expect = 0.68
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 211 WNCLHCFNVV*QNFIFVLFNGKLSFTK 291
W CLH F+ FI ++FN +LSF K
Sbjct: 85 WECLHSFD----GFIMIIFNERLSFLK 107
>U64836-1|AAX22289.1| 321|Caenorhabditis elegans Serpentine
receptor, class x protein92, isoform b protein.
Length = 321
Score = 30.7 bits (66), Expect = 0.68
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 211 WNCLHCFNVV*QNFIFVLFNGKLSFTK 291
W CLH F+ FI ++FN +LSF K
Sbjct: 269 WECLHSFD----GFIMIIFNERLSFLK 291
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = +1
Query: 268 NGKLSFTKQW*CFKAFQKWPQSIIYPTRLITV*VLCTAVFKFLLQCFETFVVSFDHSRLE 447
NG + T ++F+K + PT+LI V + C + +++FD +
Sbjct: 853 NGTIVQTIPLYSMESFKKLTNKKLIPTQLIEKGVKIEHIISIRSSCASSIIIAFDEDEIN 912
Query: 448 CLSIER 465
++IE+
Sbjct: 913 NMAIEK 918
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical
protein R13G10.1 protein.
Length = 1469
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 321 FLERFEALPLLGKTEFAIEKDKYEILLNYIEAMKTVPAVKSYYLSAETH 175
F + E LP L TE + KYE+ IEA T + +A+ H
Sbjct: 564 FDKAVEKLPHLKSTEQLLRSKKYELDQEVIEASNTQEVTYRHQATAKLH 612
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 321 FLERFEALPLLGKTEFAIEKDKYEILLNYIEAMKTVPAVKSYYLSAETH 175
F + E LP L TE + KYE+ IEA T + +A+ H
Sbjct: 564 FDKAVEKLPHLKSTEQLLRSKKYELDQEVIEASNTQEVTYRHQATAKLH 612
>AF016430-11|AAB65375.1| 387|Caenorhabditis elegans Hypothetical
protein C05C8.8 protein.
Length = 387
Score = 27.5 bits (58), Expect = 6.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 8 VFFCLQIVLYCFQIEQIFNSI 70
V CL+++++CF + IFN I
Sbjct: 9 VILCLRLIIFCFGLGIIFNQI 29
>U56963-4|AAB38117.2| 316|Caenorhabditis elegans Serpentine
receptor, class v protein29 protein.
Length = 316
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -2
Query: 249 ILLNYIEA--MKTVPAVKSYYLSAET 178
I++NYI ++TVP +K YY +T
Sbjct: 58 IMVNYIATWGLRTVPGIKDYYFKYQT 83
>U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform c protein.
Length = 796
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 236 TLKQ*RQFQLSSHITCRRRLTLNLL-SPVPREMPTTIC 126
TLK+ QL+++ T R RL+LNL+ + + RE C
Sbjct: 112 TLKESELIQLNAYRTKRNRLSLNLVKNNIDREFDQKAC 149
>U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform a protein.
Length = 892
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 236 TLKQ*RQFQLSSHITCRRRLTLNLL-SPVPREMPTTIC 126
TLK+ QL+++ T R RL+LNL+ + + RE C
Sbjct: 208 TLKESELIQLNAYRTKRNRLSLNLVKNNIDREFDQKAC 245
>U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform b protein.
Length = 864
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 236 TLKQ*RQFQLSSHITCRRRLTLNLL-SPVPREMPTTIC 126
TLK+ QL+++ T R RL+LNL+ + + RE C
Sbjct: 174 TLKESELIQLNAYRTKRNRLSLNLVKNNIDREFDQKAC 211
>AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein.
Length = 796
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 236 TLKQ*RQFQLSSHITCRRRLTLNLL-SPVPREMPTTIC 126
TLK+ QL+++ T R RL+LNL+ + + RE C
Sbjct: 112 TLKESELIQLNAYRTKRNRLSLNLVKNNIDREFDQKAC 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,375,166
Number of Sequences: 27780
Number of extensions: 257000
Number of successful extensions: 910
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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