Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_N12
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ... 30 1.0
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 30 1.0
Z81135-3|CAB03456.1| 251|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 30 1.3
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 30 1.3
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ... 30 1.3
Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical p... 29 3.1
Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL021346-1|CAA16154.1| 823|Caenorhabditis elegans Hypothetical ... 28 4.1
Z93388-11|CAB07660.2| 319|Caenorhabditis elegans Hypothetical p... 27 9.5
>AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
protein F33H12.6 protein.
Length = 1360
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 245 EEKAVEN-YEILVVPDKKIVSINKIQTPQRAGVAFVHPVVYSPPLDEESDNASADNYGDD 421
+ K VE + ++ P N I TP+ VA ++ V++ + EE S D +
Sbjct: 1137 DHKIVEEVFGAVIDPTTSDPCDNVILTPKNVDVAQLNDDVHNRMVGEERIYLSRDEVIVE 1196
Query: 422 YDEDEFNYPNEFI 460
+ D +YP EF+
Sbjct: 1197 HQADTMHYPTEFL 1209
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 260 ENYEILVVPDKKIVSINKIQTPQRAGVAFVHPVVYSPPLDEESDNASADNYGDDYDEDEF 439
E + ++ P N I TP+ VA ++ V++ + EE S D ++ D
Sbjct: 1269 EVFGAVIDPTTSYPCDNVILTPKNVDVAQLNDDVHNRMVGEERIYLSRDEVIVEHQADTM 1328
Query: 440 NYPNEFI 460
+YP EF+
Sbjct: 1329 HYPTEFL 1335
>Z81135-3|CAB03456.1| 251|Caenorhabditis elegans Hypothetical
protein W01G7.4 protein.
Length = 251
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 368 PPLDEESDNASADNYGDDYDEDE 436
PP D+E D+ DN+ +DY ++E
Sbjct: 169 PPADDEDDSNDEDNWRNDYPDEE 191
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 308 NKIQTPQRAGVAFVHPVVYSPPLDEESDNASADNYGDDYDEDEFNYPNEFI 460
N I TP+ VA ++ V++ + EE S D ++ D +YP EF+
Sbjct: 1265 NVILTPKNVDVAQLNDDVHNRMVGEERIYLSRDEVIVEHQADTMHYPTEFL 1315
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 308 NKIQTPQRAGVAFVHPVVYSPPLDEESDNASADNYGDDYDEDEFNYPNEFI 460
N I TP+ VA ++ V++ + EE S D ++ D +YP EF+
Sbjct: 1265 NVILTPKNVDVAQLNDDVHNRMVGEERIYLSRDEVIVEHQADTMHYPTEFL 1315
>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
protein Y46B2A.2 protein.
Length = 1365
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 308 NKIQTPQRAGVAFVHPVVYSPPLDEESDNASADNYGDDYDEDEFNYPNEFI 460
N I TP+ VA ++ V++ + EE S D ++ D +YP EF+
Sbjct: 1164 NVILTPKNVDVAQLNDDVHNRMVGEERIYLSRDEVIVEHQADTMHYPTEFL 1214
>Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 499 CTFFCYYIHLFSYFKKRAFSIYNLN 573
CT F Y+ + YF K++ ++NLN
Sbjct: 807 CTSFMYFGDVLEYFNKQSAKMFNLN 831
>Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 499 CTFFCYYIHLFSYFKKRAFSIYNLN 573
CT F Y+ + YF K++ ++NLN
Sbjct: 807 CTSFMYFGDVLEYFNKQSAKMFNLN 831
>AL021346-1|CAA16154.1| 823|Caenorhabditis elegans Hypothetical
protein H37A05.1 protein.
Length = 823
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 209 PSHNVCYIHCGNEEKAVENYEILVVPDKKIVSIN---KIQTPQRAGVAFVHPVVYSPPLD 379
PS N Y GN V +YE + VP +I+ I+ K++ +G+A + + S +D
Sbjct: 669 PSGNPFYAGFGNRITDVVSYEAVAVPAARILIIDPSGKVKRSDSSGLALSYKSMASDTVD 728
>Z93388-11|CAB07660.2| 319|Caenorhabditis elegans Hypothetical
protein T10C6.3 protein.
Length = 319
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 454 IYLNLIIIPGSKLCVCTFFCYYIHLFSYFKKRAFSIYN 567
I ++ +++ ++ C C F Y +LFS R F ++N
Sbjct: 108 ILISFLLMSFNRFCACFFPLRYQNLFSSSMIRTFIVFN 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,731,920
Number of Sequences: 27780
Number of extensions: 288244
Number of successful extensions: 954
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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