Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_N21
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X62570-1|CAA44450.1|  471|Homo sapiens IFP53 protein.                 221   2e-57
X59892-1|CAA42545.1|  471|Homo sapiens 471 aa polypeptide (gamma...   221   2e-57
M77804-1|AAA67324.1|  471|Homo sapiens transfer RNA-Trp syntheta...   221   2e-57
BC095453-1|AAH95453.1|  471|Homo sapiens WARS protein protein.        221   2e-57
BC017489-1|AAH17489.1|  471|Homo sapiens tryptophanyl-tRNA synth...   221   2e-57
M61715-1|AAA61298.1|  471|Homo sapiens transfer RNA-Trp syntheta...   220   4e-57
X67920-1|CAB94198.1|  140|Homo sapiens tryptophanyl-tRNA synthet...    86   1e-16
X67923-1|CAB94199.1|  290|Homo sapiens tryptophanyl-tRNA synthet...    75   3e-13

>X62570-1|CAA44450.1|  471|Homo sapiens IFP53 protein.
          Length = 471

 Score =  221 bits (540), Expect = 2e-57
 Identities = 97/142 (68%), Positives = 116/142 (81%)
 Frame = +3

Query: 219 PWNVAGKSETGIDYDKLIKRFGSQKIDEELIQRFEKVTGKKAHHFLRRGMFFSHRDLH*I 398
           PW V   S  GIDYDKLI RFGS KID+ELI R E+ TG++ HHFLRRG+FFSHRD++ +
Sbjct: 87  PWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQV 146

Query: 399 LNLYEAGKKFYLYTGRGPSSESMHIGHMIPFMFTKWLQEVFKVPLIIQLTDDEKALWKDI 578
           L+ YE  K FYLYTGRGPSSE+MH+GH+IPF+FTKWLQ+VF VPL+IQ+TDDEK LWKD+
Sbjct: 147 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDL 206

Query: 579 TVEDARPMAFNNAKDIIAVGFD 644
           T++ A   A  NAKDIIA GFD
Sbjct: 207 TLDQAYSYAVENAKDIIACGFD 228


>X59892-1|CAA42545.1|  471|Homo sapiens 471 aa polypeptide (gamma2)
           protein.
          Length = 471

 Score =  221 bits (540), Expect = 2e-57
 Identities = 97/142 (68%), Positives = 116/142 (81%)
 Frame = +3

Query: 219 PWNVAGKSETGIDYDKLIKRFGSQKIDEELIQRFEKVTGKKAHHFLRRGMFFSHRDLH*I 398
           PW V   S  GIDYDKLI RFGS KID+ELI R E+ TG++ HHFLRRG+FFSHRD++ +
Sbjct: 87  PWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQV 146

Query: 399 LNLYEAGKKFYLYTGRGPSSESMHIGHMIPFMFTKWLQEVFKVPLIIQLTDDEKALWKDI 578
           L+ YE  K FYLYTGRGPSSE+MH+GH+IPF+FTKWLQ+VF VPL+IQ+TDDEK LWKD+
Sbjct: 147 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDL 206

Query: 579 TVEDARPMAFNNAKDIIAVGFD 644
           T++ A   A  NAKDIIA GFD
Sbjct: 207 TLDQAYSYAVENAKDIIACGFD 228


>M77804-1|AAA67324.1|  471|Homo sapiens transfer RNA-Trp synthetase
           protein.
          Length = 471

 Score =  221 bits (540), Expect = 2e-57
 Identities = 97/142 (68%), Positives = 116/142 (81%)
 Frame = +3

Query: 219 PWNVAGKSETGIDYDKLIKRFGSQKIDEELIQRFEKVTGKKAHHFLRRGMFFSHRDLH*I 398
           PW V   S  GIDYDKLI RFGS KID+ELI R E+ TG++ HHFLRRG+FFSHRD++ +
Sbjct: 87  PWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQV 146

Query: 399 LNLYEAGKKFYLYTGRGPSSESMHIGHMIPFMFTKWLQEVFKVPLIIQLTDDEKALWKDI 578
           L+ YE  K FYLYTGRGPSSE+MH+GH+IPF+FTKWLQ+VF VPL+IQ+TDDEK LWKD+
Sbjct: 147 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDL 206

Query: 579 TVEDARPMAFNNAKDIIAVGFD 644
           T++ A   A  NAKDIIA GFD
Sbjct: 207 TLDQAYSYAVENAKDIIACGFD 228


>BC095453-1|AAH95453.1|  471|Homo sapiens WARS protein protein.
          Length = 471

 Score =  221 bits (540), Expect = 2e-57
 Identities = 97/142 (68%), Positives = 116/142 (81%)
 Frame = +3

Query: 219 PWNVAGKSETGIDYDKLIKRFGSQKIDEELIQRFEKVTGKKAHHFLRRGMFFSHRDLH*I 398
           PW V   S  GIDYDKLI RFGS KID+ELI R E+ TG++ HHFLRRG+FFSHRD++ +
Sbjct: 87  PWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQV 146

Query: 399 LNLYEAGKKFYLYTGRGPSSESMHIGHMIPFMFTKWLQEVFKVPLIIQLTDDEKALWKDI 578
           L+ YE  K FYLYTGRGPSSE+MH+GH+IPF+FTKWLQ+VF VPL+IQ+TDDEK LWKD+
Sbjct: 147 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDL 206

Query: 579 TVEDARPMAFNNAKDIIAVGFD 644
           T++ A   A  NAKDIIA GFD
Sbjct: 207 TLDQAYSYAVENAKDIIACGFD 228


>BC017489-1|AAH17489.1|  471|Homo sapiens tryptophanyl-tRNA
           synthetase protein.
          Length = 471

 Score =  221 bits (540), Expect = 2e-57
 Identities = 97/142 (68%), Positives = 116/142 (81%)
 Frame = +3

Query: 219 PWNVAGKSETGIDYDKLIKRFGSQKIDEELIQRFEKVTGKKAHHFLRRGMFFSHRDLH*I 398
           PW V   S  GIDYDKLI RFGS KID+ELI R E+ TG++ HHFLRRG+FFSHRD++ +
Sbjct: 87  PWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQV 146

Query: 399 LNLYEAGKKFYLYTGRGPSSESMHIGHMIPFMFTKWLQEVFKVPLIIQLTDDEKALWKDI 578
           L+ YE  K FYLYTGRGPSSE+MH+GH+IPF+FTKWLQ+VF VPL+IQ+TDDEK LWKD+
Sbjct: 147 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDL 206

Query: 579 TVEDARPMAFNNAKDIIAVGFD 644
           T++ A   A  NAKDIIA GFD
Sbjct: 207 TLDQAYSYAVENAKDIIACGFD 228


>M61715-1|AAA61298.1|  471|Homo sapiens transfer RNA-Trp synthetase
           protein.
          Length = 471

 Score =  220 bits (537), Expect = 4e-57
 Identities = 97/142 (68%), Positives = 116/142 (81%)
 Frame = +3

Query: 219 PWNVAGKSETGIDYDKLIKRFGSQKIDEELIQRFEKVTGKKAHHFLRRGMFFSHRDLH*I 398
           PW V   S  GIDYDKLI RFGS KID+ELI R E+ TG++ HHFLRRG+FFSHRD++ +
Sbjct: 87  PWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQV 146

Query: 399 LNLYEAGKKFYLYTGRGPSSESMHIGHMIPFMFTKWLQEVFKVPLIIQLTDDEKALWKDI 578
           L+ YE  K FYLYTGRGPSSE+MH+GH+IPF+FTKWLQ+VF VPL+IQ+TDDEK LWKD+
Sbjct: 147 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDL 206

Query: 579 TVEDARPMAFNNAKDIIAVGFD 644
           T++ A   A  NAKDIIA GFD
Sbjct: 207 TLDQAYGDAVENAKDIIACGFD 228


>X67920-1|CAB94198.1|  140|Homo sapiens tryptophanyl-tRNA synthetase
           protein.
          Length = 140

 Score = 85.8 bits (203), Expect = 1e-16
 Identities = 37/54 (68%), Positives = 42/54 (77%)
 Frame = +3

Query: 219 PWNVAGKSETGIDYDKLIKRFGSQKIDEELIQRFEKVTGKKAHHFLRRGMFFSH 380
           PW V   S  GIDYDKLI RFGS KID+ELI R E+ TG++ HHFLRRG+FFSH
Sbjct: 87  PWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSH 140


>X67923-1|CAB94199.1|  290|Homo sapiens tryptophanyl-tRNA synthetase
           protein.
          Length = 290

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 32/47 (68%), Positives = 38/47 (80%)
 Frame = +3

Query: 504 WLQEVFKVPLIIQLTDDEKALWKDITVEDARPMAFNNAKDIIAVGFD 644
           WLQ+VF VPL+IQ+TDDEK LWKD+T++ A   A  NAKDIIA GFD
Sbjct: 1   WLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFD 47


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,547,624
Number of Sequences: 237096
Number of extensions: 1680981
Number of successful extensions: 2492
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2491
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)