Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_N06
         (408 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   4.1  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   4.1  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   5.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   5.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   5.4  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 207 ENIVDAVKKDLTPQSICHVSGQ 272
           E++V+  KK++T    C V+ Q
Sbjct: 109 ESVVETCKKEVTSTEGCEVAWQ 130


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 207 ENIVDAVKKDLTPQSICHVSGQ 272
           E++V+  KK++T    C V+ Q
Sbjct: 83  ESVVETCKKEVTSTEGCEVAWQ 104


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 280 WVHCPLTWQML*GVR 236
           W HCP  ++ + G+R
Sbjct: 473 WHHCPEIYKAIEGIR 487


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 81  QFLDSCYSRRH 49
           QFL  C SRRH
Sbjct: 341 QFLQVCRSRRH 351


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 153 DIPSINRLRNLHKAFGQTFS 94
           D+P +    + H++FG  FS
Sbjct: 351 DLPGVGENLHNHQSFGMDFS 370


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,328
Number of Sequences: 438
Number of extensions: 2087
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)