Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_N14
         (522 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069348-1|AAL39493.1|  346|Drosophila melanogaster LD05623p pro...    31   1.3  
AE013599-15|EAA45984.1|  346|Drosophila melanogaster CG40293-PA,...    31   1.3  
AY060352-1|AAL25391.1|   75|Drosophila melanogaster GH28038p pro...    28   8.8  

>AY069348-1|AAL39493.1|  346|Drosophila melanogaster LD05623p
           protein.
          Length = 346

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +3

Query: 57  INLILLCYVYKKYIYIRNKFI 119
           IN I+ C++YK+Y+Y+  KF+
Sbjct: 67  INTIVSCFLYKQYVYLTYKFM 87


>AE013599-15|EAA45984.1|  346|Drosophila melanogaster CG40293-PA,
           isoform A protein.
          Length = 346

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +3

Query: 57  INLILLCYVYKKYIYIRNKFI 119
           IN I+ C++YK+Y+Y+  KF+
Sbjct: 67  INTIVSCFLYKQYVYLTYKFM 87


>AY060352-1|AAL25391.1|   75|Drosophila melanogaster GH28038p
           protein.
          Length = 75

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +3

Query: 48  KYFINLILLCYVYKKYIYIRNKFIFDS*SVTCE*R*KKTVCSVKILRRY 194
           K  +N I+  Y Y  Y+++ N +I  S S+  E     +V  +++L RY
Sbjct: 16  KRSLNHIISAYSYNPYLFLFNPYIIRSISIPTEESYILSVQYIRLLLRY 64


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,101,691
Number of Sequences: 53049
Number of extensions: 512387
Number of successful extensions: 1101
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)