Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_M19
         (484 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047015-1|AAH47015.1|  294|Homo sapiens transmembrane protein 1...    82   1e-15
L31584-1|AAA74230.1|  378|Homo sapiens G protein-coupled recepto...    33   0.70 
L31581-1|AAA74231.1|  378|Homo sapiens G protein-coupled recepto...    33   0.70 
L08176-1|AAA58615.1|  378|Homo sapiens EBV induced G-protein cou...    33   0.70 
EF064758-1|ABK41941.1|  378|Homo sapiens chemokine (C-C motif) r...    33   0.70 
BC035343-1|AAH35343.1|  378|Homo sapiens chemokine (C-C motif) r...    33   0.70 
AY587876-1|AAT52232.1|  378|Homo sapiens CC chemokine receptor 7...    33   0.70 

>BC047015-1|AAH47015.1|  294|Homo sapiens transmembrane protein 110
           protein.
          Length = 294

 Score = 81.8 bits (193), Expect = 1e-15
 Identities = 38/75 (50%), Positives = 50/75 (66%)
 Frame = +2

Query: 260 CSKDALTSTYGWFMQFLLAVLAFTCLIGKRFCEPLYARRPWLIWFYDTSKQGLGALIIHA 439
           C   AL  ++G F+Q LL V+AF+ L+ KRF EP + RRPW IWF DTSKQ +G L IH 
Sbjct: 27  CESGALMHSFGIFLQGLLGVVAFSTLMLKRFREPKHERRPWRIWFLDTSKQAIGMLFIHF 86

Query: 440 ANVWLSPHFTGNTCT 484
           ANV+L+     + C+
Sbjct: 87  ANVYLADLTEEDPCS 101


>L31584-1|AAA74230.1|  378|Homo sapiens G protein-coupled receptor
           protein.
          Length = 378

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 224 NNSSDYLLSELHCSKDALTSTYGWFMQFLLAVLAFTCLIG 343
           N + DY L E  CSK  + +   WF+  + +++ F  L+G
Sbjct: 36  NTTVDYTLFESLCSKKDVRNFKAWFLPIMYSIICFVGLLG 75


>L31581-1|AAA74231.1|  378|Homo sapiens G protein-coupled receptor
           protein.
          Length = 378

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 224 NNSSDYLLSELHCSKDALTSTYGWFMQFLLAVLAFTCLIG 343
           N + DY L E  CSK  + +   WF+  + +++ F  L+G
Sbjct: 36  NTTVDYTLFESLCSKKDVRNFKAWFLPIMYSIICFVGLLG 75


>L08176-1|AAA58615.1|  378|Homo sapiens EBV induced G-protein
           coupled receptor protein.
          Length = 378

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 224 NNSSDYLLSELHCSKDALTSTYGWFMQFLLAVLAFTCLIG 343
           N + DY L E  CSK  + +   WF+  + +++ F  L+G
Sbjct: 36  NTTVDYTLFESLCSKKDVRNFKAWFLPIMYSIICFVGLLG 75


>EF064758-1|ABK41941.1|  378|Homo sapiens chemokine (C-C motif)
           receptor 7 protein.
          Length = 378

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 224 NNSSDYLLSELHCSKDALTSTYGWFMQFLLAVLAFTCLIG 343
           N + DY L E  CSK  + +   WF+  + +++ F  L+G
Sbjct: 36  NTTVDYTLFESLCSKKDVRNFKAWFLPIMYSIICFVGLLG 75


>BC035343-1|AAH35343.1|  378|Homo sapiens chemokine (C-C motif)
           receptor 7 protein.
          Length = 378

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 224 NNSSDYLLSELHCSKDALTSTYGWFMQFLLAVLAFTCLIG 343
           N + DY L E  CSK  + +   WF+  + +++ F  L+G
Sbjct: 36  NTTVDYTLFESLCSKKDVRNFKAWFLPIMYSIICFVGLLG 75


>AY587876-1|AAT52232.1|  378|Homo sapiens CC chemokine receptor 7
           protein.
          Length = 378

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 224 NNSSDYLLSELHCSKDALTSTYGWFMQFLLAVLAFTCLIG 343
           N + DY L E  CSK  + +   WF+  + +++ F  L+G
Sbjct: 36  NTTVDYTLFESLCSKKDVRNFKAWFLPIMYSIICFVGLLG 75


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,420,580
Number of Sequences: 237096
Number of extensions: 1113394
Number of successful extensions: 1742
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1742
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)