Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_M21
(631 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 236 2e-63
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 236 2e-63
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 159 4e-40
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 96 3e-21
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 44 2e-05
SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 28 0.97
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 27 3.0
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 26 5.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 5.2
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 25 6.8
SPBC16E9.07 |mug100||sequence orphan|Schizosaccharomyces pombe|c... 25 9.0
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 25 9.0
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc... 25 9.0
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 236 bits (577), Expect = 2e-63
Identities = 108/165 (65%), Positives = 124/165 (75%)
Frame = +1
Query: 13 EENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPE 192
EENLR RFNI DV LH DAIHRGGGQIIPT RR +YA L A P + EPV+L EIQ E
Sbjct: 678 EENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSE 737
Query: 193 VAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCV 372
A+GGIY VLN++RGHVF E Q GTP++ +KAYLPVNESFGFT +LR T GQAFPQ V
Sbjct: 738 NAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFTGELRQATAGQAFPQLV 797
Query: 373 FDHWQILPGDPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 507
FDHW + GDP +P SKP +V E RKRKGLKE +PD +Y D+L
Sbjct: 798 FDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYDRL 842
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 236 bits (577), Expect = 2e-63
Identities = 108/165 (65%), Positives = 124/165 (75%)
Frame = +1
Query: 13 EENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPE 192
EENLR RFNI DV LH DAIHRGGGQIIPT RR +YA L A P + EPV+L EIQ E
Sbjct: 678 EENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSE 737
Query: 193 VAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCV 372
A+GGIY VLN++RGHVF E Q GTP++ +KAYLPVNESFGFT +LR T GQAFPQ V
Sbjct: 738 NAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFTGELRQATAGQAFPQLV 797
Query: 373 FDHWQILPGDPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 507
FDHW + GDP +P SKP +V E RKRKGLKE +PD +Y D+L
Sbjct: 798 FDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYDRL 842
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 159 bits (385), Expect = 4e-40
Identities = 80/176 (45%), Positives = 112/176 (63%), Gaps = 12/176 (6%)
Frame = +1
Query: 13 EENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPE 192
+E +R V F + DV L + I+RGGGQIIPT RR Y+ LTA PRLMEPVY+ E+ P
Sbjct: 794 DETIRNVNFRLMDVVLAPEQIYRGGGQIIPTARRVCYSSFLTASPRLMEPVYMVEVHAPA 853
Query: 193 VAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCV 372
++ IY +L RRRGHV ++ G+P+++V+A +PV +S GF DLR +T GQA Q V
Sbjct: 854 DSLPIIYDLLTRRRGHVLQDIPRPGSPLYLVRALIPVIDSCGFETDLRVHTQGQAMCQMV 913
Query: 373 FDHWQILPGDPCEPNSKPYVV------------VQETRKRKGLKEGLPDLNQYLDK 504
FDHWQ++PGDP + + KP + + +TR+RKGL E + +Y D+
Sbjct: 914 FDHWQVVPGDPLDKSIKPKPLEPARGSDLARDFLIKTRRRKGLVEDV-STTRYFDQ 968
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1000
Score = 96.3 bits (229), Expect = 3e-21
Identities = 42/106 (39%), Positives = 64/106 (60%)
Frame = +1
Query: 88 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAG 267
GQ+I + + L PRLM +Y C++Q +G +YGV+++RRG V +E G
Sbjct: 841 GQVISVVKESIRHGFLGWSPRLMLAMYSCDVQATSEVLGRVYGVVSKRRGRVIDEEMKEG 900
Query: 268 TPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDP 405
TP F+VKA +PV ESFGF ++ T G A+PQ +F +++L +P
Sbjct: 901 TPFFIVKALIPVVESFGFAVEILKRTSGAAYPQLIFHGFEMLDENP 946
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 44.0 bits (99), Expect = 2e-05
Identities = 21/74 (28%), Positives = 40/74 (54%)
Frame = +1
Query: 133 LTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNES 312
L A P ++EP+ I P GG+ G L++R+ + + F ++A +P+N
Sbjct: 668 LQANPMVLEPIMNVSITAPVEHQGGVIGNLDKRKATIVDSD--TDEDEFTLQAEVPLNSM 725
Query: 313 FGFTADLRSNTGGQ 354
F +++D+R+ T G+
Sbjct: 726 FSYSSDIRALTKGK 739
>SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor
Fep1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 564
Score = 28.3 bits (60), Expect = 0.97
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 296 CPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTP 421
CP+ + + + GR+S S + + S ET+ASPTP
Sbjct: 88 CPALNNRIRSLNASKSQSGRKSLSPNPSSVPSSTETKASPTP 129
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 26.6 bits (56), Expect = 3.0
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +2
Query: 335 APTPEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQERGKA*RKVSP 481
A TP RRSRS S S + S S S R E K R +P
Sbjct: 314 ADTPSPRRSRSYSDEDEESVYSSDVSTESSSQFSSRSSEYSKPSRPTAP 362
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 25.8 bits (54), Expect = 5.2
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +1
Query: 97 IPTTRRCLYACLLTAQPRLMEPVYL-CEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTP 273
IP T RC+ + + + P+L P L + CP + + V+ H F + P
Sbjct: 386 IPNTERCILSAFICSPPQLPLPNPLRMYLPCPSLNSTEV-SVITLAPQHSFLNIVINLNP 444
Query: 274 MFVVKAY 294
+K+Y
Sbjct: 445 ALALKSY 451
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 5.2
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +2
Query: 245 SRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTP 421
++ R P P S R P S + P P RS +A SI P+ R++P P
Sbjct: 307 NKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP--LPPQGRSAPPP 363
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 25.4 bits (53), Expect = 6.8
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 308 SRSGSPPTCAPTPEGRRSRSAS---SITGRSCPETRASPTPSHTLSYRK 445
+R SP P + + S +I + P T A P PSH ++ RK
Sbjct: 533 TRPSSPTESVEIPSNTTTIAPSPVPTIIAPALPSTPAPPLPSHPMATRK 581
>SPBC16E9.07 |mug100||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 313
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 524 CK*YLH-CNMYIYIYICNVIDGASRTLHH 607
CK ++ C M + IY+C++ S L H
Sbjct: 47 CKSQIYDCRMAVKIYVCSITANKSTNLKH 75
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 208 IYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGF 321
++ LNR++ + F Q+ V+ A L V +FGF
Sbjct: 275 LFDHLNRKKTNNFNTHQILSQSDVVLNALLSVATAFGF 312
>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 197 ATSGHWISQRYTGSISLGCAVNRHAYR 117
A +G +IS YTG+ +L V RH R
Sbjct: 437 ANTGDYISDLYTGTPALKGDVTRHGTR 463
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,597,640
Number of Sequences: 5004
Number of extensions: 53881
Number of successful extensions: 155
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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