Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_N22
(515 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119128-1|AAM50988.1| 684|Drosophila melanogaster RE31408p pro... 178 3e-45
AE014297-2556|AAF55578.2| 684|Drosophila melanogaster CG7698-PA... 178 3e-45
AJ277968-1|CAB96205.1| 1128|Drosophila melanogaster TRPgamma cat... 29 3.7
AJ277967-1|CAB96204.1| 1128|Drosophila melanogaster TRPgamma cat... 29 3.7
AF221101-1|AAF26743.1| 839|Drosophila melanogaster septin inter... 29 3.7
AF145670-1|AAD38645.1| 839|Drosophila melanogaster BcDNA.GH1169... 29 3.7
AE014134-2741|AAN10950.1| 1128|Drosophila melanogaster CG5996-PB... 29 3.7
AE014134-2740|AAF53548.2| 1128|Drosophila melanogaster CG5996-PA... 29 3.7
AE014134-961|AAF52282.1| 839|Drosophila melanogaster CG7238-PA ... 29 3.7
BT001439-1|AAN71194.1| 1040|Drosophila melanogaster GH25102p pro... 28 6.5
AE013599-3262|AAF46757.2| 1040|Drosophila melanogaster CG17922-P... 28 6.5
>AY119128-1|AAM50988.1| 684|Drosophila melanogaster RE31408p
protein.
Length = 684
Score = 178 bits (434), Expect = 3e-45
Identities = 92/175 (52%), Positives = 122/175 (69%), Gaps = 6/175 (3%)
Frame = +2
Query: 8 VNILNPPHVVLVHGEQNEMSRLKAALQREHRGK----IAVHTPRNTQQLCLTFRGDKTAK 175
+ +L P HVVLVHGEQNEMSRLK ALQRE+ I + PRNT + L FRG+KTAK
Sbjct: 412 IRLLKPTHVVLVHGEQNEMSRLKLALQREYEADASTDIKFYNPRNTHAVDLYFRGEKTAK 471
Query: 176 VMGSLALEAPEPGRVLQGVLVKRNFNYHILAPSDLHKYAELSQSEVTQRQSVQYAGSVPL 355
VMGSLA + E G L GVLVKR+F YH+LAPSDL KY ++S S VTQRQS+ + S+
Sbjct: 472 VMGSLAAKNSEVGSKLSGVLVKRDFKYHLLAPSDLGKYTDMSMSVVTQRQSIPWGSSLST 531
Query: 356 LRHVLMQL-AGTITFL-TETRWRLYSCIDLTLDNGIVTLEWNAQPVSDMYADALV 514
L +L ++ AG + L E + R++ CI+LT++ I+ +EW A V+D+YADA++
Sbjct: 532 LELLLDRIGAGCVEVLEAERKLRVFGCIELTVEQKIIVMEWQATHVNDVYADAVL 586
>AE014297-2556|AAF55578.2| 684|Drosophila melanogaster CG7698-PA
protein.
Length = 684
Score = 178 bits (434), Expect = 3e-45
Identities = 92/175 (52%), Positives = 122/175 (69%), Gaps = 6/175 (3%)
Frame = +2
Query: 8 VNILNPPHVVLVHGEQNEMSRLKAALQREHRGK----IAVHTPRNTQQLCLTFRGDKTAK 175
+ +L P HVVLVHGEQNEMSRLK ALQRE+ I + PRNT + L FRG+KTAK
Sbjct: 412 IRLLKPTHVVLVHGEQNEMSRLKLALQREYEADASTDIKFYNPRNTHAVDLYFRGEKTAK 471
Query: 176 VMGSLALEAPEPGRVLQGVLVKRNFNYHILAPSDLHKYAELSQSEVTQRQSVQYAGSVPL 355
VMGSLA + E G L GVLVKR+F YH+LAPSDL KY ++S S VTQRQS+ + S+
Sbjct: 472 VMGSLAAKNSEVGSKLSGVLVKRDFKYHLLAPSDLGKYTDMSMSVVTQRQSIPWGSSLST 531
Query: 356 LRHVLMQL-AGTITFL-TETRWRLYSCIDLTLDNGIVTLEWNAQPVSDMYADALV 514
L +L ++ AG + L E + R++ CI+LT++ I+ +EW A V+D+YADA++
Sbjct: 532 LELLLDRIGAGCVEVLEAERKLRVFGCIELTVEQKIIVMEWQATHVNDVYADAVL 586
>AJ277968-1|CAB96205.1| 1128|Drosophila melanogaster TRPgamma cation
channel long form protein.
Length = 1128
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 2 HEVNIL---NPPHVVLVHGEQNEMSRLKAALQREHRGKIAVHTPRNTQQL 142
HE+ IL +P V HGE+ ++RLK A++ + K H+ N QQL
Sbjct: 253 HELEILLNHDPTGPVYEHGERMHLNRLKLAIKLRQK-KFVAHS--NVQQL 299
>AJ277967-1|CAB96204.1| 1128|Drosophila melanogaster TRPgamma cation
channel short form protein.
Length = 1128
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 2 HEVNIL---NPPHVVLVHGEQNEMSRLKAALQREHRGKIAVHTPRNTQQL 142
HE+ IL +P V HGE+ ++RLK A++ + K H+ N QQL
Sbjct: 253 HELEILLNHDPTGPVYEHGERMHLNRLKLAIKLRQK-KFVAHS--NVQQL 299
>AF221101-1|AAF26743.1| 839|Drosophila melanogaster septin
interacting protein protein.
Length = 839
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Frame = +2
Query: 32 VVLVHGEQNEMSRLKAALQREHRGKIAVHTPRNTQQLCLTFRGDKTAKVMGSLALEAPEP 211
++ + ++ E S +AAL+ EHR + L ++ +++ + L P+
Sbjct: 360 IIAIDNQERECSSQQAALESEHRKLEEIVQLERNHIRTLEESLERVERLIDNPDLSLPQA 419
Query: 212 GRVLQGVLVKRNFNYHILAPSDLHK--YAELSQSEVTQRQSVQ 334
R+ + +LV +H +DL A L + E+ Q Q ++
Sbjct: 420 ERLFRELLVDYAAEFHEFGLADLAAGVIAPLLKRELVQWQPLE 462
>AF145670-1|AAD38645.1| 839|Drosophila melanogaster BcDNA.GH11690
protein.
Length = 839
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Frame = +2
Query: 32 VVLVHGEQNEMSRLKAALQREHRGKIAVHTPRNTQQLCLTFRGDKTAKVMGSLALEAPEP 211
++ + ++ E S +AAL+ EHR + L ++ +++ + L P+
Sbjct: 360 IIAIDNQERECSSQQAALESEHRKLEEIVQLERNHIRTLEESLERVERLIDNPDLSLPQA 419
Query: 212 GRVLQGVLVKRNFNYHILAPSDLHK--YAELSQSEVTQRQSVQ 334
R+ + +LV +H +DL A L + E+ Q Q ++
Sbjct: 420 ERLFRELLVDYAAEFHEFGLADLAAGVIAPLLKRELVQWQPLE 462
>AE014134-2741|AAN10950.1| 1128|Drosophila melanogaster CG5996-PB,
isoform B protein.
Length = 1128
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 2 HEVNIL---NPPHVVLVHGEQNEMSRLKAALQREHRGKIAVHTPRNTQQL 142
HE+ IL +P V HGE+ ++RLK A++ + K H+ N QQL
Sbjct: 253 HELEILLNHDPTGPVYEHGERMHLNRLKLAIKLRQK-KFVAHS--NVQQL 299
>AE014134-2740|AAF53548.2| 1128|Drosophila melanogaster CG5996-PA,
isoform A protein.
Length = 1128
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 2 HEVNIL---NPPHVVLVHGEQNEMSRLKAALQREHRGKIAVHTPRNTQQL 142
HE+ IL +P V HGE+ ++RLK A++ + K H+ N QQL
Sbjct: 253 HELEILLNHDPTGPVYEHGERMHLNRLKLAIKLRQK-KFVAHS--NVQQL 299
>AE014134-961|AAF52282.1| 839|Drosophila melanogaster CG7238-PA
protein.
Length = 839
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Frame = +2
Query: 32 VVLVHGEQNEMSRLKAALQREHRGKIAVHTPRNTQQLCLTFRGDKTAKVMGSLALEAPEP 211
++ + ++ E S +AAL+ EHR + L ++ +++ + L P+
Sbjct: 360 IIAIDNQERECSSQQAALESEHRKLEEIVQLERNHIRTLEESLERVERLIDNPDLSLPQA 419
Query: 212 GRVLQGVLVKRNFNYHILAPSDLHK--YAELSQSEVTQRQSVQ 334
R+ + +LV +H +DL A L + E+ Q Q ++
Sbjct: 420 ERLFRELLVDYAAEFHEFGLADLAAGVIAPLLKRELVQWQPLE 462
>BT001439-1|AAN71194.1| 1040|Drosophila melanogaster GH25102p
protein.
Length = 1040
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 20 NPPHVVLVHGEQNEMSRLKAALQREHRGKI-AVHTPRNTQQLCLTFRG 160
+PP +H RL A Q HRG++ TPR+ LC + G
Sbjct: 406 SPPPTKSLHPSPQHKVRLVPAGQSPHRGRLFEADTPRSNVWLCSSLCG 453
>AE013599-3262|AAF46757.2| 1040|Drosophila melanogaster CG17922-PA
protein.
Length = 1040
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 20 NPPHVVLVHGEQNEMSRLKAALQREHRGKI-AVHTPRNTQQLCLTFRG 160
+PP +H RL A Q HRG++ TPR+ LC + G
Sbjct: 406 SPPPTKSLHPSPQHKVRLVPAGQSPHRGRLFEADTPRSNVWLCSSLCG 453
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,575,478
Number of Sequences: 53049
Number of extensions: 289848
Number of successful extensions: 1051
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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