Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_N10
(365 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 155 1e-38
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 153 5e-38
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 33 0.069
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 31 0.28
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 29 0.85
02_05_1227 - 35076047-35076217,35076737-35076797,35077038-350771... 29 1.1
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 29 1.1
02_04_0407 + 22645775-22645865,22645998-22646269 29 1.5
12_01_1092 - 11362094-11362367,11362739-11362795,11363256-113636... 28 2.0
09_02_0084 + 4106803-4106851,4108165-4108460 28 2.0
08_02_0101 + 12374476-12376683 28 2.0
06_03_0493 + 21402536-21404599 28 2.6
11_06_0013 - 19252779-19252805,19252947-19253090,19253572-192536... 27 4.5
08_01_0883 + 8672020-8672193,8672343-8672458,8672604-8672756,867... 27 6.0
07_03_0944 + 22787933-22789906 27 6.0
05_03_0074 + 8095355-8096575,8096664-8096901,8096990-8097667,809... 27 6.0
04_03_0183 + 12352147-12352179,12352390-12353349,12353815-123539... 27 6.0
09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,255... 26 7.9
06_01_0828 + 6250860-6250992,6251082-6251211,6251284-6251989 26 7.9
04_04_0753 - 27797298-27797547,27797765-27797951,27798040-277981... 26 7.9
04_01_0511 + 6678765-6678801,6678904-6679923,6680012-6680718 26 7.9
02_05_1037 + 33682048-33682188,33682317-33682358,33683143-336833... 26 7.9
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 155 bits (375), Expect = 1e-38
Identities = 75/118 (63%), Positives = 89/118 (75%)
Frame = +3
Query: 12 DVDVEVPANPVLSGGAMDVNTALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAEN 191
+ VE PA PVL G MD+ TALQ V+K + H GLV GL EAAKA++K A LCVLAE+
Sbjct: 4 ETPVETPAAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 192 CDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKD 365
CD+ Y KLV+ALC EH + LV V + K LGEWAGLCKID +GKARK+VGCSCVV+KD
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKD 120
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 153 bits (370), Expect = 5e-38
Identities = 74/118 (62%), Positives = 88/118 (74%)
Frame = +3
Query: 12 DVDVEVPANPVLSGGAMDVNTALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAEN 191
+ VE P PVL G MD+ TALQ V+K + H GLV GL EAAKA++K A LCVLAE+
Sbjct: 4 ETPVEAPPAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 192 CDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKD 365
CD+ Y KLV+ALC EH + LV V + K LGEWAGLCKID +GKARK+VGCSCVV+KD
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKD 120
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 33.1 bits (72), Expect = 0.069
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +3
Query: 117 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 296
L G+ E K++ + Q LC++A N V LC E IP V V + + L AG
Sbjct: 45 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLAT-AG 103
Query: 297 LCK 305
K
Sbjct: 104 TTK 106
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 31.1 bits (67), Expect = 0.28
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +3
Query: 117 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 296
L G+ E K++ + LCV+A N V LC E IP + V + + L AG
Sbjct: 45 LKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDLAT-AG 103
Query: 297 LCK 305
K
Sbjct: 104 TTK 106
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 29.5 bits (63), Expect = 0.85
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +3
Query: 123 HGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 284
+GL+ +++ +A L V+A + D + ALC + ++P V +LG
Sbjct: 130 YGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLG 183
>02_05_1227 -
35076047-35076217,35076737-35076797,35077038-35077123,
35077213-35077301,35077685-35077766,35078094-35078136,
35078211-35078284,35078492-35078561,35078747-35078816,
35079275-35079369,35079473-35079549,35080725-35080760
Length = 317
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 326 SLAVFVDFTETGPFAELLIVIDLNKWDLMFITE 228
S+ F+D ET P A+ L + DL D++F++E
Sbjct: 186 SMIYFIDDVETSPAAQNLALRDLPLRDILFLSE 218
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 123 HGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 284
+GL +++ +A L V+A + D + ALC + +IP V +LG
Sbjct: 115 YGLDHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLG 168
>02_04_0407 + 22645775-22645865,22645998-22646269
Length = 120
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = +2
Query: 38 PRAERWCY-GCEHSTPGSS*NGPYPRWISAWTSRGCQGFGQEASCPMC 178
PR + Y G + PG G YP W C G+G C C
Sbjct: 54 PRGGGYGYPGRGYGYPGRGGGGGYPGGGGGWHGCRCCGYGYRGGCRCC 101
>12_01_1092 -
11362094-11362367,11362739-11362795,11363256-11363683,
11364350-11365462
Length = 623
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 183 AENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 284
A CDE +K + +CN + L + D+N +G
Sbjct: 316 AFKCDEYTVRKCSKVICNRSKNSLYRFDSNASIG 349
>09_02_0084 + 4106803-4106851,4108165-4108460
Length = 114
Score = 28.3 bits (60), Expect = 2.0
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = +3
Query: 63 DVNTALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEH 242
D+ A +L A+ GL +A + DK Q L +N EAA K QAL
Sbjct: 42 DIANAAAPILN-AIFQNGLGSSFDDAVELFDKLQCALDKYYKNIAEAATKWASQALAMTK 100
Query: 243 QIPLVKVDNN 272
+ +K +N
Sbjct: 101 TLNQLKFCSN 110
>08_02_0101 + 12374476-12376683
Length = 735
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 78 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENC--DEAAYKKLVQALC 233
L+ L+TA + L+HGL A + + + A++C D Y +V LC
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLC 188
>06_03_0493 + 21402536-21404599
Length = 687
Score = 27.9 bits (59), Expect = 2.6
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 84 EVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVK 260
E+L T LIHG ++ E A L + D + Y L+Q LCN H++ K
Sbjct: 398 ELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL---ELDISLYGALIQGLCNVHKLDEAK 453
>11_06_0013 -
19252779-19252805,19252947-19253090,19253572-19253663,
19253757-19253835,19253965-19254031,19254163-19254254,
19254986-19255102,19255254-19255365,19255479-19255594,
19255680-19255756,19255912-19255993,19256077-19256214,
19258806-19259009
Length = 448
Score = 27.1 bits (57), Expect = 4.5
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 102 LIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKL 281
++ GG HG+HE +D R+ L + + A LV ALC +I L +V + +
Sbjct: 139 ILQGGFFHGIHELTYGVDIRKIRLMGVLQ---RIAIAYLVVALC---EIWLRRVSSGGNI 192
Query: 282 G 284
G
Sbjct: 193 G 193
>08_01_0883 +
8672020-8672193,8672343-8672458,8672604-8672756,
8672868-8673195,8673250-8673480,8673567-8673707,
8673805-8674002,8674467-8674754
Length = 542
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 211 KSLFRLSVMNIKSHLLR--SITIRSSANGPVSVKSTKTARLGKSSVAL 348
+S F + + + KSH+L + S ++ P+SVKS++ + LG +S L
Sbjct: 76 ESEFDIYLRDDKSHVLYHPEFSSTSVSSSPLSVKSSERSDLGTASAVL 123
>07_03_0944 + 22787933-22789906
Length = 657
Score = 26.6 bits (56), Expect = 6.0
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 21 VEVPANPVLSGGAMDVNTALQEVLKTALI---HGGLVHGLHEAAKALD 155
V VP+ P L+GG D AL E+ + G L G EAA+ D
Sbjct: 8 VVVPSQPPLAGGRRDRLAALLELAAADDVDGLRGALAEGGEEAAELAD 55
>05_03_0074 +
8095355-8096575,8096664-8096901,8096990-8097667,
8097787-8097974
Length = 774
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 138 AAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKK 278
A L+ +A L VL E+C + V + C +H++ +V +D K
Sbjct: 570 AMDLLEFTKAELDVLREDCGWKEFLGKVTSFCVKHKVKVVDMDGKYK 616
>04_03_0183 +
12352147-12352179,12352390-12353349,12353815-12353998,
12354087-12354799
Length = 629
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 138 AAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKK 278
A L+ +A L VL E+C + V + C +H++ +V +D K
Sbjct: 475 AMDLLEFTKAELDVLREDCGWKEFLGKVTSFCVKHKVKVVDMDGKYK 521
>09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,
2550893-2550988,2551418-2551482,2551558-2551591,
2552469-2552540,2552567-2552644,2553416-2553477,
2554267-2554530,2555057-2555246,2555432-2555500,
2555613-2555669,2555746-2555846,2556029-2556146,
2556225-2556272,2556362-2556487,2556960-2557118,
2558119-2558216,2558324-2558416,2559741-2559937,
2560231-2560354,2561121-2561334,2561773-2561830,
2561955-2562433
Length = 1022
Score = 26.2 bits (55), Expect = 7.9
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +3
Query: 45 LSGGAMDVNT-ALQEVLKTALIHGGLVHGLHEAAKALDKRQA--VLCVLAENCDEAAYKK 215
L G M+ N AL V+ T + G + + +D +A + ++ +C+ Y +
Sbjct: 881 LIGLFMEFNLKALMGVIITTFLGAGTYMFRIDDERVIDATRAGSIAHLINHSCEPNCYSR 940
Query: 216 LVQALCNEHQIPLVKVDNN 272
++ L +EH I K D N
Sbjct: 941 VISVLGDEHIIIFAKRDIN 959
>06_01_0828 + 6250860-6250992,6251082-6251211,6251284-6251989
Length = 322
Score = 26.2 bits (55), Expect = 7.9
Identities = 18/71 (25%), Positives = 26/71 (36%)
Frame = +3
Query: 81 QEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVK 260
QE+ KT L +V+G + D ++ EN VQ CN P
Sbjct: 239 QEIGKTNLFSNNIVNGNEWCSMEADNSSQKSLLVPENSIPPLIDMPVQNFCNTISTPNCD 298
Query: 261 VDNNKKLGEWA 293
N+ L W+
Sbjct: 299 GGNSIPLPSWS 309
>04_04_0753 -
27797298-27797547,27797765-27797951,27798040-27798113,
27798719-27798949,27799047-27799133,27799244-27799434
Length = 339
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 111 GGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKK 215
GGL+ G+ AAKA++ +L + D++A K
Sbjct: 196 GGLISGVALAAKAINPSIRILAAEPKGADDSAQSK 230
>04_01_0511 + 6678765-6678801,6678904-6679923,6680012-6680718
Length = 587
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 138 AAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKK 278
A L+ +A L VL E+C + V + C +H++ +V +D K
Sbjct: 436 AMDLLEFTKAELDVLREDCGCKEFLGKVTSFCVKHKVKVVDMDGKYK 482
>02_05_1037 +
33682048-33682188,33682317-33682358,33683143-33683328,
33684442-33684657,33684803-33684949,33685525-33685866,
33687257-33687361
Length = 392
Score = 26.2 bits (55), Expect = 7.9
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 222 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 353
QA N ++ P VK D+N W + + K GK I SCV
Sbjct: 137 QASINVYE-PKVKQDSNDLSASWIQIGSVPKVGKGVGIGAGSCV 179
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,310,425
Number of Sequences: 37544
Number of extensions: 208576
Number of successful extensions: 633
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 564709324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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