Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_M21
(631 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 303 8e-83
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 303 8e-83
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 158 3e-39
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 158 3e-39
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 71 9e-13
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 33 0.17
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 33 0.17
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 33 0.17
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 31 0.90
AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical... 31 0.90
U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (... 30 1.2
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 30 1.2
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 30 1.2
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 29 2.7
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 29 2.7
DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related ... 29 2.7
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 29 2.7
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 29 2.7
AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeti... 29 2.7
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 29 2.7
U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily ass... 29 3.6
Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z69636-2|CAA93463.3| 247|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 28 4.8
U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical pr... 28 4.8
U97004-5|AAO26009.1| 240|Caenorhabditis elegans Hypothetical pr... 28 4.8
U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily as... 28 4.8
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 28 4.8
U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily ass... 28 4.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ... 28 6.3
AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical ... 28 6.3
AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical ... 28 6.3
AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical ... 28 6.3
AF003740-1|AAM15561.2| 488|Caenorhabditis elegans Hypothetical ... 28 6.3
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 28 6.3
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 28 6.3
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 27 8.4
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical pr... 27 8.4
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 27 8.4
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 27 8.4
U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center... 27 8.4
U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center... 27 8.4
U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center... 27 8.4
U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center... 27 8.4
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 27 8.4
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 27 8.4
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 303 bits (743), Expect = 8e-83
Identities = 135/166 (81%), Positives = 150/166 (90%)
Frame = +1
Query: 10 AEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP 189
++EN+RGVRFN++DVTLH DAIHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCP
Sbjct: 687 SDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCP 746
Query: 190 EVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQC 369
E AVGGIYGVLNRRRGHVFEESQV GTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQC
Sbjct: 747 EAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQC 806
Query: 370 VFDHWQILPGDPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 507
VFDHWQ+LPGDP E +KP +V +TRKRKGLKEG+P L+ YLDK+
Sbjct: 807 VFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYLDKM 852
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 303 bits (743), Expect = 8e-83
Identities = 135/166 (81%), Positives = 150/166 (90%)
Frame = +1
Query: 10 AEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP 189
++EN+RGVRFN++DVTLH DAIHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCP
Sbjct: 687 SDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCP 746
Query: 190 EVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQC 369
E AVGGIYGVLNRRRGHVFEESQV GTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQC
Sbjct: 747 EAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQC 806
Query: 370 VFDHWQILPGDPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 507
VFDHWQ+LPGDP E +KP +V +TRKRKGLKEG+P L+ YLDK+
Sbjct: 807 VFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYLDKM 852
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 158 bits (384), Expect = 3e-39
Identities = 76/175 (43%), Positives = 110/175 (62%), Gaps = 12/175 (6%)
Frame = +1
Query: 13 EENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPE 192
EE +R V+F + D + T+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P
Sbjct: 785 EEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPA 844
Query: 193 VAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCV 372
V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SFGF DLR +T GQAF
Sbjct: 845 DCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGFETDLRIHTQGQAFCMSA 904
Query: 373 FDHWQILPGDPCEPN---------SKPYVVVQ---ETRKRKGLKEGLPDLNQYLD 501
F HWQ++PGDP + + P++ + +TR+RKGL E + +N++ D
Sbjct: 905 FHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRKGLSEDV-SVNKFFD 958
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 158 bits (384), Expect = 3e-39
Identities = 76/175 (43%), Positives = 110/175 (62%), Gaps = 12/175 (6%)
Frame = +1
Query: 13 EENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPE 192
EE +R V+F + D + T+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P
Sbjct: 660 EEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPA 719
Query: 193 VAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCV 372
V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SFGF DLR +T GQAF
Sbjct: 720 DCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGFETDLRIHTQGQAFCMSA 779
Query: 373 FDHWQILPGDPCEPN---------SKPYVVVQ---ETRKRKGLKEGLPDLNQYLD 501
F HWQ++PGDP + + P++ + +TR+RKGL E + +N++ D
Sbjct: 780 FHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRKGLSEDV-SVNKFFD 833
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical protein
K10C3.5a protein.
Length = 894
Score = 70.5 bits (165), Expect = 9e-13
Identities = 36/107 (33%), Positives = 53/107 (49%)
Frame = +1
Query: 85 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 264
GGQ++ + A RL+ +Y C + A+G ++ VL++R+ V E
Sbjct: 732 GGQMMTAIKASCSAAAKKLALRLVAAMYRCTVTTASQALGKVHAVLSQRKSKVLSEDINE 791
Query: 265 GTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDP 405
T +F V + +PV ESF F LR T G A Q F HWQ++ DP
Sbjct: 792 ATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 838
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = +1
Query: 241 VFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDP 405
V E T +F V + +PV ESF F LR T G A Q F HWQ++ DP
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 649
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/114 (23%), Positives = 49/114 (42%)
Frame = +1
Query: 13 EENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPE 192
+ + G+ I D + H A+ +I T + + A L+EP+ E P
Sbjct: 598 KSRIAGIHVRIQDGSTH--AVDSTEIAMINTMQNMMRESFEKANWLLLEPIMKVEATVPT 655
Query: 193 VAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQ 354
G + L +R + G + +A P+++ FG+T++LRS T G+
Sbjct: 656 EFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSELRSLTEGK 707
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 245 SRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCP-ETRASPTP 421
+R SP H S RR P R+ SPP +P+ R +R A I P E R SP P
Sbjct: 211 ARGNDSPLHRSSAARRHSPPPRRA-SPPRRTSSPK-RDARPAREIRDSREPREVRRSPPP 268
Query: 422 SHTLSYRK 445
S RK
Sbjct: 269 RRAASPRK 276
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 245 SRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCP-ETRASPTP 421
+R SP H S RR P R+ SPP +P+ R +R A I P E R SP P
Sbjct: 211 ARGNDSPLHRSSAARRHSPPPRRA-SPPRRTSSPK-RDARPAREIRDSREPREVRRSPPP 268
Query: 422 SHTLSYRK 445
S RK
Sbjct: 269 RRAASPRK 276
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 245 SRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCP-ETRASPTP 421
+R SP H S RR P R+ SPP +P+ R +R A I P E R SP P
Sbjct: 211 ARGNDSPLHRSSAARRHSPPPRRA-SPPRRTSSPK-RDARPAREIRDSREPREVRRSPPP 268
Query: 422 SHTLSYRK 445
S RK
Sbjct: 269 RRAASPRK 276
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 245 SRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCP-ETRASPTP 421
+R SP H S RR P R+ SPP +P+ R +R A I P E R SP P
Sbjct: 211 ARGNDSPLHRSSAARRHSPPPRRA-SPPRRTSSPK-RDARPAREIRDSREPREVRRSPPP 268
Query: 422 SHTLSYRK 445
S RK
Sbjct: 269 RRAASPRK 276
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 31.9 bits (69), Expect = 0.39
Identities = 36/133 (27%), Positives = 49/133 (36%), Gaps = 1/133 (0%)
Frame = +2
Query: 35 DSTFMTSPFTLTPFTEVAVKSFQRLGDACTRVC*PRSPGLWNPCTFAXXXXXXXXXXXXT 214
DSTF+ S T P A Q G P P L P T T
Sbjct: 66 DSTFLASETTTNPAPMSA--GIQTRGSYANTKSLP-VPDL-PPSTLKTTTKPVITATRST 121
Query: 215 AC*TDGAGTCSRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSI-TGRS 391
A T + ++P + RT +T + SPPT TP RS +A ++ T ++
Sbjct: 122 ARITTTKASTLEPPEAPTKAST--ARTISTTETTTSPPTTTVTPRTTRSSTARTVATTKT 179
Query: 392 CPETRASPTPSHT 430
P T + T T
Sbjct: 180 SPSTLRTTTKPPT 192
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 30.7 bits (66), Expect = 0.90
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +2
Query: 245 SRSRKSPA---HPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASS---ITGRSCPETR 406
+R R+SP+ P + RR PS SRS +P P RRS SAS R+ ++
Sbjct: 373 ARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSK 432
Query: 407 ASPTPSHTLSYRKQERGKA*RKVSP 481
+ P P S + + R+ SP
Sbjct: 433 SPPAPRRRRSPSQSKSPAPRRRRSP 457
>AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical
protein Y73B3A.5 protein.
Length = 310
Score = 30.7 bits (66), Expect = 0.90
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 224 TDGAGTCSRSRKSPAHP-CSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPE 400
TD T S S SP CS S + S +P T +P E R+ R S ++ + P
Sbjct: 117 TDSPTTHSVSTPSPTDSVCS----PSSSVASSATPSTSSPVDESRQCRKRS-LSSSTTPS 171
Query: 401 TRASPTP 421
T A P P
Sbjct: 172 TTAPPQP 178
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +2
Query: 287 RRTCPS--TSRSGSPPTCAP-TPEGRRSRSASSITGRSCPETRASPTPSHT 430
R PS TS PP P P G SA S+ G P T + TPS T
Sbjct: 81 RHEIPSFMTSLQAPPPPPPPQNPRGNTDFSALSLLGTDSPTTHSVSTPSPT 131
>U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform b protein.
Length = 1069
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 368 HCGNACPPVLERRSAVNPNDSLTGRYAFTTNMGVPA 261
HC A P++E + N +D+L RY T G+PA
Sbjct: 490 HC-LAAMPLVENDCSANKDDALFSRYLHTKQRGIPA 524
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +2
Query: 302 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQERGKA*RKVSP 481
S+S+ PP+ +P+ GRR R +++ S A+ TP+ R + K P
Sbjct: 503 SSSKMPPPPSPSPSTPGRRGRRPRTLSTMSMEPAAAAVTPAPRGRPRSRSAAKVSENTEP 562
Query: 482 I 484
+
Sbjct: 563 L 563
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +1
Query: 85 GGQIIPT-----TRRCLYACLLTAQPRLMEPVYLCEIQCP-EVAVGGIYGVLNRRRGHVF 246
GG+I P ++C+ L + + L EPV +I+ + I L RRR H
Sbjct: 565 GGKINPALLSACAQKCVSEALSSGEMVLTEPVMEVQIEIRNDDPTQPILNELLRRRAHFE 624
Query: 247 EESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGG 351
T + + A LP++E+ + +R+ T G
Sbjct: 625 HSDATESTEIRRICAILPLSETENLSKTVRTLTSG 659
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +2
Query: 287 RRTCPS--TSRSGSPPTCAP--TPEGRRSRSASSITGRSCPETRASPTPSHT 430
R PS TS PP P P G SA S+ G P T + TPS T
Sbjct: 175 RHEIPSFMTSLQAPPPPPPPPQNPRGNTDFSALSLLGTDSPTTHSVSTPSPT 226
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +2
Query: 287 RRTCPS--TSRSGSPPTCAP--TPEGRRSRSASSITGRSCPETRASPTPSHT 430
R PS TS PP P P G SA S+ G P T + TPS T
Sbjct: 175 RHEIPSFMTSLQAPPPPPPPPQNPRGNTDFSALSLLGTDSPTTHSVSTPSPT 226
>DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related
alternative variant b protein.
Length = 482
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 302 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPT 418
S RSG PP A TP G+ SR A + P+ A+PT
Sbjct: 409 SVDRSGQPPISASTP-GKASR-ADLFNRLATPKVTATPT 445
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 302 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPT 418
S RSG PP A TP G+ SR A + P+ A+PT
Sbjct: 409 SVDRSGQPPISASTP-GKASR-ADLFNRLATPKVTATPT 445
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +2
Query: 287 RRTCPS--TSRSGSPPTCAP--TPEGRRSRSASSITGRSCPETRASPTPSHT 430
R PS TS PP P P G SA S+ G P T + TPS T
Sbjct: 175 RHEIPSFMTSLQAPPPPPPPPQNPRGNTDFSALSLLGTDSPTTHSVSTPSPT 226
>AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform b
protein.
Length = 482
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 302 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPT 418
S RSG PP A TP G+ SR A + P+ A+PT
Sbjct: 409 SVDRSGQPPISASTP-GKASR-ADLFNRLATPKVTATPT 445
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 302 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPT 418
S RSG PP A TP G+ SR A + P+ A+PT
Sbjct: 409 SVDRSGQPPISASTP-GKASR-ADLFNRLATPKVTATPT 445
>U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily
assigned gene nameprotein 150, isoform b protein.
Length = 638
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 323 PPTCAPTPE--GRRSRSASSITGRSCPETRASPTPSHTLSYRKQER 454
PP TPE +++ S + + + P TP+ TLS R++ R
Sbjct: 195 PPVQVVTPEKKSKKNSSKNELDSKDVPSCSGESTPAGTLSPRRETR 240
>Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical
protein F58B3.5 protein.
Length = 917
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 329 TCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQERGKA*RKVSPI 484
+C PTP + ++ IT E ++P PS ++Q++GK +P+
Sbjct: 702 SCTPTPTS--TPASGIITEAPKKEAPSTPAPSEPKKAKEQKKGKGGAAAAPV 751
>Z69636-2|CAA93463.3| 247|Caenorhabditis elegans Hypothetical
protein F20B10.3 protein.
Length = 247
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = -3
Query: 410 SHGSPGRICQ*SKTHCGNACPPVLERRSAVNPNDSLTGRYAFTTNMGVPATCDSSNTCPR 231
S G+ G Q S GN PV + V D+ Y TT M +P SSNT P
Sbjct: 85 STGNCGVTQQASACSTGNCNGPVAGSANVVPVFDASI--YTTTTPMPIPIRTISSNTAPI 142
Query: 230 RLFSTP 213
++ P
Sbjct: 143 KVIRVP 148
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
F22E10.2 protein.
Length = 1324
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 85 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRR 231
G Q + T RCL A +L + +M + + + A G ++ ++NR+
Sbjct: 1017 GDQTVDKTFRCLMAMMLCCEGIIMSAQFFPQFVGAKSAAGQMFNLINRQ 1065
>U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical
protein R08E5.2c protein.
Length = 304
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 114 MPVRVSVDRAA--QAYGTRVPLRDPVSGGGG 200
MP +SV+R A +AYG V L DP G G
Sbjct: 98 MPATMSVERRAMLRAYGAEVILSDPAEGHPG 128
>U97004-5|AAO26009.1| 240|Caenorhabditis elegans Hypothetical
protein R08E5.2b protein.
Length = 240
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 114 MPVRVSVDRAA--QAYGTRVPLRDPVSGGGG 200
MP +SV+R A +AYG V L DP G G
Sbjct: 1 MPATMSVERRAMLRAYGAEVILSDPAEGHPG 31
>U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical
protein R08E5.2a protein.
Length = 337
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 114 MPVRVSVDRAA--QAYGTRVPLRDPVSGGGG 200
MP +SV+R A +AYG V L DP G G
Sbjct: 98 MPATMSVERRAMLRAYGAEVILSDPAEGHPG 128
>U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform d protein.
Length = 664
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +2
Query: 335 APTPEGRRSRSASSITGRSC----PETRASPTPSHTLSYRKQERG 457
A TP GR S++ RS P +RA+P P H L Y ERG
Sbjct: 571 AETP-GRYFPENSAVLERSSTPSFPVSRATPLPFHPLLYNNGERG 614
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform a protein.
Length = 1112
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +2
Query: 335 APTPEGRRSRSASSITGRSC----PETRASPTPSHTLSYRKQERG 457
A TP GR S++ RS P +RA+P P H L Y ERG
Sbjct: 571 AETP-GRYFPENSAVLERSSTPSFPVSRATPLPFHPLLYNNGERG 614
>U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform c protein.
Length = 949
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +2
Query: 335 APTPEGRRSRSASSITGRSC----PETRASPTPSHTLSYRKQERG 457
A TP GR S++ RS P +RA+P P H L Y ERG
Sbjct: 571 AETP-GRYFPENSAVLERSSTPSFPVSRATPLPFHPLLYNNGERG 614
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = +2
Query: 251 SRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTP 421
S P P R P + PP P+P+ R R+ S R+ P T SP P
Sbjct: 136 SSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIP 192
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 308 SRSGSPPTCAPTPEGRRSRSASSITGRSCP 397
SRS SPP +P+P+ RR S S +G + P
Sbjct: 253 SRSNSPPNRSPSPKKRRDNS-SPRSGSASP 281
>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
protein Y73F8A.5 protein.
Length = 1019
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 299 PSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRAS 412
P TS G C P G S S GR CPE++ S
Sbjct: 273 PGTSSPGGSAECIPCSPGSFSSKGSGQCGR-CPESQYS 309
>AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical
protein T04B8.5c protein.
Length = 836
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 169 LCEIQCP-EVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNT 345
LC I V GG+Y +++R G F G FV + GFT L +N
Sbjct: 20 LCAISSNGAVEGGGVYYMISRSLGPEF--GGAIGVLFFVANVFSCALYISGFTEALMNNI 77
Query: 346 GGQAFP 363
G FP
Sbjct: 78 GNGQFP 83
>AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical
protein T04B8.5b protein.
Length = 939
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 169 LCEIQCP-EVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNT 345
LC I V GG+Y +++R G F G FV + GFT L +N
Sbjct: 123 LCAISSNGAVEGGGVYYMISRSLGPEF--GGAIGVLFFVANVFSCALYISGFTEALMNNI 180
Query: 346 GGQAFP 363
G FP
Sbjct: 181 GNGQFP 186
>AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical
protein T04B8.5a protein.
Length = 952
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 169 LCEIQCP-EVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNT 345
LC I V GG+Y +++R G F G FV + GFT L +N
Sbjct: 136 LCAISSNGAVEGGGVYYMISRSLGPEF--GGAIGVLFFVANVFSCALYISGFTEALMNNI 193
Query: 346 GGQAFP 363
G FP
Sbjct: 194 GNGQFP 199
>AF003740-1|AAM15561.2| 488|Caenorhabditis elegans Hypothetical
protein C41D11.3 protein.
Length = 488
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 320 SPPTCAPTPE-GRRSRSASSITGRSCPETRASPTPSHTLSYR 442
SP TP RRSRS+ S S ET S TPS +LS R
Sbjct: 408 SPTKYPVTPVYTRRSRSSLSDIRESTSETTGSITPSTSLSER 449
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 27.9 bits (59), Expect = 6.3
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Frame = +2
Query: 218 C*TDGAGTCSRSRKSPAHPCSW*R----RTCPSTSRSGSPPTCAPTPEGRRSRSASSITG 385
C D CS SP P + T STS + + PT PTP R + SA +I
Sbjct: 219 CFEDNHKDCSSGSTSPTCPKNATAVASVTTTASTSTTKTSPTKPPTPTSRPT-SAPTIPP 277
Query: 386 RSCPETRASPTPSHTLSYRKQER 454
+ + +P TLS + R
Sbjct: 278 QPSANSTRAPDIGKTLSTQPPRR 300
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Frame = +2
Query: 152 LWNPCTFAXXXXXXXXXXXXTAC*TDGAGTCSRSRKSPAHPCSW*RRTCPSTSRSGSPP- 328
L N C T C +DG G C K+ P + R C + P
Sbjct: 884 LQNNCPINYDCTLNALTQEHTCCGSDGQGVCPSGEKAFMDPRTNSPRQCAMAADGKCPGG 943
Query: 329 -TCAPTPEGRRSRSASSITGRSCPETRA 409
C + + +I G CP R+
Sbjct: 944 YLCRFSQSNHKYYCCGNIQGSMCPSGRS 971
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 400 DPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 507
D PN+ Y+V R R+G + LPD+ ++KL
Sbjct: 665 DKGPPNTLFYIVRDVVRVRQGYRFKLPDIGLVIEKL 700
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 400 DPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 507
D PN+ Y+V R R+G + LPD+ ++KL
Sbjct: 705 DKGPPNTLFYIVRDVVRVRQGYRFKLPDIGLVIEKL 740
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 400 DPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 507
D PN+ Y+V R R+G + LPD+ ++KL
Sbjct: 766 DKGPPNTLFYIVRDVVRVRQGYRFKLPDIGLVIEKL 801
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 400 DPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 507
D PN+ Y+V R R+G + LPD+ ++KL
Sbjct: 665 DKGPPNTLFYIVRDVVRVRQGYRFKLPDIGLVIEKL 700
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 400 DPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 507
D PN+ Y+V R R+G + LPD+ ++KL
Sbjct: 705 DKGPPNTLFYIVRDVVRVRQGYRFKLPDIGLVIEKL 740
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 400 DPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 507
D PN+ Y+V R R+G + LPD+ ++KL
Sbjct: 766 DKGPPNTLFYIVRDVVRVRQGYRFKLPDIGLVIEKL 801
>Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical
protein R06F6.4 protein.
Length = 429
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 13 EENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQ 144
+ NL +++ TLH +HR IP R CLY C L AQ
Sbjct: 309 KRNLCEKLLDLFQDTLHDHNVHR-----IPVLR-CLYICSLAAQ 346
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 293 TCPSTSRSGSPPTCAPTPEGRRSRSAS-SITGRSCPETRASPTPSHT 430
T PST+ + + T TP+ S S S S T + T A+ TP T
Sbjct: 602 TVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPT 648
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 293 TCPSTSRSGSPPTCAPTPEGRRSRSAS-SITGRSCPETRASPTPSHT 430
T PST+ + + T TP+ S S S S T + T A+ TP T
Sbjct: 602 TVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPT 648
>U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center
kinase family protein1, isoform d protein.
Length = 638
Score = 27.5 bits (58), Expect = 8.4
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = -2
Query: 420 GVGL-ARVSGQDLPVIEDALRERLPSGVGAQVGGEPERL-VDGQVRLHH----EHGCAGD 259
G GL S Q+ DA+R+R P G G ++ + Q L+H +G
Sbjct: 491 GSGLNGNSSNQNHSEYSDAVRQRGPGGSGGRLDYRESHVPTSSQENLNHGRMYGYGAPPP 550
Query: 258 LRLLEHVPAPSVQHAVD 208
R +VP P V+ A+D
Sbjct: 551 SREANNVPMPRVKGALD 567
>U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center
kinase family protein1, isoform b protein.
Length = 651
Score = 27.5 bits (58), Expect = 8.4
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = -2
Query: 420 GVGL-ARVSGQDLPVIEDALRERLPSGVGAQVGGEPERL-VDGQVRLHH----EHGCAGD 259
G GL S Q+ DA+R+R P G G ++ + Q L+H +G
Sbjct: 504 GSGLNGNSSNQNHSEYSDAVRQRGPGGSGGRLDYRESHVPTSSQENLNHGRMYGYGAPPP 563
Query: 258 LRLLEHVPAPSVQHAVD 208
R +VP P V+ A+D
Sbjct: 564 SREANNVPMPRVKGALD 580
>U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center
kinase family protein1, isoform c protein.
Length = 650
Score = 27.5 bits (58), Expect = 8.4
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = -2
Query: 420 GVGL-ARVSGQDLPVIEDALRERLPSGVGAQVGGEPERL-VDGQVRLHH----EHGCAGD 259
G GL S Q+ DA+R+R P G G ++ + Q L+H +G
Sbjct: 503 GSGLNGNSSNQNHSEYSDAVRQRGPGGSGGRLDYRESHVPTSSQENLNHGRMYGYGAPPP 562
Query: 258 LRLLEHVPAPSVQHAVD 208
R +VP P V+ A+D
Sbjct: 563 SREANNVPMPRVKGALD 579
>U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center
kinase family protein1, isoform a protein.
Length = 653
Score = 27.5 bits (58), Expect = 8.4
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = -2
Query: 420 GVGL-ARVSGQDLPVIEDALRERLPSGVGAQVGGEPERL-VDGQVRLHH----EHGCAGD 259
G GL S Q+ DA+R+R P G G ++ + Q L+H +G
Sbjct: 506 GSGLNGNSSNQNHSEYSDAVRQRGPGGSGGRLDYRESHVPTSSQENLNHGRMYGYGAPPP 565
Query: 258 LRLLEHVPAPSVQHAVD 208
R +VP P V+ A+D
Sbjct: 566 SREANNVPMPRVKGALD 582
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 299 PSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLSY 439
P + G PP A T GRR +TG S PE R P P++ L++
Sbjct: 491 PFKGQFGGPPIIA-TINGRRHEIR--LTG-SAPEVRIEPEPAYHLTH 533
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 400 DPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 507
D PN+ Y+V R R+G + LPD+ ++KL
Sbjct: 705 DKGPPNTLFYIVRDVVRVRQGYRFKLPDIGLVIEKL 740
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,080,895
Number of Sequences: 27780
Number of extensions: 344952
Number of successful extensions: 1457
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1455
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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