Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_M24
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456980-1|CAG33261.1| 150|Homo sapiens PDE6D protein. 237 3e-62
BT007278-1|AAP35942.1| 150|Homo sapiens phosphodiesterase 6D, c... 237 3e-62
BC007831-1|AAH07831.1| 150|Homo sapiens phosphodiesterase 6D, c... 237 3e-62
AF045999-1|AAC39720.1| 150|Homo sapiens rod cGMP phosphodiester... 237 3e-62
AF042835-1|AAC25953.1| 150|Homo sapiens phosphodiesterase delta... 237 3e-62
AF022912-1|AAB87872.1| 150|Homo sapiens cGMP phosphodiesterase ... 237 3e-62
AC073476-3|AAY24151.1| 150|Homo sapiens unknown protein. 237 3e-62
AJ001626-1|CAA04880.1| 150|Homo sapiens p17 protein protein. 235 9e-62
AF028789-1|AAD01876.1| 220|Homo sapiens UNC-119b protein. 39 0.016
U40998-1|AAC50360.1| 240|Homo sapiens retinal protein protein. 38 0.028
BX641031-1|CAE46019.1| 167|Homo sapiens hypothetical protein pr... 38 0.028
BC027176-1|AAH27176.1| 240|Homo sapiens unc-119 homolog (C. ele... 38 0.028
AF125998-1|AAD31422.1| 240|Homo sapiens retinal photoreceptor s... 38 0.028
AF028788-1|AAD01875.1| 240|Homo sapiens UNC-119 protein. 38 0.028
BC108699-1|AAI08700.1| 455|Homo sapiens 5'-nucleotidase domain ... 30 7.5
AL121963-7|CAI19534.1| 455|Homo sapiens protein ( s (hypothetic... 30 7.5
AL121963-6|CAI19533.1| 195|Homo sapiens protein ( s (hypothetic... 30 7.5
AL050331-1|CAI21537.1| 455|Homo sapiens protein ( Human DNA seq... 30 7.5
BC011673-1|AAH11673.1| 220|Homo sapiens NUDCD3 protein protein. 29 9.9
BC003691-1|AAH03691.1| 220|Homo sapiens NudC domain containing ... 29 9.9
AK024226-1|BAB14855.1| 256|Homo sapiens protein ( Homo sapiens ... 29 9.9
AC004453-1|AAQ96892.1| 220|Homo sapiens unknown protein. 29 9.9
AB028991-1|BAA83020.1| 354|Homo sapiens KIAA1068 protein protein. 29 9.9
>CR456980-1|CAG33261.1| 150|Homo sapiens PDE6D protein.
Length = 150
Score = 237 bits (579), Expect = 3e-62
Identities = 105/137 (76%), Positives = 123/137 (89%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLNLRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+NLRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
Query: 322 LNFSSIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESAPESQMMPANV 501
LNFSS E M++FRLEQKV FKG+CLEEWFFEFG+VIPNSTNTWQS+IE+APESQMMPA+V
Sbjct: 63 LNFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASV 122
Query: 502 LNGNVVIETKFFDGDLL 552
L GNV+IETKFFD DLL
Sbjct: 123 LTGNVIIETKFFDDDLL 139
>BT007278-1|AAP35942.1| 150|Homo sapiens phosphodiesterase 6D,
cGMP-specific, rod, delta protein.
Length = 150
Score = 237 bits (579), Expect = 3e-62
Identities = 105/137 (76%), Positives = 123/137 (89%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLNLRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+NLRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
Query: 322 LNFSSIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESAPESQMMPANV 501
LNFSS E M++FRLEQKV FKG+CLEEWFFEFG+VIPNSTNTWQS+IE+APESQMMPA+V
Sbjct: 63 LNFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASV 122
Query: 502 LNGNVVIETKFFDGDLL 552
L GNV+IETKFFD DLL
Sbjct: 123 LTGNVIIETKFFDDDLL 139
>BC007831-1|AAH07831.1| 150|Homo sapiens phosphodiesterase 6D,
cGMP-specific, rod, delta protein.
Length = 150
Score = 237 bits (579), Expect = 3e-62
Identities = 105/137 (76%), Positives = 123/137 (89%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLNLRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+NLRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
Query: 322 LNFSSIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESAPESQMMPANV 501
LNFSS E M++FRLEQKV FKG+CLEEWFFEFG+VIPNSTNTWQS+IE+APESQMMPA+V
Sbjct: 63 LNFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASV 122
Query: 502 LNGNVVIETKFFDGDLL 552
L GNV+IETKFFD DLL
Sbjct: 123 LTGNVIIETKFFDDDLL 139
>AF045999-1|AAC39720.1| 150|Homo sapiens rod cGMP phosphodiesterase
delta subunit protein.
Length = 150
Score = 237 bits (579), Expect = 3e-62
Identities = 105/137 (76%), Positives = 123/137 (89%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLNLRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+NLRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
Query: 322 LNFSSIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESAPESQMMPANV 501
LNFSS E M++FRLEQKV FKG+CLEEWFFEFG+VIPNSTNTWQS+IE+APESQMMPA+V
Sbjct: 63 LNFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASV 122
Query: 502 LNGNVVIETKFFDGDLL 552
L GNV+IETKFFD DLL
Sbjct: 123 LTGNVIIETKFFDDDLL 139
>AF042835-1|AAC25953.1| 150|Homo sapiens phosphodiesterase delta
subunit protein.
Length = 150
Score = 237 bits (579), Expect = 3e-62
Identities = 105/137 (76%), Positives = 123/137 (89%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLNLRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+NLRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
Query: 322 LNFSSIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESAPESQMMPANV 501
LNFSS E M++FRLEQKV FKG+CLEEWFFEFG+VIPNSTNTWQS+IE+APESQMMPA+V
Sbjct: 63 LNFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASV 122
Query: 502 LNGNVVIETKFFDGDLL 552
L GNV+IETKFFD DLL
Sbjct: 123 LTGNVIIETKFFDDDLL 139
>AF022912-1|AAB87872.1| 150|Homo sapiens cGMP phosphodiesterase
delta subunit protein.
Length = 150
Score = 237 bits (579), Expect = 3e-62
Identities = 105/137 (76%), Positives = 123/137 (89%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLNLRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+NLRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
Query: 322 LNFSSIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESAPESQMMPANV 501
LNFSS E M++FRLEQKV FKG+CLEEWFFEFG+VIPNSTNTWQS+IE+APESQMMPA+V
Sbjct: 63 LNFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASV 122
Query: 502 LNGNVVIETKFFDGDLL 552
L GNV+IETKFFD DLL
Sbjct: 123 LTGNVIIETKFFDDDLL 139
>AC073476-3|AAY24151.1| 150|Homo sapiens unknown protein.
Length = 150
Score = 237 bits (579), Expect = 3e-62
Identities = 105/137 (76%), Positives = 123/137 (89%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLNLRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+NLRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
Query: 322 LNFSSIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESAPESQMMPANV 501
LNFSS E M++FRLEQKV FKG+CLEEWFFEFG+VIPNSTNTWQS+IE+APESQMMPA+V
Sbjct: 63 LNFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASV 122
Query: 502 LNGNVVIETKFFDGDLL 552
L GNV+IETKFFD DLL
Sbjct: 123 LTGNVIIETKFFDDDLL 139
>AJ001626-1|CAA04880.1| 150|Homo sapiens p17 protein protein.
Length = 150
Score = 235 bits (575), Expect = 9e-62
Identities = 104/137 (75%), Positives = 123/137 (89%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLNLRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+NLRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
Query: 322 LNFSSIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESAPESQMMPANV 501
LNFSS E M++FRLEQKV FKG+CLEEWFFEFG+VIPNSTNTWQS+IE+APESQ+MPA+V
Sbjct: 63 LNFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQVMPASV 122
Query: 502 LNGNVVIETKFFDGDLL 552
L GNV+IETKFFD DLL
Sbjct: 123 LTGNVIIETKFFDDDLL 139
>AF028789-1|AAD01876.1| 220|Homo sapiens UNC-119b protein.
Length = 220
Score = 38.7 bits (86), Expect = 0.016
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 295 LKCRVVSRELNFS-SIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESA 471
L+ R V + F+ + ++ FR+ ++ F+ + L+ + F FG+ IP+S NT + + +
Sbjct: 138 LRLRQVGATVEFTVGDKPVNNFRMIERHYFRNQLLKSFDFHFGFCIPSSKNTCEHIYDFP 197
Query: 472 PESQMMPA 495
P S+ + A
Sbjct: 198 PLSEELSA 205
>U40998-1|AAC50360.1| 240|Homo sapiens retinal protein protein.
Length = 240
Score = 37.9 bits (84), Expect = 0.028
Identities = 18/71 (25%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 295 LKCRVVSRELNFS-SIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESA 471
L+ R V + F+ + ++ FR+ ++ F+ + L+ + F FG+ IP+S NT + + +
Sbjct: 138 LRLRQVGATVEFTVGDKPVNNFRMIERHYFRNQLLKSFDFHFGFCIPSSKNTCEHIYDFP 197
Query: 472 PESQMMPANVL 504
P S+ + + ++
Sbjct: 198 PLSEELISEMI 208
>BX641031-1|CAE46019.1| 167|Homo sapiens hypothetical protein
protein.
Length = 167
Score = 37.9 bits (84), Expect = 0.028
Identities = 18/71 (25%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 295 LKCRVVSRELNFS-SIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESA 471
L+ R V + F+ + ++ FR+ ++ F+ + L+ + F FG+ IP+S NT + + +
Sbjct: 65 LRLRQVGATVEFTVGDKPVNNFRMIERHYFRNQLLKSFDFHFGFCIPSSKNTCEHIYDFP 124
Query: 472 PESQMMPANVL 504
P S+ + + ++
Sbjct: 125 PLSEELISEMI 135
>BC027176-1|AAH27176.1| 240|Homo sapiens unc-119 homolog (C.
elegans) protein.
Length = 240
Score = 37.9 bits (84), Expect = 0.028
Identities = 18/71 (25%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 295 LKCRVVSRELNFS-SIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESA 471
L+ R V + F+ + ++ FR+ ++ F+ + L+ + F FG+ IP+S NT + + +
Sbjct: 138 LRLRQVGATVEFTVGDKPVNNFRMIERHYFRNQLLKSFDFHFGFCIPSSKNTCEHIYDFP 197
Query: 472 PESQMMPANVL 504
P S+ + + ++
Sbjct: 198 PLSEELISEMI 208
>AF125998-1|AAD31422.1| 240|Homo sapiens retinal photoreceptor
synaptic protein protein.
Length = 240
Score = 37.9 bits (84), Expect = 0.028
Identities = 18/71 (25%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 295 LKCRVVSRELNFS-SIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESA 471
L+ R V + F+ + ++ FR+ ++ F+ + L+ + F FG+ IP+S NT + + +
Sbjct: 138 LRLRQVGATVEFTVGDKPVNNFRMIERHYFRNQLLKSFDFHFGFCIPSSKNTCEHIYDFP 197
Query: 472 PESQMMPANVL 504
P S+ + + ++
Sbjct: 198 PLSEELISEMI 208
>AF028788-1|AAD01875.1| 240|Homo sapiens UNC-119 protein.
Length = 240
Score = 37.9 bits (84), Expect = 0.028
Identities = 18/71 (25%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 295 LKCRVVSRELNFS-SIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESA 471
L+ R V + F+ + ++ FR+ ++ F+ + L+ + F FG+ IP+S NT + + +
Sbjct: 138 LRLRQVGATVEFTVGDKPVNNFRMIERHYFRNQLLKSFDFHFGFCIPSSKNTCEHIYDFP 197
Query: 472 PESQMMPANVL 504
P S+ + + ++
Sbjct: 198 PLSEELISEMI 208
>BC108699-1|AAI08700.1| 455|Homo sapiens 5'-nucleotidase domain
containing 1 protein.
Length = 455
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 302 HFSIRFGTRASCSTSGFDISSLYCQRIFPESASRRFNQF 186
HFS+ A+C GFD+ C+ PESA +N F
Sbjct: 4 HFSL-----AACDVVGFDLDHTLCRYNLPESAPLIYNSF 37
>AL121963-7|CAI19534.1| 455|Homo sapiens protein ( s (hypothetical)
genes, the ).).
Length = 455
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 302 HFSIRFGTRASCSTSGFDISSLYCQRIFPESASRRFNQF 186
HFS+ A+C GFD+ C+ PESA +N F
Sbjct: 4 HFSL-----AACDVVGFDLDHTLCRYNLPESAPLIYNSF 37
>AL121963-6|CAI19533.1| 195|Homo sapiens protein ( s (hypothetical)
genes, the ).).
Length = 195
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 302 HFSIRFGTRASCSTSGFDISSLYCQRIFPESASRRFNQF 186
HFS+ A+C GFD+ C+ PESA +N F
Sbjct: 4 HFSL-----AACDVVGFDLDHTLCRYNLPESAPLIYNSF 37
>AL050331-1|CAI21537.1| 455|Homo sapiens protein ( Human DNA
sequence from clone RP3-486I3 on chromosome 6q22.1-22.3
Contains the 3' end of a novel gene, a novel gene, the
gene for ).
Length = 455
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 302 HFSIRFGTRASCSTSGFDISSLYCQRIFPESASRRFNQF 186
HFS+ A+C GFD+ C+ PESA +N F
Sbjct: 4 HFSL-----AACDVVGFDLDHTLCRYNLPESAPLIYNSF 37
>BC011673-1|AAH11673.1| 220|Homo sapiens NUDCD3 protein protein.
Length = 220
Score = 29.5 bits (63), Expect = 9.9
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +1
Query: 133 AEEAKQDRVETILKGFQINWLNLRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVV 312
A A+ R IL Q + D+ +G + Y ++E VPK ++K + V
Sbjct: 15 AGAAEVPREPPILPRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQV 74
Query: 313 SRELNFSSIESMDRFRLEQKVLFKGR 390
S L+ SSI ++VL +G+
Sbjct: 75 SVALSSSSIRVAMLEENGERVLMEGK 100
>BC003691-1|AAH03691.1| 220|Homo sapiens NudC domain containing 3
protein.
Length = 220
Score = 29.5 bits (63), Expect = 9.9
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +1
Query: 133 AEEAKQDRVETILKGFQINWLNLRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVV 312
A A+ R IL Q + D+ +G + Y ++E VPK ++K + V
Sbjct: 15 AGAAEVPREPPILPRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQV 74
Query: 313 SRELNFSSIESMDRFRLEQKVLFKGR 390
S L+ SSI ++VL +G+
Sbjct: 75 SVALSSSSIRVAMLEENGERVLMEGK 100
>AK024226-1|BAB14855.1| 256|Homo sapiens protein ( Homo sapiens
cDNA FLJ14164 fis, clone NT2RP1000460, weakly similar to
NUCLEAR MOVEMENT PROTEIN NUDC. ).
Length = 256
Score = 29.5 bits (63), Expect = 9.9
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +1
Query: 133 AEEAKQDRVETILKGFQINWLNLRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVV 312
A A+ R IL Q + D+ +G + Y ++E VPK ++K + V
Sbjct: 15 AGAAEVPREPPILPRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQV 74
Query: 313 SRELNFSSIESMDRFRLEQKVLFKGR 390
S L+ SSI ++VL +G+
Sbjct: 75 SVALSSSSIRVAMLEENGERVLMEGK 100
>AC004453-1|AAQ96892.1| 220|Homo sapiens unknown protein.
Length = 220
Score = 29.5 bits (63), Expect = 9.9
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +1
Query: 133 AEEAKQDRVETILKGFQINWLNLRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVV 312
A A+ R IL Q + D+ +G + Y ++E VPK ++K + V
Sbjct: 15 AGAAEVPREPPILPRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQV 74
Query: 313 SRELNFSSIESMDRFRLEQKVLFKGR 390
S L+ SSI ++VL +G+
Sbjct: 75 SVALSSSSIRVAMLEENGERVLMEGK 100
>AB028991-1|BAA83020.1| 354|Homo sapiens KIAA1068 protein protein.
Length = 354
Score = 29.5 bits (63), Expect = 9.9
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +1
Query: 133 AEEAKQDRVETILKGFQINWLNLRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVV 312
A A+ R IL Q + D+ +G + Y ++E VPK ++K + V
Sbjct: 149 AGAAEVPREPPILPRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQV 208
Query: 313 SRELNFSSIESMDRFRLEQKVLFKGR 390
S L+ SSI ++VL +G+
Sbjct: 209 SVALSSSSIRVAMLEENGERVLMEGK 234
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,097,254
Number of Sequences: 237096
Number of extensions: 1779289
Number of successful extensions: 9350
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 9263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9350
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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