Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_N14
         (522 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    25   0.47 
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            22   3.3  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   4.4  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   7.7  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   7.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   7.7  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = -2

Query: 515 HVADVESDQSLYPILLDITTEAHVSR*VGTPYVAHTPNALRLIDEICYIAEDFICAQVVR 336
           HV D+ +   L  +++      + S   G   V+    A+  ++ I Y+A+D   A +V 
Sbjct: 159 HVFDLNTSHQLKQVVMPHDIAVNASTGNGG-LVSLVVQAMDPVNTIVYMADDKGDALIVY 217

Query: 335 QNSD 324
           QNSD
Sbjct: 218 QNSD 221


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +3

Query: 279 MWVIQ-DLPPEDHDEAIRILTDHLCT 353
           +W +   + P+DH+ +I     HLCT
Sbjct: 22  IWALDCSIKPKDHNGSIYWSMYHLCT 47


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 324 IRILTDHLCTDEVLCNITN 380
           I+I+TD L ++E+   +TN
Sbjct: 499 IKIITDQLKSEELNAKVTN 517


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 146 FARYASRIKNKFISYINILFIYV 78
           F+  +S     FISY  + FIYV
Sbjct: 117 FSTCSSHPTAAFISYGTLFFIYV 139


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 146 FARYASRIKNKFISYINILFIYV 78
           F+  +S     FISY  + FIYV
Sbjct: 116 FSTCSSHPTAAFISYGTLFFIYV 138


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +3

Query: 288 IQDLPPEDHDEAIRILTDHLCTDEVLCNITN---LIDEP 395
           I+D+ PED  +  +  T H  T E   + T    +I EP
Sbjct: 167 IRDVGPEDGYKTYQCRTKHRLTGETRLSATKGRLVITEP 205


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 182 NFNRTHGF 159
           N NRTHGF
Sbjct: 226 NLNRTHGF 233


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,021
Number of Sequences: 438
Number of extensions: 3230
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)