Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_N18
         (590 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...    90   2e-18
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...    90   2e-18
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...    88   7e-18
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...    84   2e-16
Y10229-1|CAA71278.1|  784|Drosophila melanogaster RAD54 protein.       29   3.6  
AY069599-1|AAL39744.2|  788|Drosophila melanogaster LD35220p pro...    29   3.6  
AF069779-1|AAC24577.1|  784|Drosophila melanogaster Rad54 homolo...    29   3.6  
AE014134-530|AAF51168.1|  784|Drosophila melanogaster CG3736-PA ...    29   3.6  

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 39/56 (69%), Positives = 45/56 (80%)
 Frame = +2

Query: 422 ALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNI 589
           A K Q+K++KG  G R RKIRT+VHFRRP T + PR PKYPRKS+P RNRMDAYNI
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNI 189


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 39/56 (69%), Positives = 45/56 (80%)
 Frame = +2

Query: 422 ALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNI 589
           A K Q+K++KG  G R RKIRT+VHFRRP T + PR PKYPRKS+P RNRMDAYNI
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNI 197


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score = 88.2 bits (209), Expect = 7e-18
 Identities = 38/56 (67%), Positives = 44/56 (78%)
 Frame = +2

Query: 422 ALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNI 589
           A K Q+K++KG  G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNI
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNI 197


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 38/56 (67%), Positives = 44/56 (78%)
 Frame = +2

Query: 422 ALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNI 589
           A K Q+K++K   G R RKIRT+VHFRRP T + PR PKYPRKS+P RNRMDAYNI
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNI 189


>Y10229-1|CAA71278.1|  784|Drosophila melanogaster RAD54 protein.
          Length = 784

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -3

Query: 570 RFRLGSDFLGYFGCLGGSKVLGLRKCTEVRILRTLLPCSPLTTF 439
           +F++  D   Y    GG +VLG+R+C   R L   + C+ L  F
Sbjct: 83  KFKVPMD--NYVPDYGGKRVLGVRRCISRRPLHDPMACNALVLF 124


>AY069599-1|AAL39744.2|  788|Drosophila melanogaster LD35220p
           protein.
          Length = 788

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -3

Query: 570 RFRLGSDFLGYFGCLGGSKVLGLRKCTEVRILRTLLPCSPLTTF 439
           +F++  D   Y    GG +VLG+R+C   R L   + C+ L  F
Sbjct: 87  KFKVPMD--NYVPDYGGKRVLGVRRCISRRPLHDPMACNALVLF 128


>AF069779-1|AAC24577.1|  784|Drosophila melanogaster Rad54 homolog
           OKR protein.
          Length = 784

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -3

Query: 570 RFRLGSDFLGYFGCLGGSKVLGLRKCTEVRILRTLLPCSPLTTF 439
           +F++  D   Y    GG +VLG+R+C   R L   + C+ L  F
Sbjct: 83  KFKVPMD--NYVPDYGGKRVLGVRRCISRRPLHDPMACNALVLF 124


>AE014134-530|AAF51168.1|  784|Drosophila melanogaster CG3736-PA
           protein.
          Length = 784

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -3

Query: 570 RFRLGSDFLGYFGCLGGSKVLGLRKCTEVRILRTLLPCSPLTTF 439
           +F++  D   Y    GG +VLG+R+C   R L   + C+ L  F
Sbjct: 83  KFKVPMD--NYVPDYGGKRVLGVRRCISRRPLHDPMACNALVLF 124


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,665,369
Number of Sequences: 53049
Number of extensions: 255086
Number of successful extensions: 663
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)