Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_N02
(533 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 28 1.0
SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase... 27 1.8
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 27 2.3
SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyce... 26 4.1
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 26 4.1
SPBP35G2.07 |ilv1||acetolactate synthase catalytic subunit|Schiz... 26 4.1
SPCC584.13 |||amino acid permease, unknown 14|Schizosaccharomyce... 25 5.4
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 25 5.4
SPAC22A12.16 |||ATP-citrate synthase subunit 2 |Schizosaccharomy... 25 7.1
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 25 7.1
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 25 7.1
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.4
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 25 9.4
SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 25 9.4
SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces po... 25 9.4
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 9.4
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 25 9.4
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 25 9.4
SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase |Schizosaccharom... 25 9.4
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 27.9 bits (59), Expect = 1.0
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +1
Query: 238 PSGLAFDLDKQTCDWKGKVNNCDKLEKPRKILPILKTDEPICPEGKLACGSGDCIE 405
PSG+ ++ K T W G N + R I + + E C GK+ G +E
Sbjct: 573 PSGVCLEIKKGTFSWSGPGQNAAE-PTLRDIDFVARRGELCCIVGKVGMGKSSLLE 627
>SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 444
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 190 RDVVRCTRSGLKQITCPSGLAFDLDKQTCDWKGKVNN 300
R++ +CT S Q CPS LA LDK + KV++
Sbjct: 142 RELQKCTASYYHQNACPSSLA--LDKSISEAFAKVDH 176
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 26.6 bits (56), Expect = 2.3
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3
Query: 357 GLVGFQDGQDFSRLLQFVTVVDFTLPVAG 271
G++G + G +SRL VTVV+F LP G
Sbjct: 226 GIIGLEMGSVWSRLGAEVTVVEF-LPAVG 253
>SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 663
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 454 RLIHLYNQVCRYKTVPFQCSHHS 386
R+ LYN + T PF C H+
Sbjct: 603 RVTKLYNSYIEFSTTPFDCYGHN 625
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 25.8 bits (54), Expect = 4.1
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = -1
Query: 338 MGKIFLGFSSLSQLLTLPFQSQVCLSRSNASPD-----GQVICLRPDLVHLTTSLQSPSV 174
MG F S ++ P + CL+ +A+PD Q + L + L T SP +
Sbjct: 217 MGLYFDNVGWSSHIIHRPSFEEACLNLYSAAPDRTNPQPQFLSLTYMVFCLGTLFTSPVL 276
Query: 173 LRRKYSSA 150
+R +YS A
Sbjct: 277 VRNRYSLA 284
>SPBP35G2.07 |ilv1||acetolactate synthase catalytic
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 669
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 208 TRSGLKQITCPSGLAFDLDKQTCDWKGKV 294
TRS ++ P + +LDKQT D K KV
Sbjct: 461 TRSAPGELVKPQEVIQELDKQTSDIKDKV 489
>SPCC584.13 |||amino acid permease, unknown 14|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 544
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = +2
Query: 155 TNISVSAPKAIVEMSS--GALGQVLNRSLA 238
+N SV+AP+AIV S+ G +G +LN +A
Sbjct: 271 SNASVAAPRAIVMTSAFGGIVGWLLNLCIA 300
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 386 PQASFPSGQMGSSVFKMGKIFLGFSS 309
P FP G S F MG F GF+S
Sbjct: 447 PGGGFPGGSYNSQGFGMGGGFPGFTS 472
>SPAC22A12.16 |||ATP-citrate synthase subunit 2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 419 VTANLIVQMNQTKMPAPSMSIPTEHRT 499
V+A VQ+ Q + P P++ IP E T
Sbjct: 33 VSATPAVQLAQIQFPLPTLVIPAESTT 59
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 25.0 bits (52), Expect = 7.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 503 SQSGALLGSTSTVQAFSSDSS-VQSGL-PLQNSSFSMQSPLPQASFPSGQMGSSVF 342
SQS L + ST+ FSS++S S L P S+ + + + FPSG S F
Sbjct: 152 SQSSIFLSNWSTI--FSSNASPTDSQLSPTHTSTIAELAASTLSIFPSGSYAGSTF 205
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 25.0 bits (52), Expect = 7.1
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = -3
Query: 405 FNAVTTPAG*FSFRTDGLVGFQDGQDFSRLLQFVTVVDFTLPVAGLFIKIECQSRRAS 232
F A T G F RTDGLV + Q RL V + PV I+I+ ++R S
Sbjct: 220 FGAFVTLDG-FRKRTDGLVHISNIQLNGRLDHPSEAVSYGQPVFVKVIRIDESAKRIS 276
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 9.4
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = -1
Query: 476 TSTVQAFSSDSSV--QSGLPLQNSSFSM-QSPLPQASFPSGQMGSSVFKMGKIFLGFSSL 306
TST ++ S SSV S P +SS ++ S L +S PS SS L SS
Sbjct: 203 TSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSS---LSSSSS 259
Query: 305 SQLLTLPFQSQVCLSRSNAS 246
S + S +S S++S
Sbjct: 260 SSTASSSSSSSSIISSSSSS 279
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -1
Query: 455 SSDSSVQSGLPLQNSSFSMQSPLPQASFPSGQMGSSVFKMGKIFLGF 315
+S +Q P+Q+S+F+ +P P + P + ++ MG + F
Sbjct: 271 ASADRLQKNHPVQSSNFNPYTPAPSITVPPNYIPNTAM-MGPSYSSF 316
>SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 320
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 266 LSRSNASPDGQVICLRPDLVHLTTSLQSPSVL 171
+S S DG ++ LR L+H SL S+L
Sbjct: 261 ISHSLKLKDGSILVLRSSLLHQWYSLPKQSIL 292
>SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 449
Score = 24.6 bits (51), Expect = 9.4
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 290 LPFQSQVCLSRSNASPDGQVICLRPDLVHLTTSLQSPSVLR-RKYSSA 150
L FQ+Q SN SP GQ + +R ++ L + + ++ R Y+SA
Sbjct: 136 LGFQNQASSILSNRSPSGQYV-IRKNIEKLACLVHNEAMRRCSSYTSA 182
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 24.6 bits (51), Expect = 9.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 476 TSTVQAFSSDSSVQSGLPLQNSSFSMQSPLPQAS-FPSGQMGSSVFKMGKIFLGFSSLS 303
+S ++ SSD++ G PLQN+ F + + S F SS F G S +S
Sbjct: 652 SSDFESKSSDNTSLDGTPLQNTDFKKVATVEDDSPFDELDKFSSPFSSSSSRGGLSHIS 710
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 24.6 bits (51), Expect = 9.4
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = -1
Query: 413 SSFSMQSPLPQASFPSGQMGSSVFKMGKIFLGFSSLSQLLTLPFQSQVCLSRSNASPDGQ 234
SSFS + + P + + + K+ +S LS+LLT S+ + +P
Sbjct: 653 SSFSKRLAIASMQLPEHSASADLALLKKLLSRYSKLSRLLT----SEEQIGDGIYNP--- 705
Query: 233 VICLRPDLVHLTTS-LQSPSVLRRKYSSA 150
PDL + +T+ L P +L+ YS A
Sbjct: 706 -FIEDPDLSNSSTAVLYEPFLLKNHYSPA 733
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 79 SRVKRQEDDGSDDLTPDQLCEGRPADEYFRLSTEGDCRDV 198
S++ + + D +DD + + E P E+ +ST+G C V
Sbjct: 149 SQLYKTQHDENDDASDNSDVEEDPILEHKSISTKGACNRV 188
>SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +1
Query: 190 RDVVRCTRSGLKQITCPSGLAFDLDKQTCDWKGKVNNCDKLEKPRKIL 333
++++RC G + L F+ Q WK +CDK + +++L
Sbjct: 98 KELLRCYVRGYSIVILDVPLLFEAKMQFICWKTICVSCDKSIQKQRLL 145
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.137 0.441
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,072,893
Number of Sequences: 5004
Number of extensions: 40404
Number of successful extensions: 151
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 220420454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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