Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_N01
         (490 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   3.1  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   3.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   3.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   5.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   5.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.3  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 409 FAPKLDETDKKLPLIVWPHGG 471
           + P      + LP+I W HGG
Sbjct: 111 YVPADRTPSQSLPVIFWIHGG 131


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 156 NESGIYNGVGCEVGCDSR 209
           ++ G  NG G   GCD+R
Sbjct: 156 SQPGSLNGYGSSDGCDAR 173


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 409 FAPKLDETDKKLPLIVWPHGG 471
           + P      + LP+I W HGG
Sbjct: 111 YVPADRTPSQSLPVIFWIHGG 131


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 442 LPLIVWPHGG 471
           LPL+VW +GG
Sbjct: 158 LPLLVWIYGG 167


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 442 LPLIVWPHGG 471
           LPL+VW +GG
Sbjct: 158 LPLLVWIYGG 167


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +1

Query: 295 RVSTPREVPPSVASSTVEYLDLEHSDSEDAVKSFSALY 408
           RV+  REV P    + ++    E SDS       S LY
Sbjct: 856 RVTVKREVTPDGVIAQLQISSAEASDSGAYFCQASNLY 893


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +1

Query: 295 RVSTPREVPPSVASSTVEYLDLEHSDSEDAVKSFSALY 408
           RV+  REV P    + ++    E SDS       S LY
Sbjct: 852 RVTVKREVTPDGVIAQLQISSAEASDSGAYFCQASNLY 889


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.135    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,766
Number of Sequences: 438
Number of extensions: 3308
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)