Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_N17
         (495 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         24   1.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.1  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   7.2  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    21   9.5  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    21   9.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   9.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   9.5  

>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 370 HRR*NISVRTCRSSWLAIKRTCVMIRPLS 456
           HRR    V + +S WL+I  +   IR L+
Sbjct: 59  HRRVTCDVLSWQSKWLSINHSACAIRCLA 87


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 279 AACRSPLGRPYPTALVPPVSHP 214
           +AC SP   P     +PP  HP
Sbjct: 297 SACHSPGVYPSTAGFLPPSYHP 318


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 213 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVIL 314
           V G  +E   W+ A +E  D LR    PD  +++
Sbjct: 542 VAGYPIEEIKWERANRELPDDLRQKVLPDGTLVI 575


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 213 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVIL 314
           V G  +E   W+ A +E  D LR    PD  +++
Sbjct: 542 VAGYPIEEIKWERANRELPDDLRQKVLPDGTLVI 575


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 324 SVDSPDSLENIPEKWTPEVKHFCPNVPIILV 416
           S+  P S +N+P+    +     P +P+I V
Sbjct: 763 SIPPPPSAQNVPQNTNSQAIPRIPILPMIPV 793


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 336 PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 434
           PD+LEN     + + K     V   L+ NK ++
Sbjct: 68  PDALENECSPCSEKQKKIADKVVQFLIDNKPEI 100


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 336 PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 434
           PD+LEN     + + K     V   L+ NK ++
Sbjct: 68  PDALENECSPCSEKQKKIADKVVQFLIDNKPEI 100


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 138 IVFSKDQFPEVYVPTVFENYVADIEVD 218
           I F    + EVY   +++  VAD+  D
Sbjct: 427 ITFQYTDWEEVYNGYIYQKMVADVVGD 453


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 138 IVFSKDQFPEVYVPTVFENYVADIEVD 218
           I F    + EVY   +++  VAD+  D
Sbjct: 427 ITFQYTDWEEVYNGYIYQKMVADVVGD 453


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,540
Number of Sequences: 438
Number of extensions: 2916
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)