Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_N05
         (194 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   1.8  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    20   2.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    19   5.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    19   5.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    19   7.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    19   7.1  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    18   9.4  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    18   9.4  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    18   9.4  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    18   9.4  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 106 FVYNLLSYLFFAATTLAPFSILFGVL 29
           +VY L   L++ +TT+ P  IL+ V+
Sbjct: 296 WVYPLTGCLYYFSTTINP--ILYNVM 319


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 60  LRHFQYCSECWCALDG 13
           L H+ +C E + A++G
Sbjct: 470 LHHWHHCPEIYKAIEG 485


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
          protein MRJP2 protein.
          Length = 452

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 24 RTNTPNNIENGARVV 68
          R N+P N+E    V+
Sbjct: 21 RENSPRNLEKSLNVI 35


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 81  YFLRQLPLRHFQ 46
           YF R +P  H+Q
Sbjct: 256 YFTRTIPSDHYQ 267


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 140 FSLKILN*IFYTQKKKKK 193
           F+  +L+ +  TQKKK+K
Sbjct: 233 FTKHMLDVVSGTQKKKRK 250


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 140 FSLKILN*IFYTQKKKKK 193
           F+  +L+ +  TQKKK+K
Sbjct: 248 FTKHMLDVVSGTQKKKRK 265


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 114 CINLYIIY*VIYFLRQLPLRHFQYC 40
           C N   +Y  I ++ Q+P+    YC
Sbjct: 101 CNNYKKLYYNINYIEQIPIPVPIYC 125


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 114 CINLYIIY*VIYFLRQLPLRHFQYC 40
           C N   +Y  I ++ Q+P+    YC
Sbjct: 101 CNNYKKLYYNINYIEQIPIPVPIYC 125


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 114 CINLYIIY*VIYFLRQLPLRHFQYC 40
           C N   +Y  I ++ Q+P+    YC
Sbjct: 101 CNNYRKLYYNINYIEQIPIPVPIYC 125


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 113 QSCEIKWVSFS 145
           Q C +KW S++
Sbjct: 143 QRCVLKWASWT 153


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,908
Number of Sequences: 438
Number of extensions: 747
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used:  2541420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)