Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_M16
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0428 + 3055163-3055573 249 1e-66
06_01_0427 - 3054204-3054614 249 1e-66
06_01_0423 - 3039527-3039937 249 1e-66
05_04_0449 - 21355439-21355849 249 1e-66
04_03_0909 + 20748653-20749063 249 1e-66
01_06_1456 + 37507156-37507566 249 1e-66
06_01_0217 - 1644696-1645034,1645143-1645214 248 3e-66
11_01_0348 - 2607315-2607424,2608634-2609030 244 6e-65
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 233 8e-62
06_01_0425 - 3045557-3046004,3046852-3046856 230 8e-61
12_02_0048 - 12852335-12852745 204 3e-53
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 199 1e-51
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 196 1e-50
12_02_0047 - 12836779-12837189 193 1e-49
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 132 2e-31
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 126 2e-29
04_02_0033 - 8997041-8997754 32 0.43
10_02_0068 + 4888273-4889266,4889375-4889397 30 1.7
03_01_0575 + 4247431-4247489,4248475-4248547,4248792-4249229,425... 29 3.0
06_03_0787 + 24598823-24598973,24600213-24600534,24602499-24602808 28 5.2
12_02_1043 - 25646075-25646437,25646655-25647959,25648394-25648648 28 6.9
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 28 6.9
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 28 6.9
03_06_0307 + 33027012-33027167,33028505-33028615,33028927-330290... 27 9.2
>06_01_0428 + 3055163-3055573
Length = 136
Score = 249 bits (610), Expect = 1e-66
Identities = 120/127 (94%), Positives = 126/127 (99%)
Frame = +2
Query: 11 KSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 190
KSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQ
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQ 69
Query: 191 RLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 370
RLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR
Sbjct: 70 RLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 129
Query: 371 RIRGERA 391
RIRGERA
Sbjct: 130 RIRGERA 136
>06_01_0427 - 3054204-3054614
Length = 136
Score = 249 bits (610), Expect = 1e-66
Identities = 120/127 (94%), Positives = 126/127 (99%)
Frame = +2
Query: 11 KSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 190
KSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQ
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQ 69
Query: 191 RLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 370
RLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR
Sbjct: 70 RLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 129
Query: 371 RIRGERA 391
RIRGERA
Sbjct: 130 RIRGERA 136
>06_01_0423 - 3039527-3039937
Length = 136
Score = 249 bits (610), Expect = 1e-66
Identities = 120/127 (94%), Positives = 126/127 (99%)
Frame = +2
Query: 11 KSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 190
KSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQ
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQ 69
Query: 191 RLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 370
RLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR
Sbjct: 70 RLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 129
Query: 371 RIRGERA 391
RIRGERA
Sbjct: 130 RIRGERA 136
>05_04_0449 - 21355439-21355849
Length = 136
Score = 249 bits (610), Expect = 1e-66
Identities = 120/127 (94%), Positives = 126/127 (99%)
Frame = +2
Query: 11 KSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 190
KSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQ
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQ 69
Query: 191 RLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 370
RLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR
Sbjct: 70 RLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 129
Query: 371 RIRGERA 391
RIRGERA
Sbjct: 130 RIRGERA 136
>04_03_0909 + 20748653-20749063
Length = 136
Score = 249 bits (610), Expect = 1e-66
Identities = 120/127 (94%), Positives = 126/127 (99%)
Frame = +2
Query: 11 KSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 190
KSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQ
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQ 69
Query: 191 RLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 370
RLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR
Sbjct: 70 RLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 129
Query: 371 RIRGERA 391
RIRGERA
Sbjct: 130 RIRGERA 136
>01_06_1456 + 37507156-37507566
Length = 136
Score = 249 bits (610), Expect = 1e-66
Identities = 120/127 (94%), Positives = 126/127 (99%)
Frame = +2
Query: 11 KSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 190
KSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQ
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQ 69
Query: 191 RLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 370
RLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR
Sbjct: 70 RLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 129
Query: 371 RIRGERA 391
RIRGERA
Sbjct: 130 RIRGERA 136
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 248 bits (607), Expect = 3e-66
Identities = 121/127 (95%), Positives = 125/127 (98%)
Frame = +2
Query: 11 KSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 190
KSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQ
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQ 69
Query: 191 RLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 370
RLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR
Sbjct: 70 RLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 129
Query: 371 RIRGERA 391
RIRGERA
Sbjct: 130 RIRGERA 136
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 244 bits (596), Expect = 6e-65
Identities = 117/124 (94%), Positives = 123/124 (99%)
Frame = +2
Query: 11 KSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 190
KSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQ
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQ 69
Query: 191 RLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 370
RLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR
Sbjct: 70 RLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 129
Query: 371 RIRG 382
RIRG
Sbjct: 130 RIRG 133
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 233 bits (570), Expect = 8e-62
Identities = 121/141 (85%), Positives = 125/141 (88%), Gaps = 14/141 (9%)
Frame = +2
Query: 11 KSTGGKAPRKQLATK--------------AARKSAPSTGGVKKPHRYRPGTVALREIRRY 148
KSTGGKAPRKQLATK AARKSAP+TGGVKKPHRYRPGTVALREIR+Y
Sbjct: 10 KSTGGKAPRKQLATKSDFDRWSYITISVQAARKSAPTTGGVKKPHRYRPGTVALREIRKY 69
Query: 149 QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHA 328
QKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHA
Sbjct: 70 QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHA 129
Query: 329 KRVTIMPKDIQLARRIRGERA 391
KRVTIMPKDIQLARRIRGERA
Sbjct: 130 KRVTIMPKDIQLARRIRGERA 150
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 230 bits (562), Expect = 8e-61
Identities = 112/130 (86%), Positives = 119/130 (91%)
Frame = +2
Query: 2 HEGKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKL 181
HE + RKQLATKA KSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKL
Sbjct: 21 HEADGVQVRDSRKQLATKATCKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKL 80
Query: 182 PFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 361
PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct: 81 PFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 140
Query: 362 LARRIRGERA 391
LARRIRGERA
Sbjct: 141 LARRIRGERA 150
>12_02_0048 - 12852335-12852745
Length = 136
Score = 204 bits (499), Expect = 3e-53
Identities = 98/127 (77%), Positives = 111/127 (87%)
Frame = +2
Query: 11 KSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 190
KST PRK L K ARKSAP+ G+KKPHR++PGTVALREIR YQKSTELLIRKLPFQ
Sbjct: 10 KSTASNVPRKLLVMKVARKSAPTMAGLKKPHRFKPGTVALREIRTYQKSTELLIRKLPFQ 69
Query: 191 RLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 370
RLV+EIAQD ++ +RFQS+A+ ALQEA+E YLVGLF+DTNLC IHAKRVTIMPKDIQLAR
Sbjct: 70 RLVQEIAQDVRSYVRFQSSAVVALQEAAETYLVGLFKDTNLCVIHAKRVTIMPKDIQLAR 129
Query: 371 RIRGERA 391
RIRGE+A
Sbjct: 130 RIRGEKA 136
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 199 bits (486), Expect = 1e-51
Identities = 97/111 (87%), Positives = 104/111 (93%)
Frame = +2
Query: 56 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 235
AARKSAP GGVKKPHRYRPGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+R
Sbjct: 4 AARKSAPCIGGVKKPHRYRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQLFKHDMR 63
Query: 236 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 388
FQS A+ ALQEA+EAYLVGLFEDTNLCAIH+KRVTIM KD+QLARRIRGER
Sbjct: 64 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 114
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 196 bits (478), Expect = 1e-50
Identities = 103/136 (75%), Positives = 112/136 (82%), Gaps = 10/136 (7%)
Frame = +2
Query: 11 KSTGGKAPRKQLATKAARKSAPSTGGV----------KKPHRYRPGTVALREIRRYQKST 160
KSTGGKAPRK L AA APS+ GV KKP R+RPGTVALREIR+YQK+T
Sbjct: 75 KSTGGKAPRKPLRAIAAVMPAPSSRGVARKSVPFIGVKKPRRHRPGTVALREIRKYQKNT 134
Query: 161 ELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVT 340
ELLIRKLPFQRLVREIAQ FK D+RFQS A+ ALQEA+EAYLVGLFEDTNLCAIH+KRVT
Sbjct: 135 ELLIRKLPFQRLVREIAQHFKHDMRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHSKRVT 194
Query: 341 IMPKDIQLARRIRGER 388
IM KD+QLARRIRGER
Sbjct: 195 IMSKDVQLARRIRGER 210
>12_02_0047 - 12836779-12837189
Length = 136
Score = 193 bits (470), Expect = 1e-49
Identities = 94/127 (74%), Positives = 104/127 (81%)
Frame = +2
Query: 11 KSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 190
KST G PRK L K ARKSAP G+KKPHR+ P VALREIR YQKSTELLIRKLPFQ
Sbjct: 10 KSTAGNVPRKLLVMKVARKSAPMMAGLKKPHRFNPWIVALREIRTYQKSTELLIRKLPFQ 69
Query: 191 RLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 370
RLV+EI QD ++ +RFQS+A+ LQEA+E YLVGLFEDTNLC IHAKRVTIMPKDIQLAR
Sbjct: 70 RLVQEITQDIRSYVRFQSSAMAVLQEAAETYLVGLFEDTNLCVIHAKRVTIMPKDIQLAR 129
Query: 371 RIRGERA 391
I GE+A
Sbjct: 130 CIGGEKA 136
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 132 bits (320), Expect = 2e-31
Identities = 71/122 (58%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Frame = +2
Query: 26 KAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 205
++PR A +A T +KPHR+RPGTVALREIR++QK+TELLI PF RLVRE
Sbjct: 24 RSPRPSKAQRAGGTPRQQTKQ-RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVRE 82
Query: 206 IAQDFKTDL-RFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 382
I + D+ R+ A+ ALQEA+E +LV +FE +NLCAIHAKRVTIM KD+QLARRI G
Sbjct: 83 ITDFYSKDVSRWTLEALLALQEAAEYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGG 142
Query: 383 ER 388
R
Sbjct: 143 RR 144
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 126 bits (303), Expect = 2e-29
Identities = 79/127 (62%), Positives = 87/127 (68%)
Frame = +2
Query: 11 KSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 190
KSTGGKAPRKQLATKAARKSAP+ T +++ RY P++
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPT-------------TGGVKKPHRYP----------PWK 46
Query: 191 RLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 370
R TDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR
Sbjct: 47 RCS-------STDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 99
Query: 371 RIRGERA 391
RIRGERA
Sbjct: 100 RIRGERA 106
>04_02_0033 - 8997041-8997754
Length = 237
Score = 31.9 bits (69), Expect = 0.43
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 303 TPTFAPSTPNA*PLCLKTSSSPG 371
TPT PSTPN P C++ +PG
Sbjct: 156 TPTATPSTPNGDPFCIRGVRTPG 178
>10_02_0068 + 4888273-4889266,4889375-4889397
Length = 338
Score = 29.9 bits (64), Expect = 1.7
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = -1
Query: 397 NLSTLSADSPGELDVFRHNGYAFGVDGAKVGVFKQTHQIGFTGLLQSANGSRLETKIGFK 218
NLST + + + NGY FG VGV QT++ +T L + +R E ++
Sbjct: 74 NLSTTPPATAAGTIILKGNGYYFGDQENPVGV--QTNKSWWTVDLIDIDVTRGEVRVAVP 131
Query: 217 VLSNFS-NESLERQLADQQLRRFLIATNFSKRYSTRAITMG 98
V S+ S NES Q F FS +TR + +G
Sbjct: 132 VSSDCSTNESYHELSIFTQSLNFSTTFLFS---ATRNVLLG 169
>03_01_0575 +
4247431-4247489,4248475-4248547,4248792-4249229,
4252122-4253339
Length = 595
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 110 RPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV 289
RP V L + Y+ + EL + K F L R+ + + L FQS + E+Y+
Sbjct: 171 RPRPVYLIDFACYKPADELKVSKAEFIDLARKSGKFDEDSLAFQSRLLAKSGIGDESYMP 230
Query: 290 G-LFEDTNLCA 319
+FE CA
Sbjct: 231 RCVFEPGTNCA 241
>06_03_0787 + 24598823-24598973,24600213-24600534,24602499-24602808
Length = 260
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 367 GELDVFRHNGYAFGVDGAKVG 305
G+LD+FR+ Y GV GA G
Sbjct: 58 GDLDIFRYGRYTAGVSGALFG 78
>12_02_1043 - 25646075-25646437,25646655-25647959,25648394-25648648
Length = 640
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +2
Query: 245 AAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*INVLYHILLI 424
AA+G Y L +L H +MP+D+ LA + G L L
Sbjct: 409 AAVGRRDLFDAPYTTQLLRSCSLAVGHLDMELVMPEDMALANWLGGGGGACEDLIRHLPE 468
Query: 425 LIRIDVRSLHI 457
L R+ V SL+I
Sbjct: 469 LPRVTVLSLNI 479
>02_05_1052 + 33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 27.9 bits (59), Expect = 6.9
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 8/104 (7%)
Frame = +2
Query: 23 GKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI--RRYQKSTELLIRKLPFQR- 193
G +PR++LA+ ST K HR + ALR + R S + + L F
Sbjct: 744 GTSPRRRLASDGVNALLKSTDFTDKDHRPSTSSAALRGMSPRNRVTSKSIDAKSLDFSDK 803
Query: 194 -----LVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTN 310
+Q ++ S I AL EA + ++G + T+
Sbjct: 804 DSRPFTPSGASQGTLQEVALASDGINALSEAVDTAVIGSLQSTS 847
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 20 GGKAPRKQLATKAARKSAPSTGGVKKPHRYRP 115
GG+ P + LA+ A SA + GG ++P + P
Sbjct: 26 GGRDPLRALASLAGDASASAGGGARRPAWFAP 57
>03_06_0307 +
33027012-33027167,33028505-33028615,33028927-33029065,
33029215-33029323,33029422-33029425
Length = 172
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 68 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRK-LPFQRLVREIAQDFKTDLRFQS 244
SA S G + R R ++ +STE L+RK +R++R + + +++ S
Sbjct: 16 SASSAGAAAERKRKRAAAAKTVSLKNQIRSTERLLRKRRKIERMIRRLEKQQRSNADDAS 75
Query: 245 AAIGALQEASE 277
+ L+E E
Sbjct: 76 NKLSKLKEDLE 86
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,510,634
Number of Sequences: 37544
Number of extensions: 308335
Number of successful extensions: 878
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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