Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_N23
(572 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 72 7e-14
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 72 7e-14
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 72 7e-14
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 72 7e-14
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 72 7e-14
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 72 7e-14
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 72 7e-14
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 72 7e-14
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 72 7e-14
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 72 7e-14
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 72 7e-14
SPCC1020.10 |oca2||serine/threonine protein kinase Oca2 |Schizos... 29 0.37
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 27 1.5
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.4
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 25 6.0
SPBC1683.12 |||nicotinic acid plasma membrane transporter |Schiz... 25 6.0
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 25 6.0
SPBC1347.13c |||ribose methyltransferase|Schizosaccharomyces pom... 25 6.0
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 25 7.9
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 71.7 bits (168), Expect = 7e-14
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Frame = +2
Query: 11 FTTDIRYIAGDHNHVADALSRV----ESINKTMDLNKIHTAQE----NDSELQQLVENNS 166
F +I Y G NH+ADALSR+ E I K + N I+ + +D + Q + E +
Sbjct: 811 FNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTN 870
Query: 167 SSLKLQLLHFSDFRKKLYCDTS-----GTSPRLYLPSEFR--RQAFDTIHG---LNHPGA 316
+ L LL+ D R + + ++ LP++ + R H L HPG
Sbjct: 871 DTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGI 930
Query: 317 KTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTK-SPVHAFTPPTSRFSHVHVD 493
+ +I R+ W IRK + + + C CQ +K H P+ P + + +D
Sbjct: 931 ELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMD 990
Query: 494 IIGPLPISNGFKYCLTAVDRFTR 562
I LP S+G+ VDRF++
Sbjct: 991 FITALPESSGYNALFVVVDRFSK 1013
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 71.7 bits (168), Expect = 7e-14
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Frame = +2
Query: 11 FTTDIRYIAGDHNHVADALSRV----ESINKTMDLNKIHTAQE----NDSELQQLVENNS 166
F +I Y G NH+ADALSR+ E I K + N I+ + +D + Q + E +
Sbjct: 811 FNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTN 870
Query: 167 SSLKLQLLHFSDFRKKLYCDTS-----GTSPRLYLPSEFR--RQAFDTIHG---LNHPGA 316
+ L LL+ D R + + ++ LP++ + R H L HPG
Sbjct: 871 DTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGI 930
Query: 317 KTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTK-SPVHAFTPPTSRFSHVHVD 493
+ +I R+ W IRK + + + C CQ +K H P+ P + + +D
Sbjct: 931 ELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMD 990
Query: 494 IIGPLPISNGFKYCLTAVDRFTR 562
I LP S+G+ VDRF++
Sbjct: 991 FITALPESSGYNALFVVVDRFSK 1013
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 71.7 bits (168), Expect = 7e-14
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Frame = +2
Query: 11 FTTDIRYIAGDHNHVADALSRV----ESINKTMDLNKIHTAQE----NDSELQQLVENNS 166
F +I Y G NH+ADALSR+ E I K + N I+ + +D + Q + E +
Sbjct: 811 FNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTN 870
Query: 167 SSLKLQLLHFSDFRKKLYCDTS-----GTSPRLYLPSEFR--RQAFDTIHG---LNHPGA 316
+ L LL+ D R + + ++ LP++ + R H L HPG
Sbjct: 871 DTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGI 930
Query: 317 KTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTK-SPVHAFTPPTSRFSHVHVD 493
+ +I R+ W IRK + + + C CQ +K H P+ P + + +D
Sbjct: 931 ELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMD 990
Query: 494 IIGPLPISNGFKYCLTAVDRFTR 562
I LP S+G+ VDRF++
Sbjct: 991 FITALPESSGYNALFVVVDRFSK 1013
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 71.7 bits (168), Expect = 7e-14
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Frame = +2
Query: 11 FTTDIRYIAGDHNHVADALSRV----ESINKTMDLNKIHTAQE----NDSELQQLVENNS 166
F +I Y G NH+ADALSR+ E I K + N I+ + +D + Q + E +
Sbjct: 811 FNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTN 870
Query: 167 SSLKLQLLHFSDFRKKLYCDTS-----GTSPRLYLPSEFR--RQAFDTIHG---LNHPGA 316
+ L LL+ D R + + ++ LP++ + R H L HPG
Sbjct: 871 DTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGI 930
Query: 317 KTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTK-SPVHAFTPPTSRFSHVHVD 493
+ +I R+ W IRK + + + C CQ +K H P+ P + + +D
Sbjct: 931 ELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMD 990
Query: 494 IIGPLPISNGFKYCLTAVDRFTR 562
I LP S+G+ VDRF++
Sbjct: 991 FITALPESSGYNALFVVVDRFSK 1013
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 71.7 bits (168), Expect = 7e-14
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Frame = +2
Query: 11 FTTDIRYIAGDHNHVADALSRV----ESINKTMDLNKIHTAQE----NDSELQQLVENNS 166
F +I Y G NH+ADALSR+ E I K + N I+ + +D + Q + E +
Sbjct: 811 FNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTN 870
Query: 167 SSLKLQLLHFSDFRKKLYCDTS-----GTSPRLYLPSEFR--RQAFDTIHG---LNHPGA 316
+ L LL+ D R + + ++ LP++ + R H L HPG
Sbjct: 871 DTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGI 930
Query: 317 KTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTK-SPVHAFTPPTSRFSHVHVD 493
+ +I R+ W IRK + + + C CQ +K H P+ P + + +D
Sbjct: 931 ELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMD 990
Query: 494 IIGPLPISNGFKYCLTAVDRFTR 562
I LP S+G+ VDRF++
Sbjct: 991 FITALPESSGYNALFVVVDRFSK 1013
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 71.7 bits (168), Expect = 7e-14
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Frame = +2
Query: 11 FTTDIRYIAGDHNHVADALSRV----ESINKTMDLNKIHTAQE----NDSELQQLVENNS 166
F +I Y G NH+ADALSR+ E I K + N I+ + +D + Q + E +
Sbjct: 811 FNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTN 870
Query: 167 SSLKLQLLHFSDFRKKLYCDTS-----GTSPRLYLPSEFR--RQAFDTIHG---LNHPGA 316
+ L LL+ D R + + ++ LP++ + R H L HPG
Sbjct: 871 DTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGI 930
Query: 317 KTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTK-SPVHAFTPPTSRFSHVHVD 493
+ +I R+ W IRK + + + C CQ +K H P+ P + + +D
Sbjct: 931 ELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMD 990
Query: 494 IIGPLPISNGFKYCLTAVDRFTR 562
I LP S+G+ VDRF++
Sbjct: 991 FITALPESSGYNALFVVVDRFSK 1013
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 71.7 bits (168), Expect = 7e-14
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Frame = +2
Query: 11 FTTDIRYIAGDHNHVADALSRV----ESINKTMDLNKIHTAQE----NDSELQQLVENNS 166
F +I Y G NH+ADALSR+ E I K + N I+ + +D + Q + E +
Sbjct: 811 FNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTN 870
Query: 167 SSLKLQLLHFSDFRKKLYCDTS-----GTSPRLYLPSEFR--RQAFDTIHG---LNHPGA 316
+ L LL+ D R + + ++ LP++ + R H L HPG
Sbjct: 871 DTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGI 930
Query: 317 KTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTK-SPVHAFTPPTSRFSHVHVD 493
+ +I R+ W IRK + + + C CQ +K H P+ P + + +D
Sbjct: 931 ELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMD 990
Query: 494 IIGPLPISNGFKYCLTAVDRFTR 562
I LP S+G+ VDRF++
Sbjct: 991 FITALPESSGYNALFVVVDRFSK 1013
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 71.7 bits (168), Expect = 7e-14
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Frame = +2
Query: 11 FTTDIRYIAGDHNHVADALSRV----ESINKTMDLNKIHTAQE----NDSELQQLVENNS 166
F +I Y G NH+ADALSR+ E I K + N I+ + +D + Q + E +
Sbjct: 811 FNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTN 870
Query: 167 SSLKLQLLHFSDFRKKLYCDTS-----GTSPRLYLPSEFR--RQAFDTIHG---LNHPGA 316
+ L LL+ D R + + ++ LP++ + R H L HPG
Sbjct: 871 DTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGI 930
Query: 317 KTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTK-SPVHAFTPPTSRFSHVHVD 493
+ +I R+ W IRK + + + C CQ +K H P+ P + + +D
Sbjct: 931 ELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMD 990
Query: 494 IIGPLPISNGFKYCLTAVDRFTR 562
I LP S+G+ VDRF++
Sbjct: 991 FITALPESSGYNALFVVVDRFSK 1013
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 71.7 bits (168), Expect = 7e-14
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Frame = +2
Query: 11 FTTDIRYIAGDHNHVADALSRV----ESINKTMDLNKIHTAQE----NDSELQQLVENNS 166
F +I Y G NH+ADALSR+ E I K + N I+ + +D + Q + E +
Sbjct: 811 FNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTN 870
Query: 167 SSLKLQLLHFSDFRKKLYCDTS-----GTSPRLYLPSEFR--RQAFDTIHG---LNHPGA 316
+ L LL+ D R + + ++ LP++ + R H L HPG
Sbjct: 871 DTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGI 930
Query: 317 KTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTK-SPVHAFTPPTSRFSHVHVD 493
+ +I R+ W IRK + + + C CQ +K H P+ P + + +D
Sbjct: 931 ELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMD 990
Query: 494 IIGPLPISNGFKYCLTAVDRFTR 562
I LP S+G+ VDRF++
Sbjct: 991 FITALPESSGYNALFVVVDRFSK 1013
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 71.7 bits (168), Expect = 7e-14
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Frame = +2
Query: 11 FTTDIRYIAGDHNHVADALSRV----ESINKTMDLNKIHTAQE----NDSELQQLVENNS 166
F +I Y G NH+ADALSR+ E I K + N I+ + +D + Q + E +
Sbjct: 811 FNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTN 870
Query: 167 SSLKLQLLHFSDFRKKLYCDTS-----GTSPRLYLPSEFR--RQAFDTIHG---LNHPGA 316
+ L LL+ D R + + ++ LP++ + R H L HPG
Sbjct: 871 DTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGI 930
Query: 317 KTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTK-SPVHAFTPPTSRFSHVHVD 493
+ +I R+ W IRK + + + C CQ +K H P+ P + + +D
Sbjct: 931 ELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMD 990
Query: 494 IIGPLPISNGFKYCLTAVDRFTR 562
I LP S+G+ VDRF++
Sbjct: 991 FITALPESSGYNALFVVVDRFSK 1013
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 71.7 bits (168), Expect = 7e-14
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Frame = +2
Query: 11 FTTDIRYIAGDHNHVADALSRV----ESINKTMDLNKIHTAQE----NDSELQQLVENNS 166
F +I Y G NH+ADALSR+ E I K + N I+ + +D + Q + E +
Sbjct: 811 FNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTN 870
Query: 167 SSLKLQLLHFSDFRKKLYCDTS-----GTSPRLYLPSEFR--RQAFDTIHG---LNHPGA 316
+ L LL+ D R + + ++ LP++ + R H L HPG
Sbjct: 871 DTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGI 930
Query: 317 KTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTK-SPVHAFTPPTSRFSHVHVD 493
+ +I R+ W IRK + + + C CQ +K H P+ P + + +D
Sbjct: 931 ELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMD 990
Query: 494 IIGPLPISNGFKYCLTAVDRFTR 562
I LP S+G+ VDRF++
Sbjct: 991 FITALPESSGYNALFVVVDRFSK 1013
>SPCC1020.10 |oca2||serine/threonine protein kinase Oca2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 29.5 bits (63), Expect = 0.37
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 23 IRYIAGDHNHVADALSRVESINKTMDLNKIHTA-QENDSELQQLVENNSSSLKLQLLHFS 199
++ + +H+ D + E + ++DL + + Q+ D E + V + SS LQ HF
Sbjct: 237 LKSLVPNHHDKHDKHDKHEKHHSSLDLRRFFKSHQKTDKEKKPSVSKSKSSANLQDDHFG 296
Query: 200 DFRK 211
F+K
Sbjct: 297 LFKK 300
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 27.5 bits (58), Expect = 1.5
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 53 VADALSRVESINKTMDLNKIHTAQENDSELQQLVENNSSSLKLQLLHFSDFRKKLY 220
V AL+ V+SI + + L + T + D +V ++K++ L FSD +K+Y
Sbjct: 726 VLKALNVVQSILEFLVLRR--TKETKDRNGNSIVTLPPKTVKIEYLDFSDSERKIY 779
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 140 LQQLVENNSSSLKLQLLHFSDFRKKLYCDTSGTSPRLYLPSEFRRQAFD 286
L+ L + SS KL+L+ ++ +L DT+ L+ PS+ R + FD
Sbjct: 64 LEPLKRDFSSMDKLKLIGKITYKLRLKGDTALKFAYLHAPSDVRDKVFD 112
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 25.4 bits (53), Expect = 6.0
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +2
Query: 101 LNKIHTAQENDSELQQLVENNSSSLKLQLLHFSDFRKKLYCDTSGTSPRL 250
L+ T E +S + + NNSSS + R+ + S TSP L
Sbjct: 177 LSSFKTLSERESHVANCLSNNSSSPRNMTEFLKHARRYISMQLSETSPCL 226
>SPBC1683.12 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 25.4 bits (53), Expect = 6.0
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 415 KSYTPHEVASACIYTTN-EQIFSCTCRYYWT 504
K + PH SA I + IF+C R+YW+
Sbjct: 104 KKFGPHYYLSAMIIGWSLVTIFTCFVRHYWS 134
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 25.4 bits (53), Expect = 6.0
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +2
Query: 53 VADALSRVESINKTMDLNKI--HTAQENDSELQQLVENN--SSSLKLQLLHFSDFRKKLY 220
V + S V S +D KI T + N Q++E+ + KL++ S RK L
Sbjct: 181 VLNLQSHVSSKESELDRFKIKLETEESNWKVRLQVLESKLATQDRKLRMQKKSTERKSLL 240
Query: 221 CDTSGTSPRLYLPSE 265
+SP+L+ PS+
Sbjct: 241 VSPRVSSPKLFSPSK 255
>SPBC1347.13c |||ribose methyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 25.4 bits (53), Expect = 6.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 402 TVSVQKLHATRSRQCMHLHHQRADFLMYMSILLDHYRFRM 521
T SV+ ATR R+C L+ Q AD L+ ++++
Sbjct: 37 THSVKNALATRKRECRALYVQNADIHSEFEEFLNKLQYKI 76
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 25.0 bits (52), Expect = 7.9
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +2
Query: 47 NHVADALSRVESINKTMDLNKIHTAQENDSELQQLVENNSSSLKLQLLHFSD----FRKK 214
N + + +E+I+ + + +H E SEL + V+ S L+ +SD F+K+
Sbjct: 41 NTIDEGDENLEAIDGKLG-SLLHLTSEGVSELPEAVQRRISGLRGLQKRYSDLESQFQKE 99
Query: 215 LYCDTSGTSPRLYLPSEFRRQAFDTIHGLNHP 310
L+ + + Y P F+R++ + + G + P
Sbjct: 100 LF-ELEKAYAKKYAPI-FKRRS-EVVRGADEP 128
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,338,006
Number of Sequences: 5004
Number of extensions: 47948
Number of successful extensions: 180
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 244081442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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