Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_N10
         (365 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    24   0.65 
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   4.6  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    20   8.0  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    20   8.0  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    20   8.0  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    20   8.0  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.8 bits (49), Expect = 0.65
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +3

Query: 213 KLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARK--IVGCSCV 353
           KL+  +  E    L +VD  + LGE   L   D   K +K  + GC CV
Sbjct: 564 KLIDNIKKEIYDILPEVDVEEILGEAKVLQNFDIKDKNKKVNVAGCRCV 612


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -2

Query: 352 TQEQPTIFLALPSL 311
           T++Q T+F+A+P +
Sbjct: 67  TEQQSTVFVAIPRI 80


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
          precursor protein.
          Length = 223

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 53 WCYGCEHSTPGS 88
          W   C HS PG+
Sbjct: 12 WFIACTHSFPGA 23


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 129 LHEAAKALDKRQAVLC 176
           +H+A K L++R   LC
Sbjct: 79  IHDAYKDLNQRYGALC 94


>AY939856-1|AAX33236.1|  223|Apis mellifera venom
          carbohydrate-rich protein precursor protein.
          Length = 223

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 53 WCYGCEHSTPGS 88
          W   C HS PG+
Sbjct: 12 WFIACTHSFPGA 23


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2
          protein.
          Length = 223

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 53 WCYGCEHSTPGS 88
          W   C HS PG+
Sbjct: 12 WFIACTHSFPGA 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,528
Number of Sequences: 438
Number of extensions: 1932
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)