Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_M18
(489 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z75547-1|CAA99908.2| 621|Caenorhabditis elegans Hypothetical pr... 28 4.2
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 28 4.2
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 28 4.2
AL034489-5|CAA22467.1| 383|Caenorhabditis elegans Hypothetical ... 27 7.3
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 27 9.7
>Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +3
Query: 33 EIDAPVDEATTDNAATELRSGGKNKK-RAPWKGKTE-FSHPWLLKNLKGHPGTVLLVDFS 206
E+D +DE T + E K+++ WK K F HPW + LKGH V V F+
Sbjct: 41 EVDVVMDEVTETIISEEPVKKNKHQRTNDQWKAKEPTFVHPWNVSVLKGHKKEVTDVAFA 100
Query: 207 ANG-KFMAATCDETV 248
++G KF++ + D +V
Sbjct: 101 SDGKKFVSISGDRSV 115
>Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +3
Query: 33 EIDAPVDEATTDNAATELRSGGKNKK-RAPWKGKTE-FSHPWLLKNLKGHPGTVLLVDFS 206
E+D +DE T + E K+++ WK K F HPW + LKGH V V F+
Sbjct: 41 EVDVVMDEVTETIISEEPVKKNKHQRTNDQWKAKEPTFVHPWNVSVLKGHKKEVTDVAFA 100
Query: 207 ANG-KFMAATCDETV 248
++G KF++ + D +V
Sbjct: 101 SDGKKFVSISGDRSV 115
>Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +3
Query: 33 EIDAPVDEATTDNAATELRSGGKNKK-RAPWKGKTE-FSHPWLLKNLKGHPGTVLLVDFS 206
E+D +DE T + E K+++ WK K F HPW + LKGH V V F+
Sbjct: 41 EVDVVMDEVTETIISEEPVKKNKHQRTNDQWKAKEPTFVHPWNVSVLKGHKKEVTDVAFA 100
Query: 207 ANG-KFMAATCDETV 248
++G KF++ + D +V
Sbjct: 101 SDGKKFVSISGDRSV 115
>Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical
protein R11D1.1b protein.
Length = 622
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 129 KTEFSH-PWLLKNLKGHPGTVLLVDFSANGKFMAATCDE 242
+ +F H P+ K+++ H G + + FS N +F+A+ D+
Sbjct: 49 RPDFQHRPFCQKDVREHTGCINALQFSHNDRFLASGGDD 87
>Z75547-1|CAA99908.2| 621|Caenorhabditis elegans Hypothetical
protein R11D1.1a protein.
Length = 621
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 129 KTEFSH-PWLLKNLKGHPGTVLLVDFSANGKFMAATCD 239
+ +F H P+ K+++ H G + + FS N +F+A+ D
Sbjct: 49 RPDFQHRPFCQKDVREHTGCINALQFSHNDRFLASGDD 86
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 165 LKGHPGTVLLVDFSANGKFMAA 230
L+GH VL V++S NGK++A+
Sbjct: 129 LRGHSMEVLTVEWSPNGKYLAS 150
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 165 LKGHPGTVLLVDFSANGKFMAA 230
L+GH VL V++S NGK++A+
Sbjct: 417 LRGHSMEVLTVEWSPNGKYLAS 438
>AL034489-5|CAA22467.1| 383|Caenorhabditis elegans Hypothetical
protein Y7A5A.7 protein.
Length = 383
Score = 27.1 bits (57), Expect = 7.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 67 ITQRPNFVVVVKTRNAHLGKERQNLVTRGFSRISRVIRALFYSSISLLTASS-WPLPVMR 243
+TQ P F + + T N H NL T ++ AL ++ LTA + PLPV+
Sbjct: 303 VTQLPQFHIPIPTMNLH------NLSTNTLPDLTTFDPALLNLLLAQLTAQNIAPLPVVA 356
Query: 244 PS 249
P+
Sbjct: 357 PN 358
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 57 ATTDNAATELRSGGKNKKRAPWKGKTEFSHPWLLKNLKG 173
+T TE + K R WKG TE+++P LKG
Sbjct: 248 STRRPTTTEEPTTTSRKPRPGWKGDTEYNYPERNLPLKG 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,079,926
Number of Sequences: 27780
Number of extensions: 172842
Number of successful extensions: 555
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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